RNA–Protein interactions for RNA: ENST00000529430.1

CLP1-203, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 5 BASIC

Gene CLP1, Length 1,778 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-203ENST00000529430 ERBINQ96RT1 1412 aa16.52■□□□□ 0.23
CLP1-203ENST00000529430 ZFYVE16Q7Z3T8 1539 aa16.52■□□□□ 0.23
CLP1-203ENST00000529430 ATP7AQ04656 1500 aa16.51■□□□□ 0.23
CLP1-203ENST00000529430 NUP155O75694 1391 aa16.5■□□□□ 0.23
CLP1-203ENST00000529430 INO80Q9ULG1 1556 aaPredicted RBP16.48■□□□□ 0.23
CLP1-203ENST00000529430 PKD2Q13563 968 aa16.48■□□□□ 0.23
CLP1-203ENST00000529430 SUPT16HQ9Y5B9 1047 aaKnown RBP16.48■□□□□ 0.23
CLP1-203ENST00000529430 KDM5DQ9BY66 1539 aa16.47■□□□□ 0.23
CLP1-203ENST00000529430 MLH3Q9UHC1 1453 aa16.47■□□□□ 0.23
CLP1-203ENST00000529430 RAPGEF3O95398 923 aa16.46■□□□□ 0.23
CLP1-203ENST00000529430 KDM5CP41229 1560 aa16.46■□□□□ 0.23
CLP1-203ENST00000529430 DHX29Q7Z478 1369 aaKnown RBP16.45■□□□□ 0.22
CLP1-203ENST00000529430 HECW2Q9P2P5 1572 aa16.44■□□□□ 0.22
CLP1-203ENST00000529430 TSPOAP1O95153 1857 aa16.44■□□□□ 0.22
CLP1-203ENST00000529430 NBPF8Q3BBV2 869 aa16.43■□□□□ 0.22
CLP1-203ENST00000529430 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.43■□□□□ 0.22
CLP1-203ENST00000529430 WASHC2AQ641Q2 1341 aa16.43■□□□□ 0.22
CLP1-203ENST00000529430 TRHP20396 242 aaPredicted RBP16.42■□□□□ 0.22
CLP1-203ENST00000529430 KIF13AQ9H1H9 1805 aa16.42■□□□□ 0.22
CLP1-203ENST00000529430 KANK1Q14678 1352 aa16.41■□□□□ 0.22
CLP1-203ENST00000529430 KIF3BO15066 747 aa16.4■□□□□ 0.22
CLP1-203ENST00000529430 A2MP01023 1474 aa16.4■□□□□ 0.22
CLP1-203ENST00000529430 KIDINS220Q9ULH0 1771 aa16.4■□□□□ 0.22
CLP1-203ENST00000529430 PPRC1Q5VV67 1664 aaKnown RBP16.39■□□□□ 0.21
CLP1-203ENST00000529430 UNC13BO14795 1591 aa16.39■□□□□ 0.21
CLP1-203ENST00000529430 CCDC7Q96M83 1385 aa16.39■□□□□ 0.21
CLP1-203ENST00000529430 FAM135AQ9P2D6 1515 aa16.38■□□□□ 0.21
CLP1-203ENST00000529430 SPATA31E1Q6ZUB1 1445 aa16.38■□□□□ 0.21
CLP1-203ENST00000529430 CNTLNQ9NXG0 1405 aa16.38■□□□□ 0.21
CLP1-203ENST00000529430 RICTORQ6R327 1708 aa16.37■□□□□ 0.21
CLP1-203ENST00000529430 MAGI2Q86UL8 1455 aa16.37■□□□□ 0.21
CLP1-203ENST00000529430 EIF2AK4Q9P2K8 1649 aaKnown RBP16.37■□□□□ 0.21
CLP1-203ENST00000529430 UHRF1BP1Q6BDS2 1440 aa16.36■□□□□ 0.21
CLP1-203ENST00000529430 ZMYM4Q5VZL5 1548 aa16.35■□□□□ 0.21
CLP1-203ENST00000529430 IQGAP3Q86VI3 1631 aa16.33■□□□□ 0.21
CLP1-203ENST00000529430 ARID4BQ4LE39 1312 aaPredicted RBP16.33■□□□□ 0.2
CLP1-203ENST00000529430 FRMPD1Q5SYB0 1578 aa16.32■□□□□ 0.2
CLP1-203ENST00000529430 ABCA6Q8N139 1617 aa16.32■□□□□ 0.2
CLP1-203ENST00000529430 DIP2CQ9Y2E4 1556 aa16.3■□□□□ 0.2
CLP1-203ENST00000529430 DEPDC5O75140 1603 aa16.3■□□□□ 0.2
CLP1-203ENST00000529430 YEATS2Q9ULM3 1422 aa16.3■□□□□ 0.2
CLP1-203ENST00000529430 C11orf95C9JLR9 678 aaPredicted RBP16.3■□□□□ 0.2
CLP1-203ENST00000529430 RALGAPBQ86X10 1494 aa16.29■□□□□ 0.2
CLP1-203ENST00000529430 KIF7Q2M1P5 1343 aa16.29■□□□□ 0.2
CLP1-203ENST00000529430 GGT6Q6P531 493 aa16.29■□□□□ 0.2
CLP1-203ENST00000529430 ATP10AO60312 1499 aa16.29■□□□□ 0.2
CLP1-203ENST00000529430 USP47Q96K76 1375 aa16.29■□□□□ 0.2
CLP1-203ENST00000529430 PRDM15P57071 1507 aaPredicted RBP16.28■□□□□ 0.2
CLP1-203ENST00000529430 ZNF326Q5BKZ1 582 aaKnown RBP16.27■□□□□ 0.2
CLP1-203ENST00000529430 COL17A1Q9UMD9 1497 aaPredicted RBP16.26■□□□□ 0.19
CLP1-203ENST00000529430 TSHZ2Q9NRE2 1034 aa16.26■□□□□ 0.19
CLP1-203ENST00000529430 RNF17Q9BXT8 1623 aaKnown RBP16.25■□□□□ 0.19
CLP1-203ENST00000529430 CCDC144AA2RUR9 1427 aa16.25■□□□□ 0.19
CLP1-203ENST00000529430 WASHC2CQ9Y4E1 1318 aa16.25■□□□□ 0.19
CLP1-203ENST00000529430 PRKRIP1Q9H875 184 aaPredicted RBP16.25■□□□□ 0.19
CLP1-203ENST00000529430 BCORL1Q5H9F3 1711 aa16.24■□□□□ 0.19
CLP1-203ENST00000529430 CARD11Q9BXL7 1154 aa16.24■□□□□ 0.19
CLP1-203ENST00000529430 ROCK2O75116 1388 aaKnown RBP16.24■□□□□ 0.19
CLP1-203ENST00000529430 VWDEQ8N2E2 1590 aa16.24■□□□□ 0.19
CLP1-203ENST00000529430 DCAF11Q8TEB1 546 aa16.23■□□□□ 0.19
CLP1-203ENST00000529430 REREQ9P2R6 1566 aa16.22■□□□□ 0.19
CLP1-203ENST00000529430 TET3O43151 1660 aa16.22■□□□□ 0.19
CLP1-203ENST00000529430 MROH1Q8NDA8 1641 aa16.21■□□□□ 0.19
CLP1-203ENST00000529430 POLR1AO95602 1720 aaPredicted RBP16.21■□□□□ 0.19
CLP1-203ENST00000529430 LMTK2Q8IWU2 1503 aa16.21■□□□□ 0.19
CLP1-203ENST00000529430 ARHGEF40Q8TER5 1519 aa16.21■□□□□ 0.19
CLP1-203ENST00000529430 PPP6R1Q9UPN7 881 aa16.21■□□□□ 0.18
CLP1-203ENST00000529430 NEFLP07196 543 aa16.2■□□□□ 0.18
CLP1-203ENST00000529430 KDM2AQ9Y2K7 1162 aa16.2■□□□□ 0.18
CLP1-203ENST00000529430 AGLP35573 1532 aa16.19■□□□□ 0.18
CLP1-203ENST00000529430 EFCAB6Q5THR3 1501 aa16.18■□□□□ 0.18
CLP1-203ENST00000529430 HNRNPUQ00839 825 aaKnown RBP eCLIP16.18■□□□□ 0.18
CLP1-203ENST00000529430 PLA2R1Q13018 1463 aa16.17■□□□□ 0.18
CLP1-203ENST00000529430 E9PCH4 1651 aa16.17■□□□□ 0.18
CLP1-203ENST00000529430 PRAG1Q86YV5 1406 aa16.16■□□□□ 0.18
CLP1-203ENST00000529430 ESF1Q9H501 851 aaKnown RBP16.16■□□□□ 0.18
CLP1-203ENST00000529430 ABCC3O15438 1527 aa16.16■□□□□ 0.18
CLP1-203ENST00000529430 PTPRTO14522 1441 aa16.16■□□□□ 0.18
CLP1-203ENST00000529430 MRS2Q9HD23 443 aa16.15■□□□□ 0.18
CLP1-203ENST00000529430 TRPM2O94759 1503 aa16.14■□□□□ 0.17
CLP1-203ENST00000529430 ZC3H13Q5T200 1668 aaKnown RBP16.14■□□□□ 0.17
CLP1-203ENST00000529430 FKBP8Q14318 412 aa16.14■□□□□ 0.17
CLP1-203ENST00000529430 CEP152O94986 1710 aa16.13■□□□□ 0.17
CLP1-203ENST00000529430 STAC3Q96MF2 364 aa16.13■□□□□ 0.17
CLP1-203ENST00000529430 GPRASP1Q5JY77 1395 aa16.13■□□□□ 0.17
CLP1-203ENST00000529430 ST20-MTHFSA0A0A6YYL1 179 aa16.12■□□□□ 0.17
CLP1-203ENST00000529430 MLECQ14165 292 aa16.12■□□□□ 0.17
CLP1-203ENST00000529430 NPATQ14207 1427 aa16.12■□□□□ 0.17
CLP1-203ENST00000529430 SPHKAPQ2M3C7 1700 aa16.12■□□□□ 0.17
CLP1-203ENST00000529430 RGL3Q3MIN7 710 aa16.12■□□□□ 0.17
CLP1-203ENST00000529430 ARHGAP31Q2M1Z3 1444 aa16.11■□□□□ 0.17
CLP1-203ENST00000529430 POLR3GLQ9BT43 218 aa16.11■□□□□ 0.17
CLP1-203ENST00000529430 ANP32EQ9BTT0 268 aa16.1■□□□□ 0.17
CLP1-203ENST00000529430 KTN1Q86UP2 1357 aaKnown RBP16.1■□□□□ 0.17
CLP1-203ENST00000529430 CAMSAP1Q5T5Y3 1602 aa16.1■□□□□ 0.17
CLP1-203ENST00000529430 CCDC184Q52MB2 194 aa16.08■□□□□ 0.17
CLP1-203ENST00000529430 LAMC1P11047 1609 aa16.08■□□□□ 0.16
CLP1-203ENST00000529430 TRPM1Q7Z4N2 1603 aa16.07■□□□□ 0.16
CLP1-203ENST00000529430 FAM9BQ8IZU0 186 aa16.07■□□□□ 0.16
CLP1-203ENST00000529430 ZBED9Q6R2W3 1325 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms