RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 RBM33Q96EV2 1170 aaKnown RBP11.16□□□□□ -0.62
C11orf88-204ENST00000529661 KCNH8Q96L42 1107 aa11.16□□□□□ -0.62
C11orf88-204ENST00000529661 BCL2L12Q9HB09 334 aa11.16□□□□□ -0.62
C11orf88-204ENST00000529661 SEMA3EO15041 775 aa11.15□□□□□ -0.62
C11orf88-204ENST00000529661 MLLT3P42568 568 aaPredicted RBP11.15□□□□□ -0.62
C11orf88-204ENST00000529661 PTPREP23469 700 aa11.13□□□□□ -0.63
C11orf88-204ENST00000529661 ADGRD1Q6QNK2 874 aa11.13□□□□□ -0.63
C11orf88-204ENST00000529661 MAP3K7O43318 606 aa11.12□□□□□ -0.63
C11orf88-204ENST00000529661 MYT1LQ9UL68 1186 aa11.12□□□□□ -0.63
C11orf88-204ENST00000529661 RNF166Q96A37 237 aaPredicted RBP11.11□□□□□ -0.63
C11orf88-204ENST00000529661 EN1Q05925 392 aaPredicted RBP11.1□□□□□ -0.63
C11orf88-204ENST00000529661 TK2O00142 265 aa11.09□□□□□ -0.63
C11orf88-204ENST00000529661 OSBPP22059 807 aa11.09□□□□□ -0.63
C11orf88-204ENST00000529661 HRO43593 1189 aa11.08□□□□□ -0.64
C11orf88-204ENST00000529661 PRIM1P49642 420 aaKnown RBP11.08□□□□□ -0.64
C11orf88-204ENST00000529661 TSR1Q2NL82 804 aaKnown RBP11.08□□□□□ -0.64
C11orf88-204ENST00000529661 C6orf132Q5T0Z8 1188 aa11.08□□□□□ -0.64
C11orf88-204ENST00000529661 TESPA1A2RU30 521 aaPredicted RBP11.06□□□□□ -0.64
C11orf88-204ENST00000529661 COL9A1P20849 921 aa11.05□□□□□ -0.64
C11orf88-204ENST00000529661 ZBED2Q9BTP6 218 aa11.05□□□□□ -0.64
C11orf88-204ENST00000529661 VPS9D1Q9Y2B5 631 aa11.05□□□□□ -0.64
C11orf88-204ENST00000529661 PPP1R3GB7ZBB8 358 aa11.04□□□□□ -0.64
C11orf88-204ENST00000529661 SLC4A5Q9BY07 1137 aa11.04□□□□□ -0.64
C11orf88-204ENST00000529661 SMYD5Q6GMV2 418 aa11.02□□□□□ -0.65
C11orf88-204ENST00000529661 CDHR5Q9HBB8 845 aa11.02□□□□□ -0.65
C11orf88-204ENST00000529661 NUTM2FA1L443 756 aa10.99□□□□□ -0.65
C11orf88-204ENST00000529661 PROX2Q3B8N5 592 aa10.99□□□□□ -0.65
C11orf88-204ENST00000529661 TULP1O00294 542 aaPredicted RBP10.97□□□□□ -0.65
C11orf88-204ENST00000529661 RBM26Q5T8P6 1007 aaKnown RBP10.97□□□□□ -0.65
C11orf88-204ENST00000529661 BHMG1C9JSJ3 638 aaPredicted RBP10.96□□□□□ -0.65
C11orf88-204ENST00000529661 CERKQ8TCT0 537 aa10.95□□□□□ -0.66
C11orf88-204ENST00000529661 STAC3Q96MF2 364 aa10.95□□□□□ -0.66
C11orf88-204ENST00000529661 TRIM6-TRIM34B2RNG4 842 aa10.92□□□□□ -0.66
C11orf88-204ENST00000529661 PRSS12P56730 875 aa10.92□□□□□ -0.66
C11orf88-204ENST00000529661 CDCA7LQ96GN5 454 aa10.92□□□□□ -0.66
C11orf88-204ENST00000529661 NPDC1Q9NQX5 325 aaPredicted RBP10.92□□□□□ -0.66
C11orf88-204ENST00000529661 KIAA1468Q9P260 1216 aa10.92□□□□□ -0.66
C11orf88-204ENST00000529661 PTGDRQ13258 359 aa10.9□□□□□ -0.66
C11orf88-204ENST00000529661 KCTD12Q96CX2 325 aaKnown RBP10.9□□□□□ -0.66
C11orf88-204ENST00000529661 NBPF3Q9H094 633 aa10.9□□□□□ -0.66
C11orf88-204ENST00000529661 RABGEF1Q9UJ41 708 aa10.9□□□□□ -0.66
C11orf88-204ENST00000529661 MRPL50Q8N5N7 158 aaKnown RBP10.89□□□□□ -0.67
C11orf88-204ENST00000529661 TSKSQ9UJT2 592 aa10.89□□□□□ -0.67
C11orf88-204ENST00000529661 FCHSD2O94868 740 aa10.88□□□□□ -0.67
C11orf88-204ENST00000529661 PADI6Q6TGC4 694 aa10.88□□□□□ -0.67
C11orf88-204ENST00000529661 PACS2Q86VP3 889 aa10.88□□□□□ -0.67
C11orf88-204ENST00000529661 GPIHBP1Q8IV16 184 aa10.87□□□□□ -0.67
C11orf88-204ENST00000529661 FAM198AQ9UFP1 575 aa10.87□□□□□ -0.67
C11orf88-204ENST00000529661 SEPT9Q9UHD8 586 aaPredicted RBP10.87□□□□□ -0.67
C11orf88-204ENST00000529661 GOLGA8CPA6NN73 597 aa10.86□□□□□ -0.67
C11orf88-204ENST00000529661 ONECUT3O60422 494 aaPredicted RBP10.86□□□□□ -0.67
C11orf88-204ENST00000529661 RBM27Q9P2N5 1060 aaKnown RBP10.85□□□□□ -0.67
C11orf88-204ENST00000529661 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.84□□□□□ -0.67
C11orf88-204ENST00000529661 HCSTQ9UBK5 93 aa10.84□□□□□ -0.67
C11orf88-204ENST00000529661 NBPF26B4DH59 902 aa10.83□□□□□ -0.68
C11orf88-204ENST00000529661 SMAPO00193 183 aa10.83□□□□□ -0.68
C11orf88-204ENST00000529661 HIC1Q14526 733 aa10.83□□□□□ -0.68
C11orf88-204ENST00000529661 LMOD2Q6P5Q4 547 aa10.83□□□□□ -0.68
C11orf88-204ENST00000529661 THSD4Q6ZMP0 1018 aa10.82□□□□□ -0.68
C11orf88-204ENST00000529661 WNT2BQ93097 391 aa10.82□□□□□ -0.68
C11orf88-204ENST00000529661 BCANQ96GW7 911 aa10.82□□□□□ -0.68
C11orf88-204ENST00000529661 PNMA3Q9UL41 463 aa10.82□□□□□ -0.68
C11orf88-204ENST00000529661 C3orf80F5H4A9 247 aa10.81□□□□□ -0.68
C11orf88-204ENST00000529661 GPR37O15354 613 aa10.81□□□□□ -0.68
C11orf88-204ENST00000529661 TATDN2Q93075 761 aa10.81□□□□□ -0.68
C11orf88-204ENST00000529661 GNPATO15228 680 aa10.8□□□□□ -0.68
C11orf88-204ENST00000529661 NUDT18Q6ZVK8 323 aa10.8□□□□□ -0.68
C11orf88-204ENST00000529661 LAPTM4BQ86VI4 370 aa10.8□□□□□ -0.68
C11orf88-204ENST00000529661 TTC13Q8NBP0 860 aa10.8□□□□□ -0.68
C11orf88-204ENST00000529661 FAM98CQ17RN3 349 aaKnown RBP10.79□□□□□ -0.68
C11orf88-204ENST00000529661 FAM161AQ3B820 660 aa10.78□□□□□ -0.68
C11orf88-204ENST00000529661 FECHP22830 423 aa10.77□□□□□ -0.69
C11orf88-204ENST00000529661 PTPN5P54829 565 aa10.77□□□□□ -0.69
C11orf88-204ENST00000529661 ANKK1Q8NFD2 765 aa10.77□□□□□ -0.69
C11orf88-204ENST00000529661 ZFRQ96KR1 1074 aaKnown RBP10.77□□□□□ -0.69
C11orf88-204ENST00000529661 ADGRG1Q9Y653 693 aa10.75□□□□□ -0.69
C11orf88-204ENST00000529661 BCAMP50895 628 aa10.74□□□□□ -0.69
C11orf88-204ENST00000529661 RBM46Q8TBY0 533 aaKnown RBP10.73□□□□□ -0.69
C11orf88-204ENST00000529661 SOWAHBA6NEL2 793 aa10.71□□□□□ -0.69
C11orf88-204ENST00000529661 LRCH3Q96II8 777 aa10.71□□□□□ -0.69
C11orf88-204ENST00000529661 EYA1Q99502 592 aa10.71□□□□□ -0.69
C11orf88-204ENST00000529661 SAMD7Q7Z3H4 446 aa10.7□□□□□ -0.7
C11orf88-204ENST00000529661 HDGFP51858 240 aaKnown RBP10.69□□□□□ -0.7
C11orf88-204ENST00000529661 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.69□□□□□ -0.7
C11orf88-204ENST00000529661 PLA2G2EQ9NZK7 142 aa10.69□□□□□ -0.7
C11orf88-204ENST00000529661 RNF40O75150 1001 aa10.68□□□□□ -0.7
C11orf88-204ENST00000529661 OATP04181 439 aa10.68□□□□□ -0.7
C11orf88-204ENST00000529661 ZC3H15Q8WU90 426 aaKnown RBP10.68□□□□□ -0.7
C11orf88-204ENST00000529661 MAP2K5Q13163 448 aa10.67□□□□□ -0.7
C11orf88-204ENST00000529661 METTL3Q86U44 580 aaKnown RBP10.67□□□□□ -0.7
C11orf88-204ENST00000529661 RCCD1A6NED2 376 aa10.66□□□□□ -0.7
C11orf88-204ENST00000529661 DNAJB2P25686 324 aa10.66□□□□□ -0.7
C11orf88-204ENST00000529661 SWT1Q5T5J6 900 aaKnown RBP10.66□□□□□ -0.7
C11orf88-204ENST00000529661 PXYLP1Q8TE99 480 aa10.66□□□□□ -0.7
C11orf88-204ENST00000529661 WBP1LQ9NX94 342 aa10.65□□□□□ -0.7
C11orf88-204ENST00000529661 KRI1Q8N9T8 703 aaKnown RBP10.64□□□□□ -0.71
C11orf88-204ENST00000529661 HPS5Q9UPZ3 1129 aa10.64□□□□□ -0.71
C11orf88-204ENST00000529661 NLRP7Q8WX94 980 aa10.63□□□□□ -0.71
C11orf88-204ENST00000529661 MINK1Q8N4C8 1332 aaPredicted RBP10.62□□□□□ -0.71
C11orf88-204ENST00000529661 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms