RNA–Protein interactions for RNA: ENST00000531034.1

PTP4A1P6-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 6, humanhuman

BASIC

Gene PTP4A1P6, Length 478 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P6-201ENST00000531034 PHF14O94880 888 aa8.29□□□□□ -1.08
PTP4A1P6-201ENST00000531034 PRKCSHP14314 528 aaPredicted RBP8.29□□□□□ -1.08
PTP4A1P6-201ENST00000531034 TYW1BQ6NUM6 668 aa8.28□□□□□ -1.08
PTP4A1P6-201ENST00000531034 DAXXQ9UER7 740 aaPredicted RBP8.28□□□□□ -1.08
PTP4A1P6-201ENST00000531034 A0A0G2JS52 829 aa8.27□□□□□ -1.09
PTP4A1P6-201ENST00000531034 GTPBP6O43824 516 aaPredicted RBP8.27□□□□□ -1.09
PTP4A1P6-201ENST00000531034 EPAS1Q99814 870 aa8.27□□□□□ -1.09
PTP4A1P6-201ENST00000531034 ADAM33Q9BZ11 813 aa8.27□□□□□ -1.09
PTP4A1P6-201ENST00000531034 IRX2Q9BZI1 471 aaPredicted RBP8.24□□□□□ -1.09
PTP4A1P6-201ENST00000531034 ITGBL1O95965 494 aaPredicted RBP8.23□□□□□ -1.09
PTP4A1P6-201ENST00000531034 HAP1P54257 671 aaPredicted RBP8.22□□□□□ -1.09
PTP4A1P6-201ENST00000531034 PCDHGA10Q9Y5H3 936 aa8.22□□□□□ -1.09
PTP4A1P6-201ENST00000531034 SOWAHBA6NEL2 793 aa8.2□□□□□ -1.1
PTP4A1P6-201ENST00000531034 DCAF8L2P0C7V8 631 aa8.2□□□□□ -1.1
PTP4A1P6-201ENST00000531034 VSIG10Q8N0Z9 540 aa8.19□□□□□ -1.1
PTP4A1P6-201ENST00000531034 CAMK2BQ13554 666 aa8.18□□□□□ -1.1
PTP4A1P6-201ENST00000531034 EMILIN3Q9NT22 766 aa8.18□□□□□ -1.1
PTP4A1P6-201ENST00000531034 FAM98CQ17RN3 349 aaKnown RBP8.17□□□□□ -1.1
PTP4A1P6-201ENST00000531034 LAPTM4AQ15012 233 aa8.16□□□□□ -1.1
PTP4A1P6-201ENST00000531034 ZFRQ96KR1 1074 aaKnown RBP8.16□□□□□ -1.1
PTP4A1P6-201ENST00000531034 KCNC4Q03721 635 aa8.15□□□□□ -1.1
PTP4A1P6-201ENST00000531034 C6orf132Q5T0Z8 1188 aa8.15□□□□□ -1.1
PTP4A1P6-201ENST00000531034 CERKQ8TCT0 537 aa8.15□□□□□ -1.1
PTP4A1P6-201ENST00000531034 ARXQ96QS3 562 aa8.15□□□□□ -1.1
PTP4A1P6-201ENST00000531034 TRIM6-TRIM34B2RNG4 842 aa8.14□□□□□ -1.11
PTP4A1P6-201ENST00000531034 PACS2Q86VP3 889 aa8.14□□□□□ -1.11
PTP4A1P6-201ENST00000531034 NECTIN2Q92692 538 aa8.14□□□□□ -1.11
PTP4A1P6-201ENST00000531034 LRCH3Q96II8 777 aa8.14□□□□□ -1.11
PTP4A1P6-201ENST00000531034 KIAA1468Q9P260 1216 aa8.14□□□□□ -1.11
PTP4A1P6-201ENST00000531034 TSR3Q9UJK0 312 aaKnown RBP8.14□□□□□ -1.11
PTP4A1P6-201ENST00000531034 SPDYE16A6NNV3 312 aaPredicted RBP8.13□□□□□ -1.11
PTP4A1P6-201ENST00000531034 PROX2Q3B8N5 592 aa8.13□□□□□ -1.11
PTP4A1P6-201ENST00000531034 TPRNQ4KMQ1 711 aa8.13□□□□□ -1.11
PTP4A1P6-201ENST00000531034 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.13□□□□□ -1.11
PTP4A1P6-201ENST00000531034 COL9A1P20849 921 aa8.12□□□□□ -1.11
PTP4A1P6-201ENST00000531034 BCAMP50895 628 aa8.1□□□□□ -1.11
PTP4A1P6-201ENST00000531034 DPYSL4O14531 572 aa8.08□□□□□ -1.12
PTP4A1P6-201ENST00000531034 HDGFP51858 240 aaKnown RBP8.08□□□□□ -1.12
PTP4A1P6-201ENST00000531034 EN1Q05925 392 aaPredicted RBP8.08□□□□□ -1.12
PTP4A1P6-201ENST00000531034 PDIA6Q15084 440 aa8.08□□□□□ -1.12
PTP4A1P6-201ENST00000531034 BBXQ8WY36 941 aaPredicted RBP8.08□□□□□ -1.12
PTP4A1P6-201ENST00000531034 ERICH6Q7L0X2 663 aa8.07□□□□□ -1.12
PTP4A1P6-201ENST00000531034 MAP3K7O43318 606 aa8.06□□□□□ -1.12
PTP4A1P6-201ENST00000531034 PPP4CP60510 307 aa8.06□□□□□ -1.12
PTP4A1P6-201ENST00000531034 WBP1LQ9NX94 342 aa8.06□□□□□ -1.12
PTP4A1P6-201ENST00000531034 HPS5Q9UPZ3 1129 aa8.06□□□□□ -1.12
PTP4A1P6-201ENST00000531034 NBPF26B4DH59 902 aa8.05□□□□□ -1.12
PTP4A1P6-201ENST00000531034 SLC4A3P48751 1232 aa8.05□□□□□ -1.12
PTP4A1P6-201ENST00000531034 NBR1Q14596 966 aa8.05□□□□□ -1.12
PTP4A1P6-201ENST00000531034 RBM27Q9P2N5 1060 aaKnown RBP8.05□□□□□ -1.12
PTP4A1P6-201ENST00000531034 SEPT9Q9UHD8 586 aaPredicted RBP8.05□□□□□ -1.12
PTP4A1P6-201ENST00000531034 CADPS2Q86UW7 1296 aa8.04□□□□□ -1.12
PTP4A1P6-201ENST00000531034 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.04□□□□□ -1.12
PTP4A1P6-201ENST00000531034 ARIH1Q9Y4X5 557 aaPredicted RBP8.04□□□□□ -1.12
PTP4A1P6-201ENST00000531034 Q6ZNB5 142 aa8.03□□□□□ -1.12
PTP4A1P6-201ENST00000531034 DDX12PQ92771 950 aa8.03□□□□□ -1.12
PTP4A1P6-201ENST00000531034 RBM33Q96EV2 1170 aaKnown RBP8.03□□□□□ -1.12
PTP4A1P6-201ENST00000531034 TIMELESSQ9UNS1 1208 aa8.03□□□□□ -1.12
PTP4A1P6-201ENST00000531034 WDR70Q9NW82 654 aa8.02□□□□□ -1.13
PTP4A1P6-201ENST00000531034 PRSS12P56730 875 aa8□□□□□ -1.13
PTP4A1P6-201ENST00000531034 SPRYD3Q8NCJ5 442 aa8□□□□□ -1.13
PTP4A1P6-201ENST00000531034 GGCXP38435 758 aa7.99□□□□□ -1.13
PTP4A1P6-201ENST00000531034 E2F4Q16254 413 aa7.99□□□□□ -1.13
PTP4A1P6-201ENST00000531034 CDCA7LQ96GN5 454 aa7.99□□□□□ -1.13
PTP4A1P6-201ENST00000531034 PRR14Q9BWN1 585 aa7.99□□□□□ -1.13
PTP4A1P6-201ENST00000531034 IL21Q9HBE4 155 aa7.99□□□□□ -1.13
PTP4A1P6-201ENST00000531034 V9GY48 417 aaPredicted RBP7.98□□□□□ -1.13
PTP4A1P6-201ENST00000531034 TSKSQ9UJT2 592 aa7.97□□□□□ -1.13
PTP4A1P6-201ENST00000531034 TULP1O00294 542 aaPredicted RBP7.96□□□□□ -1.14
PTP4A1P6-201ENST00000531034 SLF2Q8IX21 1173 aa7.95□□□□□ -1.14
PTP4A1P6-201ENST00000531034 NRG2O14511 850 aaPredicted RBP7.94□□□□□ -1.14
PTP4A1P6-201ENST00000531034 TSR1Q2NL82 804 aaKnown RBP7.94□□□□□ -1.14
PTP4A1P6-201ENST00000531034 SAMD7Q7Z3H4 446 aa7.94□□□□□ -1.14
PTP4A1P6-201ENST00000531034 TATDN2Q93075 761 aa7.94□□□□□ -1.14
PTP4A1P6-201ENST00000531034 PNMA3Q9UL41 463 aa7.94□□□□□ -1.14
PTP4A1P6-201ENST00000531034 TJAP1Q5JTD0 557 aa7.92□□□□□ -1.14
PTP4A1P6-201ENST00000531034 TMUB1Q9BVT8 246 aa7.92□□□□□ -1.14
PTP4A1P6-201ENST00000531034 KDM2AQ9Y2K7 1162 aa7.92□□□□□ -1.14
PTP4A1P6-201ENST00000531034 GFRA3O60609 400 aa7.91□□□□□ -1.14
PTP4A1P6-201ENST00000531034 HOMEZQ8IX15 550 aa7.91□□□□□ -1.14
PTP4A1P6-201ENST00000531034 MTRQ99707 1265 aa7.91□□□□□ -1.14
PTP4A1P6-201ENST00000531034 TRAF7Q6Q0C0 670 aa7.9□□□□□ -1.14
PTP4A1P6-201ENST00000531034 GTF3C3Q9Y5Q9 886 aa7.9□□□□□ -1.14
PTP4A1P6-201ENST00000531034 GRXCR2A6NFK2 248 aa7.89□□□□□ -1.15
PTP4A1P6-201ENST00000531034 PRKD2Q9BZL6 878 aa7.89□□□□□ -1.15
PTP4A1P6-201ENST00000531034 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.89□□□□□ -1.15
PTP4A1P6-201ENST00000531034 RNF40O75150 1001 aa7.88□□□□□ -1.15
PTP4A1P6-201ENST00000531034 PPP1R18Q6NYC8 613 aa7.87□□□□□ -1.15
PTP4A1P6-201ENST00000531034 NUDT18Q6ZVK8 323 aa7.87□□□□□ -1.15
PTP4A1P6-201ENST00000531034 OSBPP22059 807 aa7.85□□□□□ -1.15
PTP4A1P6-201ENST00000531034 SMAPO00193 183 aa7.84□□□□□ -1.15
PTP4A1P6-201ENST00000531034 TTC13Q8NBP0 860 aa7.84□□□□□ -1.15
PTP4A1P6-201ENST00000531034 APLP1P51693 650 aa7.82□□□□□ -1.16
PTP4A1P6-201ENST00000531034 FAM198AQ9UFP1 575 aa7.82□□□□□ -1.16
PTP4A1P6-201ENST00000531034 PDZRN3Q9UPQ7 1066 aa7.81□□□□□ -1.16
PTP4A1P6-201ENST00000531034 ZPR1O75312 459 aa7.8□□□□□ -1.16
PTP4A1P6-201ENST00000531034 DNAJB2P25686 324 aa7.8□□□□□ -1.16
PTP4A1P6-201ENST00000531034 KMT5BQ4FZB7 885 aa7.8□□□□□ -1.16
PTP4A1P6-201ENST00000531034 RBM46Q8TBY0 533 aaKnown RBP7.8□□□□□ -1.16
PTP4A1P6-201ENST00000531034 ARHGEF1Q92888 912 aaKnown RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms