RNA–Protein interactions for RNA: ENST00000526994.6

RAB3IP-208, Transcript of RAB3A interacting protein, humanhuman

TSL 3

Gene RAB3IP, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-208ENST00000526994 OSBPP22059 807 aa11.78□□□□□ -0.52
RAB3IP-208ENST00000526994 PTPREP23469 700 aa11.78□□□□□ -0.52
RAB3IP-208ENST00000526994 MAP3K7O43318 606 aa11.77□□□□□ -0.53
RAB3IP-208ENST00000526994 EN1Q05925 392 aaPredicted RBP11.77□□□□□ -0.53
RAB3IP-208ENST00000526994 DMRTA1Q5VZB9 504 aa11.77□□□□□ -0.53
RAB3IP-208ENST00000526994 KCNH8Q96L42 1107 aa11.77□□□□□ -0.53
RAB3IP-208ENST00000526994 LSM11P83369 360 aaKnown RBP eCLIP11.76□□□□□ -0.53
RAB3IP-208ENST00000526994 ANKRD13DQ6ZTN6 518 aa11.76□□□□□ -0.53
RAB3IP-208ENST00000526994 TESPA1A2RU30 521 aaPredicted RBP11.75□□□□□ -0.53
RAB3IP-208ENST00000526994 TSR1Q2NL82 804 aaKnown RBP11.75□□□□□ -0.53
RAB3IP-208ENST00000526994 C6orf132Q5T0Z8 1188 aa11.74□□□□□ -0.53
RAB3IP-208ENST00000526994 COL9A1P20849 921 aa11.72□□□□□ -0.53
RAB3IP-208ENST00000526994 CDHR5Q9HBB8 845 aa11.71□□□□□ -0.53
RAB3IP-208ENST00000526994 PPP1R3GB7ZBB8 358 aa11.7□□□□□ -0.54
RAB3IP-208ENST00000526994 ADGRD1Q6QNK2 874 aa11.67□□□□□ -0.54
RAB3IP-208ENST00000526994 RBM26Q5T8P6 1007 aaKnown RBP11.66□□□□□ -0.54
RAB3IP-208ENST00000526994 SMYD5Q6GMV2 418 aa11.66□□□□□ -0.54
RAB3IP-208ENST00000526994 ZBED2Q9BTP6 218 aa11.66□□□□□ -0.54
RAB3IP-208ENST00000526994 PROX2Q3B8N5 592 aa11.65□□□□□ -0.54
RAB3IP-208ENST00000526994 SPNS2Q8IVW8 549 aa11.65□□□□□ -0.54
RAB3IP-208ENST00000526994 VPS9D1Q9Y2B5 631 aa11.64□□□□□ -0.55
RAB3IP-208ENST00000526994 NUTM2FA1L443 756 aa11.63□□□□□ -0.55
RAB3IP-208ENST00000526994 TK2O00142 265 aa11.63□□□□□ -0.55
RAB3IP-208ENST00000526994 SLC4A5Q9BY07 1137 aa11.6□□□□□ -0.55
RAB3IP-208ENST00000526994 NPDC1Q9NQX5 325 aaPredicted RBP11.59□□□□□ -0.55
RAB3IP-208ENST00000526994 TULP1O00294 542 aaPredicted RBP11.58□□□□□ -0.56
RAB3IP-208ENST00000526994 HRO43593 1189 aa11.58□□□□□ -0.56
RAB3IP-208ENST00000526994 TRIM6-TRIM34B2RNG4 842 aa11.57□□□□□ -0.56
RAB3IP-208ENST00000526994 CERKQ8TCT0 537 aa11.57□□□□□ -0.56
RAB3IP-208ENST00000526994 CDCA7LQ96GN5 454 aa11.57□□□□□ -0.56
RAB3IP-208ENST00000526994 PRSS12P56730 875 aa11.56□□□□□ -0.56
RAB3IP-208ENST00000526994 PTGDRQ13258 359 aa11.56□□□□□ -0.56
RAB3IP-208ENST00000526994 TSKSQ9UJT2 592 aa11.56□□□□□ -0.56
RAB3IP-208ENST00000526994 STAC3Q96MF2 364 aa11.55□□□□□ -0.56
RAB3IP-208ENST00000526994 KIAA1468Q9P260 1216 aa11.55□□□□□ -0.56
RAB3IP-208ENST00000526994 MMRN1Q13201 1228 aa11.54□□□□□ -0.56
RAB3IP-208ENST00000526994 PADI6Q6TGC4 694 aa11.54□□□□□ -0.56
RAB3IP-208ENST00000526994 GPIHBP1Q8IV16 184 aa11.54□□□□□ -0.56
RAB3IP-208ENST00000526994 FAM198AQ9UFP1 575 aa11.54□□□□□ -0.56
RAB3IP-208ENST00000526994 RABGEF1Q9UJ41 708 aa11.54□□□□□ -0.56
RAB3IP-208ENST00000526994 MYT1LQ9UL68 1186 aa11.54□□□□□ -0.56
RAB3IP-208ENST00000526994 FCHSD2O94868 740 aa11.53□□□□□ -0.56
RAB3IP-208ENST00000526994 BHMG1C9JSJ3 638 aaPredicted RBP11.52□□□□□ -0.57
RAB3IP-208ENST00000526994 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.52□□□□□ -0.57
RAB3IP-208ENST00000526994 NBPF3Q9H094 633 aa11.52□□□□□ -0.57
RAB3IP-208ENST00000526994 LMOD2Q6P5Q4 547 aa11.51□□□□□ -0.57
RAB3IP-208ENST00000526994 SEPT9Q9UHD8 586 aaPredicted RBP11.51□□□□□ -0.57
RAB3IP-208ENST00000526994 GPR37O15354 613 aa11.5□□□□□ -0.57
RAB3IP-208ENST00000526994 ONECUT3O60422 494 aaPredicted RBP11.5□□□□□ -0.57
RAB3IP-208ENST00000526994 PACS2Q86VP3 889 aa11.5□□□□□ -0.57
RAB3IP-208ENST00000526994 MRPL50Q8N5N7 158 aaKnown RBP11.5□□□□□ -0.57
RAB3IP-208ENST00000526994 C3orf80F5H4A9 247 aa11.49□□□□□ -0.57
RAB3IP-208ENST00000526994 SMAPO00193 183 aa11.49□□□□□ -0.57
RAB3IP-208ENST00000526994 BCANQ96GW7 911 aa11.49□□□□□ -0.57
RAB3IP-208ENST00000526994 RBM27Q9P2N5 1060 aaKnown RBP11.49□□□□□ -0.57
RAB3IP-208ENST00000526994 RNF166Q96A37 237 aaPredicted RBP11.48□□□□□ -0.57
RAB3IP-208ENST00000526994 TTC13Q8NBP0 860 aa11.47□□□□□ -0.57
RAB3IP-208ENST00000526994 NBPF26B4DH59 902 aa11.46□□□□□ -0.57
RAB3IP-208ENST00000526994 PNMA3Q9UL41 463 aa11.46□□□□□ -0.57
RAB3IP-208ENST00000526994 GOLGA8CPA6NN73 597 aa11.45□□□□□ -0.58
RAB3IP-208ENST00000526994 FECHP22830 423 aa11.45□□□□□ -0.58
RAB3IP-208ENST00000526994 HIC1Q14526 733 aa11.45□□□□□ -0.58
RAB3IP-208ENST00000526994 NUDT18Q6ZVK8 323 aa11.45□□□□□ -0.58
RAB3IP-208ENST00000526994 TATDN2Q93075 761 aa11.45□□□□□ -0.58
RAB3IP-208ENST00000526994 FAM161AQ3B820 660 aa11.44□□□□□ -0.58
RAB3IP-208ENST00000526994 KCTD12Q96CX2 325 aaKnown RBP11.44□□□□□ -0.58
RAB3IP-208ENST00000526994 GNPATO15228 680 aa11.43□□□□□ -0.58
RAB3IP-208ENST00000526994 FAM98CQ17RN3 349 aaKnown RBP11.41□□□□□ -0.58
RAB3IP-208ENST00000526994 LAPTM4BQ86VI4 370 aa11.41□□□□□ -0.58
RAB3IP-208ENST00000526994 WNT2BQ93097 391 aa11.41□□□□□ -0.58
RAB3IP-208ENST00000526994 ZFRQ96KR1 1074 aaKnown RBP11.4□□□□□ -0.58
RAB3IP-208ENST00000526994 ADGRG1Q9Y653 693 aa11.4□□□□□ -0.58
RAB3IP-208ENST00000526994 ANKK1Q8NFD2 765 aa11.37□□□□□ -0.59
RAB3IP-208ENST00000526994 ZC3H15Q8WU90 426 aaKnown RBP11.36□□□□□ -0.59
RAB3IP-208ENST00000526994 EYA1Q99502 592 aa11.36□□□□□ -0.59
RAB3IP-208ENST00000526994 BCAMP50895 628 aa11.35□□□□□ -0.59
RAB3IP-208ENST00000526994 RBM46Q8TBY0 533 aaKnown RBP11.35□□□□□ -0.59
RAB3IP-208ENST00000526994 THSD4Q6ZMP0 1018 aa11.34□□□□□ -0.59
RAB3IP-208ENST00000526994 PTPN5P54829 565 aa11.33□□□□□ -0.6
RAB3IP-208ENST00000526994 SAMD7Q7Z3H4 446 aa11.33□□□□□ -0.6
RAB3IP-208ENST00000526994 LRCH3Q96II8 777 aa11.32□□□□□ -0.6
RAB3IP-208ENST00000526994 SOWAHBA6NEL2 793 aa11.31□□□□□ -0.6
RAB3IP-208ENST00000526994 MAP2K5Q13163 448 aa11.31□□□□□ -0.6
RAB3IP-208ENST00000526994 PXYLP1Q8TE99 480 aa11.31□□□□□ -0.6
RAB3IP-208ENST00000526994 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.31□□□□□ -0.6
RAB3IP-208ENST00000526994 RNF40O75150 1001 aa11.3□□□□□ -0.6
RAB3IP-208ENST00000526994 OATP04181 439 aa11.3□□□□□ -0.6
RAB3IP-208ENST00000526994 SWT1Q5T5J6 900 aaKnown RBP11.3□□□□□ -0.6
RAB3IP-208ENST00000526994 METTL3Q86U44 580 aaKnown RBP11.3□□□□□ -0.6
RAB3IP-208ENST00000526994 RCCD1A6NED2 376 aa11.29□□□□□ -0.6
RAB3IP-208ENST00000526994 ZMYND10O75800 440 aa11.29□□□□□ -0.6
RAB3IP-208ENST00000526994 DNAJB2P25686 324 aa11.29□□□□□ -0.6
RAB3IP-208ENST00000526994 NLRP7Q8WX94 980 aa11.29□□□□□ -0.6
RAB3IP-208ENST00000526994 HCSTQ9UBK5 93 aa11.28□□□□□ -0.6
RAB3IP-208ENST00000526994 HPS5Q9UPZ3 1129 aa11.28□□□□□ -0.6
RAB3IP-208ENST00000526994 IRF6O14896 467 aa11.27□□□□□ -0.61
RAB3IP-208ENST00000526994 BARGINQ6ZT62 677 aa11.27□□□□□ -0.61
RAB3IP-208ENST00000526994 KRI1Q8N9T8 703 aaKnown RBP11.27□□□□□ -0.61
RAB3IP-208ENST00000526994 CCDC102AQ96A19 550 aa11.27□□□□□ -0.61
RAB3IP-208ENST00000526994 HDGFP51858 240 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms