RNA–Protein interactions for RNA: ENST00000529848.1

SVIP-203, Transcript of small VCP interacting protein, humanhuman

TSL 5

Gene SVIP, Length 263 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-203ENST00000529848 KHSRPQ92945 711 aaKnown RBP eCLIP8.21□□□□□ -1.1
SVIP-203ENST00000529848 CDHR5Q9HBB8 845 aa8.21□□□□□ -1.1
SVIP-203ENST00000529848 FECHP22830 423 aa8.2□□□□□ -1.1
SVIP-203ENST00000529848 ZNF454Q8N9F8 522 aa8.2□□□□□ -1.1
SVIP-203ENST00000529848 GPBP1L1Q9HC44 474 aaPredicted RBP8.2□□□□□ -1.1
SVIP-203ENST00000529848 DAXXQ9UER7 740 aaPredicted RBP8.2□□□□□ -1.1
SVIP-203ENST00000529848 KDM4FA0A1W2PPD8 638 aa8.19□□□□□ -1.1
SVIP-203ENST00000529848 SNPHO15079 494 aa8.19□□□□□ -1.1
SVIP-203ENST00000529848 FOSBP53539 338 aa8.19□□□□□ -1.1
SVIP-203ENST00000529848 GPR153Q6NV75 609 aa8.19□□□□□ -1.1
SVIP-203ENST00000529848 TSR1Q2NL82 804 aaKnown RBP8.18□□□□□ -1.1
SVIP-203ENST00000529848 ZDHHC16Q969W1 377 aa8.18□□□□□ -1.1
SVIP-203ENST00000529848 KDM4CQ9H3R0 1056 aa8.18□□□□□ -1.1
SVIP-203ENST00000529848 MARVELD3Q96A59 401 aa8.17□□□□□ -1.1
SVIP-203ENST00000529848 AMHR2Q16671 573 aa8.16□□□□□ -1.1
SVIP-203ENST00000529848 CERKQ8TCT0 537 aa8.16□□□□□ -1.1
SVIP-203ENST00000529848 NPDC1Q9NQX5 325 aaPredicted RBP8.16□□□□□ -1.1
SVIP-203ENST00000529848 HOXB1P14653 301 aaPredicted RBP8.15□□□□□ -1.1
SVIP-203ENST00000529848 POTEB3A0JP26 581 aa8.14□□□□□ -1.11
SVIP-203ENST00000529848 TTLL12Q14166 644 aaPredicted RBP8.14□□□□□ -1.11
SVIP-203ENST00000529848 C6orf132Q5T0Z8 1188 aa8.14□□□□□ -1.11
SVIP-203ENST00000529848 POTEBQ6S5H4 581 aa8.14□□□□□ -1.11
SVIP-203ENST00000529848 PSDA5PKW4 1024 aaPredicted RBP8.13□□□□□ -1.11
SVIP-203ENST00000529848 PPP4R3BQ5MIZ7 849 aa8.13□□□□□ -1.11
SVIP-203ENST00000529848 IL27Q8NEV9 243 aa8.13□□□□□ -1.11
SVIP-203ENST00000529848 ADAM33Q9BZ11 813 aa8.13□□□□□ -1.11
SVIP-203ENST00000529848 LHX6Q9UPM6 363 aa8.13□□□□□ -1.11
SVIP-203ENST00000529848 PARP9Q8IXQ6 854 aa8.12□□□□□ -1.11
SVIP-203ENST00000529848 ERICH6Q7L0X2 663 aa8.11□□□□□ -1.11
SVIP-203ENST00000529848 PADI6Q6TGC4 694 aa8.1□□□□□ -1.11
SVIP-203ENST00000529848 DDRGK1Q96HY6 314 aa8.1□□□□□ -1.11
SVIP-203ENST00000529848 POTEMA6NI47 508 aa8.09□□□□□ -1.11
SVIP-203ENST00000529848 POTEGQ6S5H5 508 aa8.09□□□□□ -1.11
SVIP-203ENST00000529848 RBM27Q9P2N5 1060 aaKnown RBP8.09□□□□□ -1.11
SVIP-203ENST00000529848 OATP04181 439 aa8.08□□□□□ -1.12
SVIP-203ENST00000529848 EMP3P54852 163 aa8.08□□□□□ -1.12
SVIP-203ENST00000529848 FAM117AQ9C073 453 aa8.08□□□□□ -1.12
SVIP-203ENST00000529848 PTPREP23469 700 aa8.07□□□□□ -1.12
SVIP-203ENST00000529848 CLCN1P35523 988 aa8.07□□□□□ -1.12
SVIP-203ENST00000529848 PRSS12P56730 875 aa8.07□□□□□ -1.12
SVIP-203ENST00000529848 GIGYF2Q6Y7W6 1299 aaKnown RBP8.07□□□□□ -1.12
SVIP-203ENST00000529848 BCL2L12Q9HB09 334 aa8.07□□□□□ -1.12
SVIP-203ENST00000529848 FAM205CA6NFA0 338 aa8.06□□□□□ -1.12
SVIP-203ENST00000529848 MDM2Q00987 491 aaPredicted RBP8.06□□□□□ -1.12
SVIP-203ENST00000529848 FAM161AQ3B820 660 aa8.06□□□□□ -1.12
SVIP-203ENST00000529848 CDCA7LQ96GN5 454 aa8.06□□□□□ -1.12
SVIP-203ENST00000529848 GPCPD1Q9NPB8 672 aa8.06□□□□□ -1.12
SVIP-203ENST00000529848 TIMELESSQ9UNS1 1208 aa8.06□□□□□ -1.12
SVIP-203ENST00000529848 METTL3Q86U44 580 aaKnown RBP8.05□□□□□ -1.12
SVIP-203ENST00000529848 ADGRG1Q9Y653 693 aa8.05□□□□□ -1.12
SVIP-203ENST00000529848 PPP1R3GB7ZBB8 358 aa8.04□□□□□ -1.12
SVIP-203ENST00000529848 RBM46Q8TBY0 533 aaKnown RBP8.04□□□□□ -1.12
SVIP-203ENST00000529848 PXYLP1Q8TE99 480 aa8.04□□□□□ -1.12
SVIP-203ENST00000529848 KCNH8Q96L42 1107 aa8.04□□□□□ -1.12
SVIP-203ENST00000529848 HS3ST6Q96QI5 342 aa8.04□□□□□ -1.12
SVIP-203ENST00000529848 COL9A1P20849 921 aa8.03□□□□□ -1.12
SVIP-203ENST00000529848 VARS2Q5ST30 1063 aaKnown RBP8.03□□□□□ -1.12
SVIP-203ENST00000529848 C14orf37Q86TY3 774 aa8.03□□□□□ -1.12
SVIP-203ENST00000529848 TTC13Q8NBP0 860 aa8.03□□□□□ -1.12
SVIP-203ENST00000529848 PHOX2BQ99453 314 aa8.03□□□□□ -1.12
SVIP-203ENST00000529848 REPIN1Q9BWE0 567 aaKnown RBP8.03□□□□□ -1.12
SVIP-203ENST00000529848 ERBB3P21860 1342 aa8.03□□□□□ -1.12
SVIP-203ENST00000529848 PLEKHG3A1L390 1219 aa8.02□□□□□ -1.13
SVIP-203ENST00000529848 MS4A1P11836 297 aa8.02□□□□□ -1.13
SVIP-203ENST00000529848 TMUB1Q9BVT8 246 aa8.01□□□□□ -1.13
SVIP-203ENST00000529848 SSTR3P32745 418 aaPredicted RBP8□□□□□ -1.13
SVIP-203ENST00000529848 KCNK17Q96T54 332 aa8□□□□□ -1.13
SVIP-203ENST00000529848 NBPF26B4DH59 902 aa7.99□□□□□ -1.13
SVIP-203ENST00000529848 POTEEQ6S8J3 1075 aa7.99□□□□□ -1.13
SVIP-203ENST00000529848 NLRP7Q8WX94 980 aa7.99□□□□□ -1.13
SVIP-203ENST00000529848 TSKSQ9UJT2 592 aa7.99□□□□□ -1.13
SVIP-203ENST00000529848 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.98□□□□□ -1.13
SVIP-203ENST00000529848 TRIM6-TRIM34B2RNG4 842 aa7.98□□□□□ -1.13
SVIP-203ENST00000529848 PACS2Q86VP3 889 aa7.98□□□□□ -1.13
SVIP-203ENST00000529848 FAM217BQ9NTX9 383 aaPredicted RBP7.98□□□□□ -1.13
SVIP-203ENST00000529848 FAM198AQ9UFP1 575 aa7.98□□□□□ -1.13
SVIP-203ENST00000529848 NUDT18Q6ZVK8 323 aa7.97□□□□□ -1.13
SVIP-203ENST00000529848 CDAN1Q8IWY9 1227 aa7.97□□□□□ -1.13
SVIP-203ENST00000529848 PNMA3Q9UL41 463 aa7.97□□□□□ -1.13
SVIP-203ENST00000529848 RCCD1A6NED2 376 aa7.96□□□□□ -1.14
SVIP-203ENST00000529848 TATDN2Q93075 761 aa7.96□□□□□ -1.14
SVIP-203ENST00000529848 BEGAINQ9BUH8 593 aa7.96□□□□□ -1.14
SVIP-203ENST00000529848 GOPCQ9HD26 462 aa7.96□□□□□ -1.14
SVIP-203ENST00000529848 ONECUT3O60422 494 aaPredicted RBP7.95□□□□□ -1.14
SVIP-203ENST00000529848 DNAJB2P25686 324 aa7.95□□□□□ -1.14
SVIP-203ENST00000529848 PCMTD1Q96MG8 357 aaPredicted RBP7.95□□□□□ -1.14
SVIP-203ENST00000529848 KRTAP3-3Q9BYR6 98 aa7.95□□□□□ -1.14
SVIP-203ENST00000529848 KRTAP3-2Q9BYR7 98 aa7.95□□□□□ -1.14
SVIP-203ENST00000529848 RSPH6AQ9H0K4 717 aa7.95□□□□□ -1.14
SVIP-203ENST00000529848 PROX2Q3B8N5 592 aa7.94□□□□□ -1.14
SVIP-203ENST00000529848 ZNF687Q8N1G0 1237 aa7.94□□□□□ -1.14
SVIP-203ENST00000529848 EYA1Q99502 592 aa7.94□□□□□ -1.14
SVIP-203ENST00000529848 AXIN2Q9Y2T1 843 aa7.94□□□□□ -1.14
SVIP-203ENST00000529848 PSEN2P49810 448 aa7.93□□□□□ -1.14
SVIP-203ENST00000529848 SH3D19Q5HYK7 790 aa7.93□□□□□ -1.14
SVIP-203ENST00000529848 ATP1B4Q9UN42 357 aaPredicted RBP7.93□□□□□ -1.14
SVIP-203ENST00000529848 ARHGAP33O14559 1287 aa7.92□□□□□ -1.14
SVIP-203ENST00000529848 SULF1Q8IWU6 871 aa7.92□□□□□ -1.14
SVIP-203ENST00000529848 ZBED2Q9BTP6 218 aa7.92□□□□□ -1.14
SVIP-203ENST00000529848 SMAPO00193 183 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms