RNA–Protein interactions for RNA: ENST00000530075.1

GMDS-206, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 402 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-206ENST00000530075 PPP4R3BQ5MIZ7 849 aa12.04□□□□□ -0.48
GMDS-206ENST00000530075 PSDA5PKW4 1024 aaPredicted RBP12.03□□□□□ -0.48
GMDS-206ENST00000530075 C6orf132Q5T0Z8 1188 aa12.03□□□□□ -0.48
GMDS-206ENST00000530075 NPDC1Q9NQX5 325 aaPredicted RBP12.02□□□□□ -0.49
GMDS-206ENST00000530075 POTEEQ6S8J3 1075 aa12□□□□□ -0.49
GMDS-206ENST00000530075 BCL2L12Q9HB09 334 aa12□□□□□ -0.49
GMDS-206ENST00000530075 ZMYND10O75800 440 aa11.99□□□□□ -0.49
GMDS-206ENST00000530075 PTGDRQ13258 359 aa11.99□□□□□ -0.49
GMDS-206ENST00000530075 HS3ST6Q96QI5 342 aa11.98□□□□□ -0.49
GMDS-206ENST00000530075 COL9A1P20849 921 aa11.97□□□□□ -0.49
GMDS-206ENST00000530075 FECHP22830 423 aa11.97□□□□□ -0.49
GMDS-206ENST00000530075 FCHSD2O94868 740 aa11.95□□□□□ -0.5
GMDS-206ENST00000530075 AXIN2Q9Y2T1 843 aa11.95□□□□□ -0.5
GMDS-206ENST00000530075 PSEN2P49810 448 aa11.94□□□□□ -0.5
GMDS-206ENST00000530075 BARGINQ6ZT62 677 aa11.94□□□□□ -0.5
GMDS-206ENST00000530075 ZNF687Q8N1G0 1237 aa11.94□□□□□ -0.5
GMDS-206ENST00000530075 KCNK17Q96T54 332 aa11.94□□□□□ -0.5
GMDS-206ENST00000530075 PTPREP23469 700 aa11.93□□□□□ -0.5
GMDS-206ENST00000530075 GNPATO15228 680 aa11.92□□□□□ -0.5
GMDS-206ENST00000530075 HIC1Q14526 733 aa11.92□□□□□ -0.5
GMDS-206ENST00000530075 SLC24A3Q9HC58 644 aa11.9□□□□□ -0.5
GMDS-206ENST00000530075 PPP1R3GB7ZBB8 358 aa11.89□□□□□ -0.51
GMDS-206ENST00000530075 ARHGAP33O14559 1287 aa11.88□□□□□ -0.51
GMDS-206ENST00000530075 DMRTA1Q5VZB9 504 aa11.88□□□□□ -0.51
GMDS-206ENST00000530075 PRSS12P56730 875 aa11.87□□□□□ -0.51
GMDS-206ENST00000530075 PADI6Q6TGC4 694 aa11.87□□□□□ -0.51
GMDS-206ENST00000530075 CERKQ8TCT0 537 aa11.87□□□□□ -0.51
GMDS-206ENST00000530075 FAM198AQ9UFP1 575 aa11.87□□□□□ -0.51
GMDS-206ENST00000530075 KRI1Q8N9T8 703 aaKnown RBP11.86□□□□□ -0.51
GMDS-206ENST00000530075 CDCA7LQ96GN5 454 aa11.86□□□□□ -0.51
GMDS-206ENST00000530075 PROX2Q3B8N5 592 aa11.85□□□□□ -0.51
GMDS-206ENST00000530075 FAM161AQ3B820 660 aa11.84□□□□□ -0.51
GMDS-206ENST00000530075 TTC13Q8NBP0 860 aa11.84□□□□□ -0.51
GMDS-206ENST00000530075 TSKSQ9UJT2 592 aa11.84□□□□□ -0.51
GMDS-206ENST00000530075 PBX2P40425 430 aa11.83□□□□□ -0.52
GMDS-206ENST00000530075 MAP2K5Q13163 448 aa11.83□□□□□ -0.52
GMDS-206ENST00000530075 POTEGQ6S5H5 508 aa11.83□□□□□ -0.52
GMDS-206ENST00000530075 ZBED2Q9BTP6 218 aa11.83□□□□□ -0.52
GMDS-206ENST00000530075 C3orf80F5H4A9 247 aa11.82□□□□□ -0.52
GMDS-206ENST00000530075 IRF6O14896 467 aa11.82□□□□□ -0.52
GMDS-206ENST00000530075 POTEMA6NI47 508 aa11.81□□□□□ -0.52
GMDS-206ENST00000530075 KCNH8Q96L42 1107 aa11.81□□□□□ -0.52
GMDS-206ENST00000530075 MINK1Q8N4C8 1332 aaPredicted RBP11.81□□□□□ -0.52
GMDS-206ENST00000530075 CCDC102AQ96A19 550 aa11.8□□□□□ -0.52
GMDS-206ENST00000530075 RBM27Q9P2N5 1060 aaKnown RBP11.8□□□□□ -0.52
GMDS-206ENST00000530075 TRIM6-TRIM34B2RNG4 842 aa11.79□□□□□ -0.52
GMDS-206ENST00000530075 AK7Q96M32 723 aa11.77□□□□□ -0.53
GMDS-206ENST00000530075 KRTAP3-3Q9BYR6 98 aa11.77□□□□□ -0.53
GMDS-206ENST00000530075 KRTAP3-2Q9BYR7 98 aa11.77□□□□□ -0.53
GMDS-206ENST00000530075 VPS9D1Q9Y2B5 631 aa11.77□□□□□ -0.53
GMDS-206ENST00000530075 ADGRG1Q9Y653 693 aa11.77□□□□□ -0.53
GMDS-206ENST00000530075 LSM11P83369 360 aaKnown RBP eCLIP11.76□□□□□ -0.53
GMDS-206ENST00000530075 PHOX2BQ99453 314 aa11.76□□□□□ -0.53
GMDS-206ENST00000530075 KIAA1468Q9P260 1216 aa11.76□□□□□ -0.53
GMDS-206ENST00000530075 SLC4A5Q9BY07 1137 aa11.75□□□□□ -0.53
GMDS-206ENST00000530075 SMAPO00193 183 aa11.74□□□□□ -0.53
GMDS-206ENST00000530075 TRIM66O15016 1216 aa11.74□□□□□ -0.53
GMDS-206ENST00000530075 ANKRD13DQ6ZTN6 518 aa11.73□□□□□ -0.53
GMDS-206ENST00000530075 NUDT18Q6ZVK8 323 aa11.73□□□□□ -0.53
GMDS-206ENST00000530075 PACS2Q86VP3 889 aa11.73□□□□□ -0.53
GMDS-206ENST00000530075 CDAN1Q8IWY9 1227 aa11.73□□□□□ -0.53
GMDS-206ENST00000530075 TATDN2Q93075 761 aa11.73□□□□□ -0.53
GMDS-206ENST00000530075 ONECUT3O60422 494 aaPredicted RBP11.72□□□□□ -0.53
GMDS-206ENST00000530075 METTL3Q86U44 580 aaKnown RBP11.72□□□□□ -0.53
GMDS-206ENST00000530075 ADGRD1Q6QNK2 874 aa11.71□□□□□ -0.53
GMDS-206ENST00000530075 PXYLP1Q8TE99 480 aa11.71□□□□□ -0.53
GMDS-206ENST00000530075 NLRP7Q8WX94 980 aa11.71□□□□□ -0.53
GMDS-206ENST00000530075 EYA1Q99502 592 aa11.71□□□□□ -0.53
GMDS-206ENST00000530075 RABGEF1Q9UJ41 708 aa11.71□□□□□ -0.53
GMDS-206ENST00000530075 PNMA3Q9UL41 463 aa11.71□□□□□ -0.53
GMDS-206ENST00000530075 BHMG1C9JSJ3 638 aaPredicted RBP11.69□□□□□ -0.54
GMDS-206ENST00000530075 TK2O00142 265 aa11.69□□□□□ -0.54
GMDS-206ENST00000530075 OATP04181 439 aa11.69□□□□□ -0.54
GMDS-206ENST00000530075 SEPT9Q9UHD8 586 aaPredicted RBP11.69□□□□□ -0.54
GMDS-206ENST00000530075 NBPF26B4DH59 902 aa11.67□□□□□ -0.54
GMDS-206ENST00000530075 HRO43593 1189 aa11.67□□□□□ -0.54
GMDS-206ENST00000530075 PDE4DQ08499 809 aa11.67□□□□□ -0.54
GMDS-206ENST00000530075 RBM46Q8TBY0 533 aaKnown RBP11.67□□□□□ -0.54
GMDS-206ENST00000530075 BRPF1P55201 1214 aaPredicted RBP11.65□□□□□ -0.54
GMDS-206ENST00000530075 AMHR2Q16671 573 aa11.65□□□□□ -0.54
GMDS-206ENST00000530075 REPIN1Q9BWE0 567 aaKnown RBP11.65□□□□□ -0.54
GMDS-206ENST00000530075 RCCD1A6NED2 376 aa11.64□□□□□ -0.55
GMDS-206ENST00000530075 MDM2Q00987 491 aaPredicted RBP11.63□□□□□ -0.55
GMDS-206ENST00000530075 GPBP1L1Q9HC44 474 aaPredicted RBP11.63□□□□□ -0.55
GMDS-206ENST00000530075 PARP9Q8IXQ6 854 aa11.62□□□□□ -0.55
GMDS-206ENST00000530075 NEUROD2Q15784 382 aa11.61□□□□□ -0.55
GMDS-206ENST00000530075 TMUB1Q9BVT8 246 aa11.6□□□□□ -0.55
GMDS-206ENST00000530075 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.59□□□□□ -0.55
GMDS-206ENST00000530075 TTLL12Q14166 644 aaPredicted RBP11.59□□□□□ -0.55
GMDS-206ENST00000530075 FAM98CQ17RN3 349 aaKnown RBP11.59□□□□□ -0.55
GMDS-206ENST00000530075 MRPL50Q8N5N7 158 aaKnown RBP11.59□□□□□ -0.55
GMDS-206ENST00000530075 NBPF3Q9H094 633 aa11.59□□□□□ -0.55
GMDS-206ENST00000530075 DNAJB2P25686 324 aa11.58□□□□□ -0.56
GMDS-206ENST00000530075 TMEM134Q9H6X4 195 aa11.58□□□□□ -0.56
GMDS-206ENST00000530075 LAPTM4BQ86VI4 370 aa11.57□□□□□ -0.56
GMDS-206ENST00000530075 ZFRQ96KR1 1074 aaKnown RBP11.56□□□□□ -0.56
GMDS-206ENST00000530075 KDM4CQ9H3R0 1056 aa11.56□□□□□ -0.56
GMDS-206ENST00000530075 GPCPD1Q9NPB8 672 aa11.56□□□□□ -0.56
GMDS-206ENST00000530075 CLCN1P35523 988 aa11.55□□□□□ -0.56
GMDS-206ENST00000530075 SWT1Q5T5J6 900 aaKnown RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms