RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 PHF14O94880 888 aa8.97□□□□□ -0.97
CLNS1A-209ENST00000527299 TYW1BQ6NUM6 668 aa8.97□□□□□ -0.97
CLNS1A-209ENST00000527299 LAPTM4BQ86VI4 370 aa8.97□□□□□ -0.97
CLNS1A-209ENST00000527299 FBXW7Q969H0 707 aa8.97□□□□□ -0.97
CLNS1A-209ENST00000527299 SOWAHBA6NEL2 793 aa8.94□□□□□ -0.98
CLNS1A-209ENST00000527299 ONECUT3O60422 494 aaPredicted RBP8.94□□□□□ -0.98
CLNS1A-209ENST00000527299 BCAMP50895 628 aa8.94□□□□□ -0.98
CLNS1A-209ENST00000527299 KIAA1468Q9P260 1216 aa8.93□□□□□ -0.98
CLNS1A-209ENST00000527299 NYAP1Q6ZVC0 841 aa8.92□□□□□ -0.98
CLNS1A-209ENST00000527299 ZFRQ96KR1 1074 aaKnown RBP8.92□□□□□ -0.98
CLNS1A-209ENST00000527299 CADPS2Q86UW7 1296 aa8.91□□□□□ -0.98
CLNS1A-209ENST00000527299 C6orf132Q5T0Z8 1188 aa8.9□□□□□ -0.98
CLNS1A-209ENST00000527299 CAMK2BQ13554 666 aa8.89□□□□□ -0.99
CLNS1A-209ENST00000527299 EPAS1Q99814 870 aa8.89□□□□□ -0.99
CLNS1A-209ENST00000527299 WBP1LQ9NX94 342 aa8.89□□□□□ -0.99
CLNS1A-209ENST00000527299 TRIM6-TRIM34B2RNG4 842 aa8.87□□□□□ -0.99
CLNS1A-209ENST00000527299 SEPT9Q9UHD8 586 aaPredicted RBP8.87□□□□□ -0.99
CLNS1A-209ENST00000527299 KCNC4Q03721 635 aa8.86□□□□□ -0.99
CLNS1A-209ENST00000527299 FAM98CQ17RN3 349 aaKnown RBP8.85□□□□□ -0.99
CLNS1A-209ENST00000527299 DPYSL4O14531 572 aa8.84□□□□□ -0.99
CLNS1A-209ENST00000527299 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.83□□□□□ -1
CLNS1A-209ENST00000527299 TSR3Q9UJK0 312 aaKnown RBP8.82□□□□□ -1
CLNS1A-209ENST00000527299 Q6ZNB5 142 aa8.81□□□□□ -1
CLNS1A-209ENST00000527299 RBM33Q96EV2 1170 aaKnown RBP8.81□□□□□ -1
CLNS1A-209ENST00000527299 HPS5Q9UPZ3 1129 aa8.81□□□□□ -1
CLNS1A-209ENST00000527299 LRCH3Q96II8 777 aa8.8□□□□□ -1
CLNS1A-209ENST00000527299 DDX12PQ92771 950 aa8.79□□□□□ -1
CLNS1A-209ENST00000527299 TSKSQ9UJT2 592 aa8.78□□□□□ -1
CLNS1A-209ENST00000527299 DCAF8L2P0C7V8 631 aa8.77□□□□□ -1.01
CLNS1A-209ENST00000527299 EN1Q05925 392 aaPredicted RBP8.77□□□□□ -1.01
CLNS1A-209ENST00000527299 LAPTM4AQ15012 233 aa8.76□□□□□ -1.01
CLNS1A-209ENST00000527299 TSR1Q2NL82 804 aaKnown RBP8.76□□□□□ -1.01
CLNS1A-209ENST00000527299 PACS2Q86VP3 889 aa8.76□□□□□ -1.01
CLNS1A-209ENST00000527299 NBR1Q14596 966 aa8.74□□□□□ -1.01
CLNS1A-209ENST00000527299 MAP3K7O43318 606 aa8.73□□□□□ -1.01
CLNS1A-209ENST00000527299 PPP4CP60510 307 aa8.73□□□□□ -1.01
CLNS1A-209ENST00000527299 PDIA6Q15084 440 aa8.73□□□□□ -1.01
CLNS1A-209ENST00000527299 TJAP1Q5JTD0 557 aa8.73□□□□□ -1.01
CLNS1A-209ENST00000527299 LCE2BO14633 110 aa8.72□□□□□ -1.01
CLNS1A-209ENST00000527299 CDCA7LQ96GN5 454 aa8.71□□□□□ -1.02
CLNS1A-209ENST00000527299 SPDYE16A6NNV3 312 aaPredicted RBP8.7□□□□□ -1.02
CLNS1A-209ENST00000527299 GFRA3O60609 400 aa8.7□□□□□ -1.02
CLNS1A-209ENST00000527299 SAMD7Q7Z3H4 446 aa8.7□□□□□ -1.02
CLNS1A-209ENST00000527299 FAM198AQ9UFP1 575 aa8.7□□□□□ -1.02
CLNS1A-209ENST00000527299 SMAPO00193 183 aa8.69□□□□□ -1.02
CLNS1A-209ENST00000527299 PRSS12P56730 875 aa8.69□□□□□ -1.02
CLNS1A-209ENST00000527299 CERKQ8TCT0 537 aa8.69□□□□□ -1.02
CLNS1A-209ENST00000527299 TRAF7Q6Q0C0 670 aa8.68□□□□□ -1.02
CLNS1A-209ENST00000527299 C3orf80F5H4A9 247 aa8.67□□□□□ -1.02
CLNS1A-209ENST00000527299 PRIM1P49642 420 aaKnown RBP8.67□□□□□ -1.02
CLNS1A-209ENST00000527299 MTRQ99707 1265 aa8.67□□□□□ -1.02
CLNS1A-209ENST00000527299 PRKD2Q9BZL6 878 aa8.67□□□□□ -1.02
CLNS1A-209ENST00000527299 IL21Q9HBE4 155 aa8.67□□□□□ -1.02
CLNS1A-209ENST00000527299 PPP1R18Q6NYC8 613 aa8.66□□□□□ -1.02
CLNS1A-209ENST00000527299 TATDN2Q93075 761 aa8.66□□□□□ -1.02
CLNS1A-209ENST00000527299 NBPF26B4DH59 902 aa8.64□□□□□ -1.03
CLNS1A-209ENST00000527299 PNMA3Q9UL41 463 aa8.64□□□□□ -1.03
CLNS1A-209ENST00000527299 ARIH1Q9Y4X5 557 aaPredicted RBP8.64□□□□□ -1.03
CLNS1A-209ENST00000527299 V9GY48 417 aaPredicted RBP8.64□□□□□ -1.03
CLNS1A-209ENST00000527299 NRG2O14511 850 aaPredicted RBP8.63□□□□□ -1.03
CLNS1A-209ENST00000527299 BBXQ8WY36 941 aaPredicted RBP8.63□□□□□ -1.03
CLNS1A-209ENST00000527299 ZNF516Q92618 1163 aa8.62□□□□□ -1.03
CLNS1A-209ENST00000527299 E2F4Q16254 413 aa8.61□□□□□ -1.03
CLNS1A-209ENST00000527299 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.61□□□□□ -1.03
CLNS1A-209ENST00000527299 RBM27Q9P2N5 1060 aaKnown RBP8.61□□□□□ -1.03
CLNS1A-209ENST00000527299 GRXCR2A6NFK2 248 aa8.6□□□□□ -1.03
CLNS1A-209ENST00000527299 APLP1P51693 650 aa8.6□□□□□ -1.03
CLNS1A-209ENST00000527299 NUDT18Q6ZVK8 323 aa8.6□□□□□ -1.03
CLNS1A-209ENST00000527299 OSBPP22059 807 aa8.59□□□□□ -1.03
CLNS1A-209ENST00000527299 CDHR5Q9HBB8 845 aa8.59□□□□□ -1.03
CLNS1A-209ENST00000527299 HDGFP51858 240 aaKnown RBP8.58□□□□□ -1.04
CLNS1A-209ENST00000527299 TTC13Q8NBP0 860 aa8.57□□□□□ -1.04
CLNS1A-209ENST00000527299 RNF40O75150 1001 aa8.56□□□□□ -1.04
CLNS1A-209ENST00000527299 NKX2-3Q8TAU0 364 aa8.56□□□□□ -1.04
CLNS1A-209ENST00000527299 NECTIN2Q92692 538 aa8.55□□□□□ -1.04
CLNS1A-209ENST00000527299 SPRYD3Q8NCJ5 442 aa8.54□□□□□ -1.04
CLNS1A-209ENST00000527299 PDZRN3Q9UPQ7 1066 aa8.54□□□□□ -1.04
CLNS1A-209ENST00000527299 SWT1Q5T5J6 900 aaKnown RBP8.53□□□□□ -1.04
CLNS1A-209ENST00000527299 TMUB1Q9BVT8 246 aa8.53□□□□□ -1.04
CLNS1A-209ENST00000527299 NPDC1Q9NQX5 325 aaPredicted RBP8.53□□□□□ -1.04
CLNS1A-209ENST00000527299 GGCXP38435 758 aa8.52□□□□□ -1.05
CLNS1A-209ENST00000527299 SLF2Q8IX21 1173 aa8.52□□□□□ -1.05
CLNS1A-209ENST00000527299 COPS2P61201 443 aa8.51□□□□□ -1.05
CLNS1A-209ENST00000527299 ZNF787Q6DD87 383 aa8.51□□□□□ -1.05
CLNS1A-209ENST00000527299 PADI6Q6TGC4 694 aa8.51□□□□□ -1.05
CLNS1A-209ENST00000527299 ZPR1O75312 459 aa8.5□□□□□ -1.05
CLNS1A-209ENST00000527299 WDR70Q9NW82 654 aa8.5□□□□□ -1.05
CLNS1A-209ENST00000527299 EYA1Q99502 592 aa8.49□□□□□ -1.05
CLNS1A-209ENST00000527299 SLC4A3P48751 1232 aa8.46□□□□□ -1.06
CLNS1A-209ENST00000527299 PRR14Q9BWN1 585 aa8.46□□□□□ -1.06
CLNS1A-209ENST00000527299 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.46□□□□□ -1.06
CLNS1A-209ENST00000527299 TRIM67Q6ZTA4 783 aa8.45□□□□□ -1.06
CLNS1A-209ENST00000527299 EMID1Q96A84 441 aaPredicted RBP8.45□□□□□ -1.06
CLNS1A-209ENST00000527299 RNF223E7ERA6 249 aa8.44□□□□□ -1.06
CLNS1A-209ENST00000527299 ZNF775Q96BV0 537 aaPredicted RBP8.44□□□□□ -1.06
CLNS1A-209ENST00000527299 PCDHB3Q9Y5E6 796 aa8.44□□□□□ -1.06
CLNS1A-209ENST00000527299 SLC19A1P41440 591 aa8.43□□□□□ -1.06
CLNS1A-209ENST00000527299 BLOC1S3Q6QNY0 202 aa8.42□□□□□ -1.06
CLNS1A-209ENST00000527299 SPRYD7Q5W111 196 aa8.4□□□□□ -1.06
CLNS1A-209ENST00000527299 PAXIP1Q6ZW49 1069 aaPredicted RBP8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms