RNA–Protein interactions for RNA: ENST00000527683.1

LINC01001-202, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 1 (best)

Gene LINC01001, Length 683 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-202ENST00000527683 KIAA0586Q9BVV6 1533 aa9.78□□□□□ -0.84
LINC01001-202ENST00000527683 PTPRGP23470 1445 aa9.78□□□□□ -0.84
LINC01001-202ENST00000527683 SNPHO15079 494 aa9.77□□□□□ -0.85
LINC01001-202ENST00000527683 TTBK1Q5TCY1 1321 aaPredicted RBP9.77□□□□□ -0.85
LINC01001-202ENST00000527683 BIVM-ERCC5R4GMW8 1640 aa9.76□□□□□ -0.85
LINC01001-202ENST00000527683 CRISPLD2Q9H0B8 497 aa9.76□□□□□ -0.85
LINC01001-202ENST00000527683 CARMIL1Q5VZK9 1371 aa9.75□□□□□ -0.85
LINC01001-202ENST00000527683 GPR153Q6NV75 609 aa9.75□□□□□ -0.85
LINC01001-202ENST00000527683 KHSRPQ92945 711 aaKnown RBP eCLIP9.75□□□□□ -0.85
LINC01001-202ENST00000527683 GPHNQ9NQX3 736 aaPredicted RBP9.75□□□□□ -0.85
LINC01001-202ENST00000527683 KIF27Q86VH2 1401 aa9.74□□□□□ -0.85
LINC01001-202ENST00000527683 MAPKBP1O60336 1514 aa9.74□□□□□ -0.85
LINC01001-202ENST00000527683 DSG2Q14126 1118 aa9.74□□□□□ -0.85
LINC01001-202ENST00000527683 HOXB1P14653 301 aaPredicted RBP9.72□□□□□ -0.85
LINC01001-202ENST00000527683 FOXK1P85037 733 aa9.72□□□□□ -0.85
LINC01001-202ENST00000527683 TMC2Q8TDI7 906 aa9.72□□□□□ -0.85
LINC01001-202ENST00000527683 RYDENQ9NUL5 291 aaKnown RBP9.72□□□□□ -0.85
LINC01001-202ENST00000527683 TNIKQ9UKE5 1360 aa9.72□□□□□ -0.85
LINC01001-202ENST00000527683 DOK7Q18PE1 504 aa9.7□□□□□ -0.86
LINC01001-202ENST00000527683 ARSIQ5FYB1 569 aa9.7□□□□□ -0.86
LINC01001-202ENST00000527683 PLPP6Q8IY26 295 aa9.69□□□□□ -0.86
LINC01001-202ENST00000527683 ADCY10Q96PN6 1610 aa9.69□□□□□ -0.86
LINC01001-202ENST00000527683 KIF13AQ9H1H9 1805 aa9.69□□□□□ -0.86
LINC01001-202ENST00000527683 DIP2BQ9P265 1576 aa9.68□□□□□ -0.86
LINC01001-202ENST00000527683 RUSC2Q8N2Y8 1516 aa9.68□□□□□ -0.86
LINC01001-202ENST00000527683 CARMIL2Q6F5E8 1435 aa9.68□□□□□ -0.86
LINC01001-202ENST00000527683 ASXL2Q76L83 1435 aa9.68□□□□□ -0.86
LINC01001-202ENST00000527683 PAXIP1Q6ZW49 1069 aaPredicted RBP9.68□□□□□ -0.86
LINC01001-202ENST00000527683 SPRYD3Q8NCJ5 442 aa9.68□□□□□ -0.86
LINC01001-202ENST00000527683 COL17A1Q9UMD9 1497 aaPredicted RBP9.67□□□□□ -0.86
LINC01001-202ENST00000527683 SLC34A2O95436 690 aa9.67□□□□□ -0.86
LINC01001-202ENST00000527683 PLB1Q6P1J6 1458 aa9.66□□□□□ -0.86
LINC01001-202ENST00000527683 UACAQ9BZF9 1416 aa9.66□□□□□ -0.86
LINC01001-202ENST00000527683 ZNF710Q8N1W2 664 aa9.66□□□□□ -0.86
LINC01001-202ENST00000527683 ABCC2Q92887 1545 aa9.66□□□□□ -0.86
LINC01001-202ENST00000527683 EMP3P54852 163 aa9.65□□□□□ -0.86
LINC01001-202ENST00000527683 CFAP44Q96MT7 982 aa9.65□□□□□ -0.86
LINC01001-202ENST00000527683 FAM205CA6NFA0 338 aa9.64□□□□□ -0.87
LINC01001-202ENST00000527683 MFSD10Q14728 455 aa9.64□□□□□ -0.87
LINC01001-202ENST00000527683 CDAN1Q8IWY9 1227 aa9.64□□□□□ -0.87
LINC01001-202ENST00000527683 HS3ST6Q96QI5 342 aa9.64□□□□□ -0.87
LINC01001-202ENST00000527683 LARP6Q9BRS8 491 aaKnown RBP9.64□□□□□ -0.87
LINC01001-202ENST00000527683 ZSWIM6Q9HCJ5 1215 aa9.64□□□□□ -0.87
LINC01001-202ENST00000527683 PCDHGA4Q9Y5G9 962 aa9.64□□□□□ -0.87
LINC01001-202ENST00000527683 UHRF1BP1LA0JNW5 1464 aa9.64□□□□□ -0.87
LINC01001-202ENST00000527683 PPP1R15BQ5SWA1 713 aa9.62□□□□□ -0.87
LINC01001-202ENST00000527683 PTCD2Q8WV60 388 aaKnown RBP9.62□□□□□ -0.87
LINC01001-202ENST00000527683 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.62□□□□□ -0.87
LINC01001-202ENST00000527683 KDM6BO15054 1643 aa9.62□□□□□ -0.87
LINC01001-202ENST00000527683 DISP1Q96F81 1524 aa9.61□□□□□ -0.87
LINC01001-202ENST00000527683 NUDT7P0C024 238 aa9.61□□□□□ -0.87
LINC01001-202ENST00000527683 PDE4AP27815 886 aa9.61□□□□□ -0.87
LINC01001-202ENST00000527683 KCNH8Q96L42 1107 aa9.61□□□□□ -0.87
LINC01001-202ENST00000527683 EPRSP07814 1512 aaKnown RBP9.6□□□□□ -0.87
LINC01001-202ENST00000527683 GLI2P10070 1586 aa9.59□□□□□ -0.87
LINC01001-202ENST00000527683 RIMBP2O15034 1052 aa9.59□□□□□ -0.87
LINC01001-202ENST00000527683 OXER1Q8TDS5 423 aa9.59□□□□□ -0.87
LINC01001-202ENST00000527683 KRTAP3-3Q9BYR6 98 aa9.59□□□□□ -0.87
LINC01001-202ENST00000527683 KRTAP3-2Q9BYR7 98 aa9.59□□□□□ -0.87
LINC01001-202ENST00000527683 EMILIN3Q9NT22 766 aa9.59□□□□□ -0.87
LINC01001-202ENST00000527683 KDM5BQ9UGL1 1544 aa9.59□□□□□ -0.87
LINC01001-202ENST00000527683 VARS2Q5ST30 1063 aaKnown RBP9.57□□□□□ -0.88
LINC01001-202ENST00000527683 DDX27Q96GQ7 796 aaKnown RBP9.57□□□□□ -0.88
LINC01001-202ENST00000527683 TSHZ2Q9NRE2 1034 aa9.57□□□□□ -0.88
LINC01001-202ENST00000527683 ADGRL1O94910 1474 aa9.57□□□□□ -0.88
LINC01001-202ENST00000527683 RAPGEF2Q9Y4G8 1499 aa9.57□□□□□ -0.88
LINC01001-202ENST00000527683 CUL7Q14999 1698 aa9.56□□□□□ -0.88
LINC01001-202ENST00000527683 UPF1Q92900 1129 aaKnown RBP eCLIP9.56□□□□□ -0.88
LINC01001-202ENST00000527683 LHX6Q9UPM6 363 aa9.56□□□□□ -0.88
LINC01001-202ENST00000527683 ERBB3P21860 1342 aa9.56□□□□□ -0.88
LINC01001-202ENST00000527683 UGGT2Q9NYU1 1516 aa9.55□□□□□ -0.88
LINC01001-202ENST00000527683 IQGAP2Q13576 1575 aa9.54□□□□□ -0.88
LINC01001-202ENST00000527683 TSPOAP1O95153 1857 aa9.54□□□□□ -0.88
LINC01001-202ENST00000527683 ZNF316A6NFI3 1004 aaPredicted RBP9.54□□□□□ -0.88
LINC01001-202ENST00000527683 POTEEQ6S8J3 1075 aa9.54□□□□□ -0.88
LINC01001-202ENST00000527683 CD109Q6YHK3 1445 aa9.54□□□□□ -0.88
LINC01001-202ENST00000527683 PCDH10Q9P2E7 1040 aa9.53□□□□□ -0.88
LINC01001-202ENST00000527683 TEX14Q8IWB6 1497 aa9.53□□□□□ -0.88
LINC01001-202ENST00000527683 CAMK2BQ13554 666 aa9.52□□□□□ -0.89
LINC01001-202ENST00000527683 WDR7Q9Y4E6 1490 aa9.52□□□□□ -0.89
LINC01001-202ENST00000527683 ARID3CA6NKF2 412 aa9.51□□□□□ -0.89
LINC01001-202ENST00000527683 P3H3Q8IVL6 736 aa9.51□□□□□ -0.89
LINC01001-202ENST00000527683 PPRC1Q5VV67 1664 aaKnown RBP9.51□□□□□ -0.89
LINC01001-202ENST00000527683 ZNF687Q8N1G0 1237 aa9.49□□□□□ -0.89
LINC01001-202ENST00000527683 MAGI3Q5TCQ9 1506 aa9.49□□□□□ -0.89
LINC01001-202ENST00000527683 RAPGEF3O95398 923 aa9.48□□□□□ -0.89
LINC01001-202ENST00000527683 FAM9AQ8IZU1 332 aaPredicted RBP9.48□□□□□ -0.89
LINC01001-202ENST00000527683 MAP3K4Q9Y6R4 1608 aa9.46□□□□□ -0.89
LINC01001-202ENST00000527683 PLCB2Q00722 1185 aa9.46□□□□□ -0.9
LINC01001-202ENST00000527683 ANO8Q9HCE9 1232 aaPredicted RBP9.46□□□□□ -0.9
LINC01001-202ENST00000527683 ATP10BO94823 1461 aa9.46□□□□□ -0.9
LINC01001-202ENST00000527683 GOLGA3Q08378 1498 aa9.46□□□□□ -0.9
LINC01001-202ENST00000527683 PRXQ9BXM0 1461 aa9.46□□□□□ -0.9
LINC01001-202ENST00000527683 KIAA0556O60303 1618 aa9.45□□□□□ -0.9
LINC01001-202ENST00000527683 FBXO41Q8TF61 875 aa9.45□□□□□ -0.9
LINC01001-202ENST00000527683 PHLDB1Q86UU1 1377 aa9.45□□□□□ -0.9
LINC01001-202ENST00000527683 AXIN2Q9Y2T1 843 aa9.44□□□□□ -0.9
LINC01001-202ENST00000527683 ZCCHC11Q5TAX3 1644 aaKnown RBP9.44□□□□□ -0.9
LINC01001-202ENST00000527683 ABCA8O94911 1581 aa9.43□□□□□ -0.9
LINC01001-202ENST00000527683 HECW2Q9P2P5 1572 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms