RNA–Protein interactions for RNA: ENST00000530866.5

LTBP3-218, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 3,756 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-218ENST00000530866 PANK3Q9H999 370 aa16.71■□□□□ 0.26
LTBP3-218ENST00000530866 CFAP43Q8NDM7 1665 aa16.7■□□□□ 0.26
LTBP3-218ENST00000530866 CCDC144AA2RUR9 1427 aa16.7■□□□□ 0.26
LTBP3-218ENST00000530866 RSPH4AQ5TD94 716 aa16.7■□□□□ 0.26
LTBP3-218ENST00000530866 STK26Q9P289 416 aa16.69■□□□□ 0.26
LTBP3-218ENST00000530866 UGGT2Q9NYU1 1516 aa16.69■□□□□ 0.26
LTBP3-218ENST00000530866 C9orf84Q5VXU9 1444 aa16.69■□□□□ 0.26
LTBP3-218ENST00000530866 PBRM1Q86U86 1689 aa16.69■□□□□ 0.26
LTBP3-218ENST00000530866 TMF1P82094 1093 aa16.68■□□□□ 0.26
LTBP3-218ENST00000530866 SLC24A1O60721 1099 aa16.68■□□□□ 0.26
LTBP3-218ENST00000530866 CAMSAP2Q08AD1 1489 aa16.68■□□□□ 0.26
LTBP3-218ENST00000530866 EXOC6Q8TAG9 804 aa16.68■□□□□ 0.26
LTBP3-218ENST00000530866 NUDCQ9Y266 331 aa16.68■□□□□ 0.26
LTBP3-218ENST00000530866 NCOA1Q15788 1441 aa16.67■□□□□ 0.26
LTBP3-218ENST00000530866 CCDC146Q8IYE0 955 aa16.67■□□□□ 0.26
LTBP3-218ENST00000530866 SKAP1Q86WV1 359 aa16.67■□□□□ 0.26
LTBP3-218ENST00000530866 NAP1L5Q96NT1 182 aaPredicted RBP16.67■□□□□ 0.26
LTBP3-218ENST00000530866 AKNAQ7Z591 1439 aa16.66■□□□□ 0.26
LTBP3-218ENST00000530866 CNTLNQ9NXG0 1405 aa16.66■□□□□ 0.26
LTBP3-218ENST00000530866 CDCA7LQ96GN5 454 aa16.65■□□□□ 0.26
LTBP3-218ENST00000530866 RCAN3Q9UKA8 241 aa16.65■□□□□ 0.26
LTBP3-218ENST00000530866 TRAK1Q9UPV9 953 aa16.65■□□□□ 0.26
LTBP3-218ENST00000530866 DISP1Q96F81 1524 aa16.65■□□□□ 0.26
LTBP3-218ENST00000530866 KDM6BO15054 1643 aa16.64■□□□□ 0.25
LTBP3-218ENST00000530866 PPM1GO15355 546 aaPredicted RBP16.64■□□□□ 0.25
LTBP3-218ENST00000530866 GPATCH8Q9UKJ3 1502 aaKnown RBP16.63■□□□□ 0.25
LTBP3-218ENST00000530866 ZBED9Q6R2W3 1325 aa16.63■□□□□ 0.25
LTBP3-218ENST00000530866 ARHGAP5Q13017 1502 aa16.63■□□□□ 0.25
LTBP3-218ENST00000530866 FRAT1Q92837 279 aaPredicted RBP16.62■□□□□ 0.25
LTBP3-218ENST00000530866 KIAA1107Q9UPP5 1409 aa16.62■□□□□ 0.25
LTBP3-218ENST00000530866 NUP160Q12769 1436 aa16.61■□□□□ 0.25
LTBP3-218ENST00000530866 KIAA0556O60303 1618 aa16.61■□□□□ 0.25
LTBP3-218ENST00000530866 SLC4A3P48751 1232 aa16.6■□□□□ 0.25
LTBP3-218ENST00000530866 ATP10BO94823 1461 aa16.59■□□□□ 0.25
LTBP3-218ENST00000530866 TRHP20396 242 aaPredicted RBP16.59■□□□□ 0.25
LTBP3-218ENST00000530866 KTN1Q86UP2 1357 aaKnown RBP16.59■□□□□ 0.25
LTBP3-218ENST00000530866 TMEM132EQ6IEE7 984 aa16.58■□□□□ 0.25
LTBP3-218ENST00000530866 AMER1Q5JTC6 1135 aaPredicted RBP16.58■□□□□ 0.24
LTBP3-218ENST00000530866 SAMD9Q5K651 1589 aa16.57■□□□□ 0.24
LTBP3-218ENST00000530866 PAK3O75914 559 aaPredicted RBP16.57■□□□□ 0.24
LTBP3-218ENST00000530866 CFAP70Q5T0N1 1121 aa16.57■□□□□ 0.24
LTBP3-218ENST00000530866 CEP170Q5SW79 1584 aa16.57■□□□□ 0.24
LTBP3-218ENST00000530866 KANK1Q14678 1352 aa16.57■□□□□ 0.24
LTBP3-218ENST00000530866 RAPGEF6Q8TEU7 1601 aa16.56■□□□□ 0.24
LTBP3-218ENST00000530866 BRPF3Q9ULD4 1205 aa16.56■□□□□ 0.24
LTBP3-218ENST00000530866 FANCIQ9NVI1 1328 aa16.55■□□□□ 0.24
LTBP3-218ENST00000530866 ROCK1Q13464 1354 aa16.55■□□□□ 0.24
LTBP3-218ENST00000530866 FAM69CQ0P6D2 419 aa16.55■□□□□ 0.24
LTBP3-218ENST00000530866 NLRP13Q86W25 1043 aa16.55■□□□□ 0.24
LTBP3-218ENST00000530866 RPRD2Q5VT52 1461 aaKnown RBP16.54■□□□□ 0.24
LTBP3-218ENST00000530866 RRP7AQ9Y3A4 280 aaKnown RBP16.54■□□□□ 0.24
LTBP3-218ENST00000530866 WASHC2CQ9Y4E1 1318 aa16.54■□□□□ 0.24
LTBP3-218ENST00000530866 RAPGEF3O95398 923 aa16.53■□□□□ 0.24
LTBP3-218ENST00000530866 SCAPERQ9BY12 1400 aa16.52■□□□□ 0.24
LTBP3-218ENST00000530866 MYBBP1AQ9BQG0 1328 aaKnown RBP16.52■□□□□ 0.24
LTBP3-218ENST00000530866 RALBP1Q15311 655 aa16.51■□□□□ 0.23
LTBP3-218ENST00000530866 KIF14Q15058 1648 aa16.51■□□□□ 0.23
LTBP3-218ENST00000530866 SOX12O15370 315 aa16.51■□□□□ 0.23
LTBP3-218ENST00000530866 CRBNQ96SW2 442 aa16.5■□□□□ 0.23
LTBP3-218ENST00000530866 U2SURPO15042 1029 aaKnown RBP16.5■□□□□ 0.23
LTBP3-218ENST00000530866 SRPK2P78362 688 aaKnown RBP16.5■□□□□ 0.23
LTBP3-218ENST00000530866 PLEKHH2Q8IVE3 1493 aa16.5■□□□□ 0.23
LTBP3-218ENST00000530866 PNISRQ8TF01 805 aaKnown RBP16.49■□□□□ 0.23
LTBP3-218ENST00000530866 BCL2L13Q9BXK5 485 aa16.49■□□□□ 0.23
LTBP3-218ENST00000530866 RRP1P56182 461 aaKnown RBP16.48■□□□□ 0.23
LTBP3-218ENST00000530866 ARID3AQ99856 593 aa16.48■□□□□ 0.23
LTBP3-218ENST00000530866 NUTM2FA1L443 756 aa16.48■□□□□ 0.23
LTBP3-218ENST00000530866 SPRYD3Q8NCJ5 442 aa16.48■□□□□ 0.23
LTBP3-218ENST00000530866 CLUAP1Q96AJ1 413 aa16.48■□□□□ 0.23
LTBP3-218ENST00000530866 POGKQ9P215 609 aa16.48■□□□□ 0.23
LTBP3-218ENST00000530866 CDCA8Q53HL2 280 aa16.47■□□□□ 0.23
LTBP3-218ENST00000530866 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.47■□□□□ 0.23
LTBP3-218ENST00000530866 ADAMTS8Q9UP79 889 aa16.47■□□□□ 0.23
LTBP3-218ENST00000530866 TCOF1Q13428 1488 aaKnown RBP16.46■□□□□ 0.23
LTBP3-218ENST00000530866 MORC1Q86VD1 984 aa16.46■□□□□ 0.23
LTBP3-218ENST00000530866 APAF1O14727 1248 aa16.44■□□□□ 0.22
LTBP3-218ENST00000530866 ZMYND15Q9H091 742 aa16.44■□□□□ 0.22
LTBP3-218ENST00000530866 LRRIQ1Q96JM4 1722 aa16.44■□□□□ 0.22
LTBP3-218ENST00000530866 HSP90AA2PQ14568 343 aaPredicted RBP16.43■□□□□ 0.22
LTBP3-218ENST00000530866 PZPP20742 1482 aa16.43■□□□□ 0.22
LTBP3-218ENST00000530866 IPO9Q96P70 1041 aaKnown RBP16.43■□□□□ 0.22
LTBP3-218ENST00000530866 PDE4AP27815 886 aa16.42■□□□□ 0.22
LTBP3-218ENST00000530866 CCDC141Q6ZP82 1450 aa16.41■□□□□ 0.22
LTBP3-218ENST00000530866 DENND4BO75064 1496 aaPredicted RBP16.41■□□□□ 0.22
LTBP3-218ENST00000530866 SLC12A5Q9H2X9 1139 aa16.39■□□□□ 0.21
LTBP3-218ENST00000530866 HSP90AA1P07900 732 aaKnown RBP16.38■□□□□ 0.21
LTBP3-218ENST00000530866 U2AF1L5P0DN76 240 aaPredicted RBP16.38■□□□□ 0.21
LTBP3-218ENST00000530866 U2AF1Q01081 240 aaKnown RBP eCLIP16.38■□□□□ 0.21
LTBP3-218ENST00000530866 SYCP2Q9BX26 1530 aa16.38■□□□□ 0.21
LTBP3-218ENST00000530866 MINK1Q8N4C8 1332 aaPredicted RBP16.38■□□□□ 0.21
LTBP3-218ENST00000530866 RSPH6AQ9H0K4 717 aa16.38■□□□□ 0.21
LTBP3-218ENST00000530866 DISP3Q9P2K9 1392 aa16.37■□□□□ 0.21
LTBP3-218ENST00000530866 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.36■□□□□ 0.21
LTBP3-218ENST00000530866 C20orf194Q5TEA3 1177 aa16.36■□□□□ 0.21
LTBP3-218ENST00000530866 GOLGA2Q08379 1002 aa16.36■□□□□ 0.21
LTBP3-218ENST00000530866 SLKQ9H2G2 1235 aaPredicted RBP16.36■□□□□ 0.21
LTBP3-218ENST00000530866 TRAPPC8Q9Y2L5 1435 aa16.35■□□□□ 0.21
LTBP3-218ENST00000530866 ADGRF5Q8IZF2 1346 aa16.35■□□□□ 0.21
LTBP3-218ENST00000530866 CABP2Q9NPB3 220 aa16.35■□□□□ 0.21
LTBP3-218ENST00000530866 TEX14Q8IWB6 1497 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms