RNA–Protein interactions for RNA: ENST00000530309.1

CASP4-208, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-208ENST00000530309 TSR1Q2NL82 804 aaKnown RBP12.88□□□□□ -0.35
CASP4-208ENST00000530309 TRIM66O15016 1216 aa12.87□□□□□ -0.35
CASP4-208ENST00000530309 FECHP22830 423 aa12.87□□□□□ -0.35
CASP4-208ENST00000530309 IRF6O14896 467 aa12.86□□□□□ -0.35
CASP4-208ENST00000530309 LHX6Q9UPM6 363 aa12.86□□□□□ -0.35
CASP4-208ENST00000530309 HOXB1P14653 301 aaPredicted RBP12.85□□□□□ -0.35
CASP4-208ENST00000530309 C6orf132Q5T0Z8 1188 aa12.85□□□□□ -0.35
CASP4-208ENST00000530309 PSDA5PKW4 1024 aaPredicted RBP12.83□□□□□ -0.36
CASP4-208ENST00000530309 CCDC102AQ96A19 550 aa12.83□□□□□ -0.36
CASP4-208ENST00000530309 TMEM132AQ24JP5 1023 aa12.82□□□□□ -0.36
CASP4-208ENST00000530309 ADAM33Q9BZ11 813 aa12.82□□□□□ -0.36
CASP4-208ENST00000530309 CERKQ8TCT0 537 aa12.81□□□□□ -0.36
CASP4-208ENST00000530309 PDE4DQ08499 809 aa12.8□□□□□ -0.36
CASP4-208ENST00000530309 PPP4R3BQ5MIZ7 849 aa12.8□□□□□ -0.36
CASP4-208ENST00000530309 BCL2L12Q9HB09 334 aa12.76□□□□□ -0.37
CASP4-208ENST00000530309 GPBP1L1Q9HC44 474 aaPredicted RBP12.76□□□□□ -0.37
CASP4-208ENST00000530309 AMHR2Q16671 573 aa12.74□□□□□ -0.37
CASP4-208ENST00000530309 KDM4CQ9H3R0 1056 aa12.73□□□□□ -0.37
CASP4-208ENST00000530309 RBM27Q9P2N5 1060 aaKnown RBP12.72□□□□□ -0.37
CASP4-208ENST00000530309 PADI6Q6TGC4 694 aa12.71□□□□□ -0.37
CASP4-208ENST00000530309 PTPREP23469 700 aa12.7□□□□□ -0.38
CASP4-208ENST00000530309 PRSS12P56730 875 aa12.7□□□□□ -0.38
CASP4-208ENST00000530309 TTC13Q8NBP0 860 aa12.7□□□□□ -0.38
CASP4-208ENST00000530309 CDCA7LQ96GN5 454 aa12.69□□□□□ -0.38
CASP4-208ENST00000530309 OATP04181 439 aa12.68□□□□□ -0.38
CASP4-208ENST00000530309 COL9A1P20849 921 aa12.68□□□□□ -0.38
CASP4-208ENST00000530309 PARP9Q8IXQ6 854 aa12.68□□□□□ -0.38
CASP4-208ENST00000530309 PPP1R3GB7ZBB8 358 aa12.67□□□□□ -0.38
CASP4-208ENST00000530309 TTLL12Q14166 644 aaPredicted RBP12.66□□□□□ -0.38
CASP4-208ENST00000530309 DAXXQ9UER7 740 aaPredicted RBP12.66□□□□□ -0.38
CASP4-208ENST00000530309 ADGRG1Q9Y653 693 aa12.66□□□□□ -0.38
CASP4-208ENST00000530309 ST18O60284 1047 aa12.65□□□□□ -0.38
CASP4-208ENST00000530309 FAM161AQ3B820 660 aa12.65□□□□□ -0.38
CASP4-208ENST00000530309 METTL3Q86U44 580 aaKnown RBP12.64□□□□□ -0.39
CASP4-208ENST00000530309 ERBB3P21860 1342 aa12.63□□□□□ -0.39
CASP4-208ENST00000530309 PHOX2BQ99453 314 aa12.63□□□□□ -0.39
CASP4-208ENST00000530309 IL27Q8NEV9 243 aa12.62□□□□□ -0.39
CASP4-208ENST00000530309 KCNK17Q96T54 332 aa12.62□□□□□ -0.39
CASP4-208ENST00000530309 CLCN1P35523 988 aa12.61□□□□□ -0.39
CASP4-208ENST00000530309 VARS2Q5ST30 1063 aaKnown RBP12.61□□□□□ -0.39
CASP4-208ENST00000530309 PXYLP1Q8TE99 480 aa12.61□□□□□ -0.39
CASP4-208ENST00000530309 KCNH8Q96L42 1107 aa12.61□□□□□ -0.39
CASP4-208ENST00000530309 FAM198AQ9UFP1 575 aa12.61□□□□□ -0.39
CASP4-208ENST00000530309 RBM46Q8TBY0 533 aaKnown RBP12.6□□□□□ -0.39
CASP4-208ENST00000530309 EMP3P54852 163 aa12.59□□□□□ -0.39
CASP4-208ENST00000530309 MDM2Q00987 491 aaPredicted RBP12.59□□□□□ -0.39
CASP4-208ENST00000530309 GIGYF2Q6Y7W6 1299 aaKnown RBP12.59□□□□□ -0.39
CASP4-208ENST00000530309 TMUB1Q9BVT8 246 aa12.59□□□□□ -0.39
CASP4-208ENST00000530309 FAM117AQ9C073 453 aa12.59□□□□□ -0.39
CASP4-208ENST00000530309 TSKSQ9UJT2 592 aa12.59□□□□□ -0.39
CASP4-208ENST00000530309 GTF3C3Q9Y5Q9 886 aa12.59□□□□□ -0.39
CASP4-208ENST00000530309 TRIM6-TRIM34B2RNG4 842 aa12.58□□□□□ -0.4
CASP4-208ENST00000530309 REPIN1Q9BWE0 567 aaKnown RBP12.58□□□□□ -0.4
CASP4-208ENST00000530309 GPCPD1Q9NPB8 672 aa12.58□□□□□ -0.4
CASP4-208ENST00000530309 MARVELD3Q96A59 401 aa12.57□□□□□ -0.4
CASP4-208ENST00000530309 DDRGK1Q96HY6 314 aa12.57□□□□□ -0.4
CASP4-208ENST00000530309 PACS2Q86VP3 889 aa12.56□□□□□ -0.4
CASP4-208ENST00000530309 FAM163AQ96GL9 167 aaPredicted RBP12.56□□□□□ -0.4
CASP4-208ENST00000530309 ARHGAP33O14559 1287 aa12.55□□□□□ -0.4
CASP4-208ENST00000530309 ONECUT3O60422 494 aaPredicted RBP12.55□□□□□ -0.4
CASP4-208ENST00000530309 PSEN2P49810 448 aa12.54□□□□□ -0.4
CASP4-208ENST00000530309 NLRP7Q8WX94 980 aa12.54□□□□□ -0.4
CASP4-208ENST00000530309 EYA1Q99502 592 aa12.54□□□□□ -0.4
CASP4-208ENST00000530309 NBPF26B4DH59 902 aa12.53□□□□□ -0.4
CASP4-208ENST00000530309 MS4A1P11836 297 aa12.53□□□□□ -0.4
CASP4-208ENST00000530309 PROX2Q3B8N5 592 aa12.53□□□□□ -0.4
CASP4-208ENST00000530309 NUDT18Q6ZVK8 323 aa12.53□□□□□ -0.4
CASP4-208ENST00000530309 ZBED2Q9BTP6 218 aa12.53□□□□□ -0.4
CASP4-208ENST00000530309 PLEKHG3A1L390 1219 aa12.52□□□□□ -0.41
CASP4-208ENST00000530309 FAM205CA6NFA0 338 aa12.52□□□□□ -0.41
CASP4-208ENST00000530309 TATDN2Q93075 761 aa12.52□□□□□ -0.41
CASP4-208ENST00000530309 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.51□□□□□ -0.41
CASP4-208ENST00000530309 C3orf80F5H4A9 247 aa12.51□□□□□ -0.41
CASP4-208ENST00000530309 PBX2P40425 430 aa12.51□□□□□ -0.41
CASP4-208ENST00000530309 POTEEQ6S8J3 1075 aa12.51□□□□□ -0.41
CASP4-208ENST00000530309 ZNF687Q8N1G0 1237 aa12.51□□□□□ -0.41
CASP4-208ENST00000530309 PNMA3Q9UL41 463 aa12.51□□□□□ -0.41
CASP4-208ENST00000530309 RCCD1A6NED2 376 aa12.5□□□□□ -0.41
CASP4-208ENST00000530309 SSTR3P32745 418 aaPredicted RBP12.5□□□□□ -0.41
CASP4-208ENST00000530309 FAM217BQ9NTX9 383 aaPredicted RBP12.49□□□□□ -0.41
CASP4-208ENST00000530309 AXIN2Q9Y2T1 843 aa12.49□□□□□ -0.41
CASP4-208ENST00000530309 SLC4A5Q9BY07 1137 aa12.48□□□□□ -0.41
CASP4-208ENST00000530309 KIAA1468Q9P260 1216 aa12.48□□□□□ -0.41
CASP4-208ENST00000530309 DNAJB2P25686 324 aa12.46□□□□□ -0.41
CASP4-208ENST00000530309 DMRTA1Q5VZB9 504 aa12.46□□□□□ -0.41
CASP4-208ENST00000530309 SMAPO00193 183 aa12.45□□□□□ -0.42
CASP4-208ENST00000530309 HS3ST6Q96QI5 342 aa12.45□□□□□ -0.42
CASP4-208ENST00000530309 RABGEF1Q9UJ41 708 aa12.45□□□□□ -0.42
CASP4-208ENST00000530309 BEGAINQ9BUH8 593 aa12.44□□□□□ -0.42
CASP4-208ENST00000530309 POTEB3A0JP26 581 aa12.43□□□□□ -0.42
CASP4-208ENST00000530309 LCE2DQ5TA82 110 aaPredicted RBP12.43□□□□□ -0.42
CASP4-208ENST00000530309 POTEBQ6S5H4 581 aa12.43□□□□□ -0.42
CASP4-208ENST00000530309 TMEM134Q9H6X4 195 aa12.43□□□□□ -0.42
CASP4-208ENST00000530309 GOPCQ9HD26 462 aa12.42□□□□□ -0.42
CASP4-208ENST00000530309 VPS9D1Q9Y2B5 631 aa12.42□□□□□ -0.42
CASP4-208ENST00000530309 POTEMA6NI47 508 aa12.38□□□□□ -0.43
CASP4-208ENST00000530309 SULF1Q8IWU6 871 aa12.38□□□□□ -0.43
CASP4-208ENST00000530309 RSPH6AQ9H0K4 717 aa12.37□□□□□ -0.43
CASP4-208ENST00000530309 SEPT9Q9UHD8 586 aaPredicted RBP12.37□□□□□ -0.43
CASP4-208ENST00000530309 TK2O00142 265 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms