RNA–Protein interactions for RNA: ENST00000527079.2

PTPMT1-204, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best)

Gene PTPMT1, Length 2,272 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-204ENST00000527079 CCDC144AA2RUR9 1427 aa14.75□□□□□ -0.05
PTPMT1-204ENST00000527079 DCAF11Q8TEB1 546 aa14.75□□□□□ -0.05
PTPMT1-204ENST00000527079 IQGAP3Q86VI3 1631 aa14.75□□□□□ -0.05
PTPMT1-204ENST00000527079 DUOX2Q9NRD8 1548 aa14.74□□□□□ -0.05
PTPMT1-204ENST00000527079 KTN1Q86UP2 1357 aaKnown RBP14.73□□□□□ -0.05
PTPMT1-204ENST00000527079 ERCC6L2Q5T890 1561 aa14.73□□□□□ -0.05
PTPMT1-204ENST00000527079 UHRF1BP1LA0JNW5 1464 aa14.73□□□□□ -0.05
PTPMT1-204ENST00000527079 TRPM1Q7Z4N2 1603 aa14.73□□□□□ -0.05
PTPMT1-204ENST00000527079 KDM2AQ9Y2K7 1162 aa14.72□□□□□ -0.05
PTPMT1-204ENST00000527079 PRAG1Q86YV5 1406 aa14.72□□□□□ -0.05
PTPMT1-204ENST00000527079 MAGI2Q86UL8 1455 aa14.72□□□□□ -0.05
PTPMT1-204ENST00000527079 ERBINQ96RT1 1412 aa14.72□□□□□ -0.05
PTPMT1-204ENST00000527079 POLR3GLQ9BT43 218 aa14.72□□□□□ -0.05
PTPMT1-204ENST00000527079 PLCH2O75038 1416 aa14.71□□□□□ -0.05
PTPMT1-204ENST00000527079 ST20-MTHFSA0A0A6YYL1 179 aa14.71□□□□□ -0.05
PTPMT1-204ENST00000527079 LAMC1P11047 1609 aa14.71□□□□□ -0.05
PTPMT1-204ENST00000527079 ATP10AO60312 1499 aa14.71□□□□□ -0.05
PTPMT1-204ENST00000527079 E9PCH4 1651 aa14.71□□□□□ -0.06
PTPMT1-204ENST00000527079 CLASP1Q7Z460 1538 aa14.7□□□□□ -0.06
PTPMT1-204ENST00000527079 PLA2R1Q13018 1463 aa14.7□□□□□ -0.06
PTPMT1-204ENST00000527079 ZCCHC11Q5TAX3 1644 aaKnown RBP14.7□□□□□ -0.06
PTPMT1-204ENST00000527079 GPRASP1Q5JY77 1395 aa14.69□□□□□ -0.06
PTPMT1-204ENST00000527079 PPP4R2Q9NY27 417 aa14.68□□□□□ -0.06
PTPMT1-204ENST00000527079 EFCAB2Q5VUJ9 269 aa14.68□□□□□ -0.06
PTPMT1-204ENST00000527079 SMG6Q86US8 1419 aaKnown RBP14.68□□□□□ -0.06
PTPMT1-204ENST00000527079 EIF2AK4Q9P2K8 1649 aaKnown RBP14.67□□□□□ -0.06
PTPMT1-204ENST00000527079 ABCC1P33527 1531 aa14.67□□□□□ -0.06
PTPMT1-204ENST00000527079 RALBP1Q15311 655 aa14.67□□□□□ -0.06
PTPMT1-204ENST00000527079 A2MP01023 1474 aa14.66□□□□□ -0.06
PTPMT1-204ENST00000527079 IRX6P78412 446 aaPredicted RBP14.66□□□□□ -0.06
PTPMT1-204ENST00000527079 RBM19Q9Y4C8 960 aaKnown RBP14.66□□□□□ -0.06
PTPMT1-204ENST00000527079 ARAP3Q8WWN8 1544 aa14.66□□□□□ -0.06
PTPMT1-204ENST00000527079 PNISRQ8TF01 805 aaKnown RBP14.66□□□□□ -0.06
PTPMT1-204ENST00000527079 BRD4O60885 1362 aaPredicted RBP14.66□□□□□ -0.06
PTPMT1-204ENST00000527079 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.65□□□□□ -0.06
PTPMT1-204ENST00000527079 TMC1Q8TDI8 760 aa14.64□□□□□ -0.07
PTPMT1-204ENST00000527079 PRDM15P57071 1507 aaPredicted RBP14.64□□□□□ -0.07
PTPMT1-204ENST00000527079 MYBBP1AQ9BQG0 1328 aaKnown RBP14.64□□□□□ -0.07
PTPMT1-204ENST00000527079 RTEL1-TNFRSF6BF6WH68 1400 aa14.62□□□□□ -0.07
PTPMT1-204ENST00000527079 NUDCQ9Y266 331 aa14.62□□□□□ -0.07
PTPMT1-204ENST00000527079 LRPPRCP42704 1394 aaKnown RBP14.62□□□□□ -0.07
PTPMT1-204ENST00000527079 RGL3Q3MIN7 710 aa14.62□□□□□ -0.07
PTPMT1-204ENST00000527079 COL17A1Q9UMD9 1497 aaPredicted RBP14.61□□□□□ -0.07
PTPMT1-204ENST00000527079 WASHC2CQ9Y4E1 1318 aa14.6□□□□□ -0.07
PTPMT1-204ENST00000527079 TRAPPC8Q9Y2L5 1435 aa14.6□□□□□ -0.07
PTPMT1-204ENST00000527079 CNGB1Q14028 1251 aaPredicted RBP14.59□□□□□ -0.07
PTPMT1-204ENST00000527079 NBPF1Q3BBV0 1214 aa14.59□□□□□ -0.07
PTPMT1-204ENST00000527079 RNF123Q5XPI4 1314 aa14.59□□□□□ -0.07
PTPMT1-204ENST00000527079 PARD3Q8TEW0 1356 aa14.58□□□□□ -0.08
PTPMT1-204ENST00000527079 RNF17Q9BXT8 1623 aaKnown RBP14.58□□□□□ -0.08
PTPMT1-204ENST00000527079 ZFYVE16Q7Z3T8 1539 aa14.57□□□□□ -0.08
PTPMT1-204ENST00000527079 SPAG9O60271 1321 aaKnown RBP14.57□□□□□ -0.08
PTPMT1-204ENST00000527079 NLRP13Q86W25 1043 aa14.57□□□□□ -0.08
PTPMT1-204ENST00000527079 STAC3Q96MF2 364 aa14.57□□□□□ -0.08
PTPMT1-204ENST00000527079 TESK2Q96S53 571 aa14.57□□□□□ -0.08
PTPMT1-204ENST00000527079 ANP32EQ9BTT0 268 aa14.57□□□□□ -0.08
PTPMT1-204ENST00000527079 DEPDC5O75140 1603 aa14.56□□□□□ -0.08
PTPMT1-204ENST00000527079 TRPM2O94759 1503 aa14.55□□□□□ -0.08
PTPMT1-204ENST00000527079 PER1O15534 1290 aaPredicted RBP14.55□□□□□ -0.08
PTPMT1-204ENST00000527079 CEP152O94986 1710 aa14.54□□□□□ -0.08
PTPMT1-204ENST00000527079 TMF1P82094 1093 aa14.54□□□□□ -0.08
PTPMT1-204ENST00000527079 SPHKAPQ2M3C7 1700 aa14.54□□□□□ -0.08
PTPMT1-204ENST00000527079 INSRP06213 1382 aa14.54□□□□□ -0.08
PTPMT1-204ENST00000527079 WDR7Q9Y4E6 1490 aa14.53□□□□□ -0.08
PTPMT1-204ENST00000527079 ABCA9Q8IUA7 1624 aa14.53□□□□□ -0.08
PTPMT1-204ENST00000527079 PTPRTO14522 1441 aa14.53□□□□□ -0.08
PTPMT1-204ENST00000527079 DISP3Q9P2K9 1392 aa14.53□□□□□ -0.08
PTPMT1-204ENST00000527079 MADDQ8WXG6 1647 aa14.53□□□□□ -0.08
PTPMT1-204ENST00000527079 TET3O43151 1660 aa14.53□□□□□ -0.08
PTPMT1-204ENST00000527079 ZMYM4Q5VZL5 1548 aa14.53□□□□□ -0.08
PTPMT1-204ENST00000527079 INO80Q9ULG1 1556 aaPredicted RBP14.52□□□□□ -0.09
PTPMT1-204ENST00000527079 FANCIQ9NVI1 1328 aa14.52□□□□□ -0.09
PTPMT1-204ENST00000527079 B4GALNT3Q6L9W6 998 aa14.51□□□□□ -0.09
PTPMT1-204ENST00000527079 ATP7AQ04656 1500 aa14.51□□□□□ -0.09
PTPMT1-204ENST00000527079 IQGAP1P46940 1657 aa14.5□□□□□ -0.09
PTPMT1-204ENST00000527079 AFAP1Q8N556 730 aa14.5□□□□□ -0.09
PTPMT1-204ENST00000527079 VWDEQ8N2E2 1590 aa14.5□□□□□ -0.09
PTPMT1-204ENST00000527079 NEURL4Q96JN8 1562 aa14.5□□□□□ -0.09
PTPMT1-204ENST00000527079 FANCAO15360 1455 aa14.5□□□□□ -0.09
PTPMT1-204ENST00000527079 KANK1Q14678 1352 aa14.5□□□□□ -0.09
PTPMT1-204ENST00000527079 SCAPERQ9BY12 1400 aa14.49□□□□□ -0.09
PTPMT1-204ENST00000527079 PDE3BQ13370 1112 aa14.49□□□□□ -0.09
PTPMT1-204ENST00000527079 CLTCL1P53675 1640 aa14.48□□□□□ -0.09
PTPMT1-204ENST00000527079 PANK3Q9H999 370 aa14.48□□□□□ -0.09
PTPMT1-204ENST00000527079 KIAA1210Q9ULL0 1709 aa14.47□□□□□ -0.09
PTPMT1-204ENST00000527079 SCAF11Q99590 1463 aaKnown RBP14.46□□□□□ -0.09
PTPMT1-204ENST00000527079 CDCA8Q53HL2 280 aa14.46□□□□□ -0.09
PTPMT1-204ENST00000527079 ADGRL1O94910 1474 aa14.45□□□□□ -0.1
PTPMT1-204ENST00000527079 BLMP54132 1417 aaPredicted RBP14.44□□□□□ -0.1
PTPMT1-204ENST00000527079 SYNMO15061 1565 aa14.43□□□□□ -0.1
PTPMT1-204ENST00000527079 CC2D1BQ5T0F9 858 aaKnown RBP14.43□□□□□ -0.1
PTPMT1-204ENST00000527079 CCDC136Q96JN2 1154 aa14.43□□□□□ -0.1
PTPMT1-204ENST00000527079 EIF3AQ14152 1382 aaKnown RBP14.42□□□□□ -0.1
PTPMT1-204ENST00000527079 MROH1Q8NDA8 1641 aa14.42□□□□□ -0.1
PTPMT1-204ENST00000527079 SLC24A1O60721 1099 aa14.41□□□□□ -0.1
PTPMT1-204ENST00000527079 KIF3BO15066 747 aa14.41□□□□□ -0.1
PTPMT1-204ENST00000527079 ASXL2Q76L83 1435 aa14.41□□□□□ -0.1
PTPMT1-204ENST00000527079 RRP1P56182 461 aaKnown RBP14.4□□□□□ -0.1
PTPMT1-204ENST00000527079 MYOM2P54296 1465 aa14.4□□□□□ -0.1
PTPMT1-204ENST00000527079 RCAN3Q9UKA8 241 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms