RNA–Protein interactions for RNA: ENST00000528762.1

BRCA2-203, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 4

Gene BRCA2, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-203ENST00000528762 TYW1BQ6NUM6 668 aa7.48□□□□□ -1.21
BRCA2-203ENST00000528762 MRPL50Q8N5N7 158 aaKnown RBP7.48□□□□□ -1.21
BRCA2-203ENST00000528762 GOLGA8CPA6NN73 597 aa7.47□□□□□ -1.21
BRCA2-203ENST00000528762 BHMG1C9JSJ3 638 aaPredicted RBP7.47□□□□□ -1.21
BRCA2-203ENST00000528762 PHF14O94880 888 aa7.47□□□□□ -1.21
BRCA2-203ENST00000528762 HAP1P54257 671 aaPredicted RBP7.47□□□□□ -1.21
BRCA2-203ENST00000528762 PPP1R3GB7ZBB8 358 aa7.46□□□□□ -1.22
BRCA2-203ENST00000528762 WNT2BQ93097 391 aa7.45□□□□□ -1.22
BRCA2-203ENST00000528762 SLC4A5Q9BY07 1137 aa7.45□□□□□ -1.22
BRCA2-203ENST00000528762 NBR1Q14596 966 aa7.44□□□□□ -1.22
BRCA2-203ENST00000528762 TSR1Q2NL82 804 aaKnown RBP7.44□□□□□ -1.22
BRCA2-203ENST00000528762 C6orf132Q5T0Z8 1188 aa7.44□□□□□ -1.22
BRCA2-203ENST00000528762 THSD4Q6ZMP0 1018 aa7.44□□□□□ -1.22
BRCA2-203ENST00000528762 FBXW7Q969H0 707 aa7.44□□□□□ -1.22
BRCA2-203ENST00000528762 KIAA1468Q9P260 1216 aa7.43□□□□□ -1.22
BRCA2-203ENST00000528762 SEPT9Q9UHD8 586 aaPredicted RBP7.43□□□□□ -1.22
BRCA2-203ENST00000528762 PRIM1P49642 420 aaKnown RBP7.42□□□□□ -1.22
BRCA2-203ENST00000528762 E2F4Q16254 413 aa7.42□□□□□ -1.22
BRCA2-203ENST00000528762 NBPF3Q9H094 633 aa7.42□□□□□ -1.22
BRCA2-203ENST00000528762 WDR70Q9NW82 654 aa7.42□□□□□ -1.22
BRCA2-203ENST00000528762 GRXCR2A6NFK2 248 aa7.41□□□□□ -1.22
BRCA2-203ENST00000528762 MAP3K7O43318 606 aa7.41□□□□□ -1.22
BRCA2-203ENST00000528762 BCAMP50895 628 aa7.41□□□□□ -1.22
BRCA2-203ENST00000528762 PDIA6Q15084 440 aa7.41□□□□□ -1.22
BRCA2-203ENST00000528762 EPAS1Q99814 870 aa7.41□□□□□ -1.22
BRCA2-203ENST00000528762 TSHZ2Q9NRE2 1034 aa7.4□□□□□ -1.22
BRCA2-203ENST00000528762 RABGEF1Q9UJ41 708 aa7.4□□□□□ -1.22
BRCA2-203ENST00000528762 EN1Q05925 392 aaPredicted RBP7.38□□□□□ -1.23
BRCA2-203ENST00000528762 VSIG10Q8N0Z9 540 aa7.38□□□□□ -1.23
BRCA2-203ENST00000528762 TRIM6-TRIM34B2RNG4 842 aa7.37□□□□□ -1.23
BRCA2-203ENST00000528762 ANKK1Q8NFD2 765 aa7.37□□□□□ -1.23
BRCA2-203ENST00000528762 CDHR5Q9HBB8 845 aa7.37□□□□□ -1.23
BRCA2-203ENST00000528762 SMAPO00193 183 aa7.36□□□□□ -1.23
BRCA2-203ENST00000528762 ZFRQ96KR1 1074 aaKnown RBP7.36□□□□□ -1.23
BRCA2-203ENST00000528762 SPDYE16A6NNV3 312 aaPredicted RBP7.35□□□□□ -1.23
BRCA2-203ENST00000528762 TSKSQ9UJT2 592 aa7.35□□□□□ -1.23
BRCA2-203ENST00000528762 C3orf80F5H4A9 247 aa7.34□□□□□ -1.23
BRCA2-203ENST00000528762 FAM198AQ9UFP1 575 aa7.34□□□□□ -1.23
BRCA2-203ENST00000528762 WBP1LQ9NX94 342 aa7.33□□□□□ -1.24
BRCA2-203ENST00000528762 SOWAHBA6NEL2 793 aa7.32□□□□□ -1.24
BRCA2-203ENST00000528762 OSBPP22059 807 aa7.32□□□□□ -1.24
BRCA2-203ENST00000528762 CDCA7LQ96GN5 454 aa7.31□□□□□ -1.24
BRCA2-203ENST00000528762 BCANQ96GW7 911 aa7.31□□□□□ -1.24
BRCA2-203ENST00000528762 MLLT3P42568 568 aaPredicted RBP7.3□□□□□ -1.24
BRCA2-203ENST00000528762 FAM98CQ17RN3 349 aaKnown RBP7.3□□□□□ -1.24
BRCA2-203ENST00000528762 LAPTM4BQ86VI4 370 aa7.3□□□□□ -1.24
BRCA2-203ENST00000528762 HPS5Q9UPZ3 1129 aa7.3□□□□□ -1.24
BRCA2-203ENST00000528762 PRSS12P56730 875 aa7.29□□□□□ -1.24
BRCA2-203ENST00000528762 PACS2Q86VP3 889 aa7.29□□□□□ -1.24
BRCA2-203ENST00000528762 KCNV2Q8TDN2 545 aa7.29□□□□□ -1.24
BRCA2-203ENST00000528762 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.29□□□□□ -1.24
BRCA2-203ENST00000528762 ARIH1Q9Y4X5 557 aaPredicted RBP7.29□□□□□ -1.24
BRCA2-203ENST00000528762 ONECUT3O60422 494 aaPredicted RBP7.28□□□□□ -1.24
BRCA2-203ENST00000528762 LRCH3Q96II8 777 aa7.28□□□□□ -1.24
BRCA2-203ENST00000528762 PNMA3Q9UL41 463 aa7.28□□□□□ -1.24
BRCA2-203ENST00000528762 SAMD7Q7Z3H4 446 aa7.27□□□□□ -1.25
BRCA2-203ENST00000528762 RNF40O75150 1001 aa7.26□□□□□ -1.25
BRCA2-203ENST00000528762 A0A0G2JS52 829 aa7.25□□□□□ -1.25
BRCA2-203ENST00000528762 PADI6Q6TGC4 694 aa7.25□□□□□ -1.25
BRCA2-203ENST00000528762 NUDT18Q6ZVK8 323 aa7.25□□□□□ -1.25
BRCA2-203ENST00000528762 TATDN2Q93075 761 aa7.25□□□□□ -1.25
BRCA2-203ENST00000528762 TSR3Q9UJK0 312 aaKnown RBP7.25□□□□□ -1.25
BRCA2-203ENST00000528762 KDM2AQ9Y2K7 1162 aa7.25□□□□□ -1.25
BRCA2-203ENST00000528762 NBPF26B4DH59 902 aa7.23□□□□□ -1.25
BRCA2-203ENST00000528762 NPDC1Q9NQX5 325 aaPredicted RBP7.23□□□□□ -1.25
BRCA2-203ENST00000528762 PPP4CP60510 307 aa7.22□□□□□ -1.25
BRCA2-203ENST00000528762 ITGBL1O95965 494 aaPredicted RBP7.21□□□□□ -1.26
BRCA2-203ENST00000528762 CERKQ8TCT0 537 aa7.21□□□□□ -1.26
BRCA2-203ENST00000528762 ARHGEF1Q92888 912 aaKnown RBP7.21□□□□□ -1.26
BRCA2-203ENST00000528762 IFFO2Q5TF58 517 aa7.2□□□□□ -1.26
BRCA2-203ENST00000528762 KCNC4Q03721 635 aa7.19□□□□□ -1.26
BRCA2-203ENST00000528762 FAM161AQ3B820 660 aa7.19□□□□□ -1.26
BRCA2-203ENST00000528762 NUTM2FA1L443 756 aa7.18□□□□□ -1.26
BRCA2-203ENST00000528762 SEMA3EO15041 775 aa7.18□□□□□ -1.26
BRCA2-203ENST00000528762 SWT1Q5T5J6 900 aaKnown RBP7.18□□□□□ -1.26
BRCA2-203ENST00000528762 NYAP1Q6ZVC0 841 aa7.18□□□□□ -1.26
BRCA2-203ENST00000528762 PRKCSHP14314 528 aaPredicted RBP7.17□□□□□ -1.26
BRCA2-203ENST00000528762 APLP1P51693 650 aa7.16□□□□□ -1.26
BRCA2-203ENST00000528762 TTC13Q8NBP0 860 aa7.16□□□□□ -1.26
BRCA2-203ENST00000528762 MTRQ99707 1265 aa7.16□□□□□ -1.26
BRCA2-203ENST00000528762 TJAP1Q5JTD0 557 aa7.15□□□□□ -1.26
BRCA2-203ENST00000528762 ZNF516Q92618 1163 aa7.15□□□□□ -1.26
BRCA2-203ENST00000528762 RBM27Q9P2N5 1060 aaKnown RBP7.15□□□□□ -1.26
BRCA2-203ENST00000528762 COPS2P61201 443 aa7.14□□□□□ -1.27
BRCA2-203ENST00000528762 PTGDRQ13258 359 aa7.14□□□□□ -1.27
BRCA2-203ENST00000528762 IRX2Q9BZI1 471 aaPredicted RBP7.14□□□□□ -1.27
BRCA2-203ENST00000528762 HDGFP51858 240 aaKnown RBP7.13□□□□□ -1.27
BRCA2-203ENST00000528762 EYA1Q99502 592 aa7.13□□□□□ -1.27
BRCA2-203ENST00000528762 NKX2-3Q8TAU0 364 aa7.12□□□□□ -1.27
BRCA2-203ENST00000528762 RBM26Q5T8P6 1007 aaKnown RBP7.11□□□□□ -1.27
BRCA2-203ENST00000528762 P3H3Q8IVL6 736 aa7.11□□□□□ -1.27
BRCA2-203ENST00000528762 RGS20O76081 388 aa7.1□□□□□ -1.27
BRCA2-203ENST00000528762 SLF2Q8IX21 1173 aa7.1□□□□□ -1.27
BRCA2-203ENST00000528762 IL21Q9HBE4 155 aa7.1□□□□□ -1.27
BRCA2-203ENST00000528762 ADGRG1Q9Y653 693 aa7.1□□□□□ -1.27
BRCA2-203ENST00000528762 TPRNQ4KMQ1 711 aa7.08□□□□□ -1.28
BRCA2-203ENST00000528762 PPP1R18Q6NYC8 613 aa7.08□□□□□ -1.28
BRCA2-203ENST00000528762 RCCD1A6NED2 376 aa7.07□□□□□ -1.28
BRCA2-203ENST00000528762 RBM46Q8TBY0 533 aaKnown RBP7.07□□□□□ -1.28
BRCA2-203ENST00000528762 TLL1O43897 1013 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms