RNA–Protein interactions for RNA: ENST00000528427.1

GTF2H1-209, Transcript of general transcription factor IIH subunit 1, humanhuman

TSL 3

Gene GTF2H1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H1-209ENST00000528427 EPAS1Q99814 870 aa12.35□□□□□ -0.43
GTF2H1-209ENST00000528427 DDX12PQ92771 950 aa12.34□□□□□ -0.43
GTF2H1-209ENST00000528427 TSHZ2Q9NRE2 1034 aa12.33□□□□□ -0.44
GTF2H1-209ENST00000528427 WDR70Q9NW82 654 aa12.33□□□□□ -0.44
GTF2H1-209ENST00000528427 SPDYE16A6NNV3 312 aaPredicted RBP12.32□□□□□ -0.44
GTF2H1-209ENST00000528427 HCSTQ9UBK5 93 aa12.32□□□□□ -0.44
GTF2H1-209ENST00000528427 KCTD12Q96CX2 325 aaKnown RBP12.31□□□□□ -0.44
GTF2H1-209ENST00000528427 PROX2Q3B8N5 592 aa12.3□□□□□ -0.44
GTF2H1-209ENST00000528427 C6orf132Q5T0Z8 1188 aa12.3□□□□□ -0.44
GTF2H1-209ENST00000528427 STAC3Q96MF2 364 aa12.3□□□□□ -0.44
GTF2H1-209ENST00000528427 RBM33Q96EV2 1170 aaKnown RBP12.27□□□□□ -0.45
GTF2H1-209ENST00000528427 NBR1Q14596 966 aa12.26□□□□□ -0.45
GTF2H1-209ENST00000528427 EN1Q05925 392 aaPredicted RBP12.25□□□□□ -0.45
GTF2H1-209ENST00000528427 RABGEF1Q9UJ41 708 aa12.25□□□□□ -0.45
GTF2H1-209ENST00000528427 PRIM1P49642 420 aaKnown RBP12.24□□□□□ -0.45
GTF2H1-209ENST00000528427 MRPL50Q8N5N7 158 aaKnown RBP12.24□□□□□ -0.45
GTF2H1-209ENST00000528427 NBPF3Q9H094 633 aa12.23□□□□□ -0.45
GTF2H1-209ENST00000528427 TSR1Q2NL82 804 aaKnown RBP12.22□□□□□ -0.45
GTF2H1-209ENST00000528427 ONECUT3O60422 494 aaPredicted RBP12.2□□□□□ -0.46
GTF2H1-209ENST00000528427 THSD4Q6ZMP0 1018 aa12.2□□□□□ -0.46
GTF2H1-209ENST00000528427 MAP3K7O43318 606 aa12.19□□□□□ -0.46
GTF2H1-209ENST00000528427 KIAA1468Q9P260 1216 aa12.19□□□□□ -0.46
GTF2H1-209ENST00000528427 GRXCR2A6NFK2 248 aa12.18□□□□□ -0.46
GTF2H1-209ENST00000528427 TRIM6-TRIM34B2RNG4 842 aa12.18□□□□□ -0.46
GTF2H1-209ENST00000528427 WNT2BQ93097 391 aa12.18□□□□□ -0.46
GTF2H1-209ENST00000528427 OSBPP22059 807 aa12.17□□□□□ -0.46
GTF2H1-209ENST00000528427 PTPN5P54829 565 aa12.17□□□□□ -0.46
GTF2H1-209ENST00000528427 GOLGA8CPA6NN73 597 aa12.16□□□□□ -0.46
GTF2H1-209ENST00000528427 KCNV2Q8TDN2 545 aa12.16□□□□□ -0.46
GTF2H1-209ENST00000528427 PLA2G2EQ9NZK7 142 aa12.16□□□□□ -0.46
GTF2H1-209ENST00000528427 LAPTM4BQ86VI4 370 aa12.14□□□□□ -0.47
GTF2H1-209ENST00000528427 ARHGEF1Q92888 912 aaKnown RBP12.13□□□□□ -0.47
GTF2H1-209ENST00000528427 TSKSQ9UJT2 592 aa12.13□□□□□ -0.47
GTF2H1-209ENST00000528427 PLCB2Q00722 1185 aa12.12□□□□□ -0.47
GTF2H1-209ENST00000528427 SEPT9Q9UHD8 586 aaPredicted RBP12.12□□□□□ -0.47
GTF2H1-209ENST00000528427 CDHR5Q9HBB8 845 aa12.11□□□□□ -0.47
GTF2H1-209ENST00000528427 FAM198AQ9UFP1 575 aa12.1□□□□□ -0.47
GTF2H1-209ENST00000528427 ANKK1Q8NFD2 765 aa12.09□□□□□ -0.47
GTF2H1-209ENST00000528427 ZFRQ96KR1 1074 aaKnown RBP12.09□□□□□ -0.47
GTF2H1-209ENST00000528427 CDCA7LQ96GN5 454 aa12.08□□□□□ -0.48
GTF2H1-209ENST00000528427 SOWAHBA6NEL2 793 aa12.07□□□□□ -0.48
GTF2H1-209ENST00000528427 BCAMP50895 628 aa12.07□□□□□ -0.48
GTF2H1-209ENST00000528427 PRSS12P56730 875 aa12.07□□□□□ -0.48
GTF2H1-209ENST00000528427 FAM98CQ17RN3 349 aaKnown RBP12.07□□□□□ -0.48
GTF2H1-209ENST00000528427 C3orf80F5H4A9 247 aa12.06□□□□□ -0.48
GTF2H1-209ENST00000528427 MLLT3P42568 568 aaPredicted RBP12.06□□□□□ -0.48
GTF2H1-209ENST00000528427 CERKQ8TCT0 537 aa12.06□□□□□ -0.48
GTF2H1-209ENST00000528427 PACS2Q86VP3 889 aa12.05□□□□□ -0.48
GTF2H1-209ENST00000528427 NPDC1Q9NQX5 325 aaPredicted RBP12.04□□□□□ -0.48
GTF2H1-209ENST00000528427 RBM27Q9P2N5 1060 aaKnown RBP12.01□□□□□ -0.49
GTF2H1-209ENST00000528427 SMAPO00193 183 aa12□□□□□ -0.49
GTF2H1-209ENST00000528427 TTC13Q8NBP0 860 aa12□□□□□ -0.49
GTF2H1-209ENST00000528427 IFFO2Q5TF58 517 aa11.99□□□□□ -0.49
GTF2H1-209ENST00000528427 P3H3Q8IVL6 736 aa11.99□□□□□ -0.49
GTF2H1-209ENST00000528427 WBP1LQ9NX94 342 aa11.98□□□□□ -0.49
GTF2H1-209ENST00000528427 SLC24A1O60721 1099 aa11.97□□□□□ -0.49
GTF2H1-209ENST00000528427 TATDN2Q93075 761 aa11.97□□□□□ -0.49
GTF2H1-209ENST00000528427 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.97□□□□□ -0.49
GTF2H1-209ENST00000528427 LRCH3Q96II8 777 aa11.96□□□□□ -0.49
GTF2H1-209ENST00000528427 NBPF26B4DH59 902 aa11.95□□□□□ -0.5
GTF2H1-209ENST00000528427 PNMA3Q9UL41 463 aa11.95□□□□□ -0.5
GTF2H1-209ENST00000528427 PADI6Q6TGC4 694 aa11.94□□□□□ -0.5
GTF2H1-209ENST00000528427 NYAP1Q6ZVC0 841 aa11.94□□□□□ -0.5
GTF2H1-209ENST00000528427 TSR3Q9UJK0 312 aaKnown RBP11.94□□□□□ -0.5
GTF2H1-209ENST00000528427 SEMA3EO15041 775 aa11.93□□□□□ -0.5
GTF2H1-209ENST00000528427 ITGBL1O95965 494 aaPredicted RBP11.93□□□□□ -0.5
GTF2H1-209ENST00000528427 NUDT18Q6ZVK8 323 aa11.93□□□□□ -0.5
GTF2H1-209ENST00000528427 HPS5Q9UPZ3 1129 aa11.93□□□□□ -0.5
GTF2H1-209ENST00000528427 SAMD7Q7Z3H4 446 aa11.92□□□□□ -0.5
GTF2H1-209ENST00000528427 PTGDRQ13258 359 aa11.9□□□□□ -0.5
GTF2H1-209ENST00000528427 HAP1P54257 671 aaPredicted RBP11.88□□□□□ -0.51
GTF2H1-209ENST00000528427 A0A0G2JS52 829 aa11.87□□□□□ -0.51
GTF2H1-209ENST00000528427 KDM2AQ9Y2K7 1162 aa11.87□□□□□ -0.51
GTF2H1-209ENST00000528427 EYA1Q99502 592 aa11.86□□□□□ -0.51
GTF2H1-209ENST00000528427 TESPA1A2RU30 521 aaPredicted RBP11.85□□□□□ -0.51
GTF2H1-209ENST00000528427 PPP4CP60510 307 aa11.85□□□□□ -0.51
GTF2H1-209ENST00000528427 NUTM2FA1L443 756 aa11.82□□□□□ -0.52
GTF2H1-209ENST00000528427 SWT1Q5T5J6 900 aaKnown RBP11.8□□□□□ -0.52
GTF2H1-209ENST00000528427 KCNC4Q03721 635 aa11.79□□□□□ -0.52
GTF2H1-209ENST00000528427 VSIG10Q8N0Z9 540 aa11.79□□□□□ -0.52
GTF2H1-209ENST00000528427 ADGRG1Q9Y653 693 aa11.79□□□□□ -0.52
GTF2H1-209ENST00000528427 RGS20O76081 388 aa11.78□□□□□ -0.52
GTF2H1-209ENST00000528427 FCHSD2O94868 740 aa11.77□□□□□ -0.53
GTF2H1-209ENST00000528427 TJAP1Q5JTD0 557 aa11.77□□□□□ -0.53
GTF2H1-209ENST00000528427 RBM26Q5T8P6 1007 aaKnown RBP11.77□□□□□ -0.53
GTF2H1-209ENST00000528427 RNF40O75150 1001 aa11.76□□□□□ -0.53
GTF2H1-209ENST00000528427 APLP1P51693 650 aa11.76□□□□□ -0.53
GTF2H1-209ENST00000528427 HDGFP51858 240 aaKnown RBP11.76□□□□□ -0.53
GTF2H1-209ENST00000528427 FAM161AQ3B820 660 aa11.75□□□□□ -0.53
GTF2H1-209ENST00000528427 SLF2Q8IX21 1173 aa11.74□□□□□ -0.53
GTF2H1-209ENST00000528427 GPR37O15354 613 aa11.73□□□□□ -0.53
GTF2H1-209ENST00000528427 MTRQ99707 1265 aa11.73□□□□□ -0.53
GTF2H1-209ENST00000528427 DNAJB2P25686 324 aa11.72□□□□□ -0.53
GTF2H1-209ENST00000528427 RBM46Q8TBY0 533 aaKnown RBP11.72□□□□□ -0.53
GTF2H1-209ENST00000528427 SMYD5Q6GMV2 418 aa11.71□□□□□ -0.53
GTF2H1-209ENST00000528427 TMEM134Q9H6X4 195 aa11.71□□□□□ -0.53
GTF2H1-209ENST00000528427 HIC1Q14526 733 aa11.7□□□□□ -0.54
GTF2H1-209ENST00000528427 RCCD1A6NED2 376 aa11.69□□□□□ -0.54
GTF2H1-209ENST00000528427 NECTIN2Q92692 538 aa11.69□□□□□ -0.54
GTF2H1-209ENST00000528427 IL21Q9HBE4 155 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms