RNA–Protein interactions for RNA: ENST00000526468.1

CAPN1-204, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-204ENST00000526468 A2ML1A8K2U0 1454 aa18.82■□□□□ 0.6
CAPN1-204ENST00000526468 CROCC2H7BZ55 1655 aa18.81■□□□□ 0.6
CAPN1-204ENST00000526468 EIF2AK4Q9P2K8 1649 aaKnown RBP18.8■□□□□ 0.6
CAPN1-204ENST00000526468 NEURL4Q96JN8 1562 aa18.8■□□□□ 0.6
CAPN1-204ENST00000526468 MAST1Q9Y2H9 1570 aa18.79■□□□□ 0.6
CAPN1-204ENST00000526468 PZPP20742 1482 aa18.78■□□□□ 0.6
CAPN1-204ENST00000526468 NCKAP5LQ9HCH0 1330 aa18.77■□□□□ 0.6
CAPN1-204ENST00000526468 DISP3Q9P2K9 1392 aa18.77■□□□□ 0.6
CAPN1-204ENST00000526468 DHX29Q7Z478 1369 aaKnown RBP18.76■□□□□ 0.59
CAPN1-204ENST00000526468 VPS8Q8N3P4 1428 aa18.75■□□□□ 0.59
CAPN1-204ENST00000526468 LRRC9Q6ZRR7 1453 aa18.75■□□□□ 0.59
CAPN1-204ENST00000526468 ZNF335Q9H4Z2 1342 aaPredicted RBP18.74■□□□□ 0.59
CAPN1-204ENST00000526468 IQGAP1P46940 1657 aa18.74■□□□□ 0.59
CAPN1-204ENST00000526468 TNRQ92752 1358 aa18.73■□□□□ 0.59
CAPN1-204ENST00000526468 PPP6R1Q9UPN7 881 aa18.72■□□□□ 0.59
CAPN1-204ENST00000526468 MROH1Q8NDA8 1641 aa18.71■□□□□ 0.59
CAPN1-204ENST00000526468 ABCC3O15438 1527 aa18.71■□□□□ 0.59
CAPN1-204ENST00000526468 PKD2Q13563 968 aa18.71■□□□□ 0.59
CAPN1-204ENST00000526468 DEPDC5O75140 1603 aa18.71■□□□□ 0.58
CAPN1-204ENST00000526468 KIF3BO15066 747 aa18.7■□□□□ 0.58
CAPN1-204ENST00000526468 UGGT1Q9NYU2 1555 aa18.69■□□□□ 0.58
CAPN1-204ENST00000526468 NLRP1Q9C000 1473 aa18.68■□□□□ 0.58
CAPN1-204ENST00000526468 UBR1Q8IWV7 1749 aa18.68■□□□□ 0.58
CAPN1-204ENST00000526468 CPS1P31327 1500 aa18.67■□□□□ 0.58
CAPN1-204ENST00000526468 MAP3K1Q13233 1512 aa18.67■□□□□ 0.58
CAPN1-204ENST00000526468 STRCP1A6NGW2 1772 aa18.66■□□□□ 0.58
CAPN1-204ENST00000526468 VWDEQ8N2E2 1590 aa18.66■□□□□ 0.58
CAPN1-204ENST00000526468 SYNMO15061 1565 aa18.65■□□□□ 0.58
CAPN1-204ENST00000526468 MYOM3Q5VTT5 1437 aa18.65■□□□□ 0.58
CAPN1-204ENST00000526468 PTPN23Q9H3S7 1636 aa18.64■□□□□ 0.57
CAPN1-204ENST00000526468 RSPH4AQ5TD94 716 aa18.64■□□□□ 0.57
CAPN1-204ENST00000526468 WASHC2CQ9Y4E1 1318 aa18.64■□□□□ 0.57
CAPN1-204ENST00000526468 PRDM15P57071 1507 aaPredicted RBP18.64■□□□□ 0.57
CAPN1-204ENST00000526468 FBXO31Q5XUX0 539 aaPredicted RBP18.63■□□□□ 0.57
CAPN1-204ENST00000526468 DUOX2Q9NRD8 1548 aa18.63■□□□□ 0.57
CAPN1-204ENST00000526468 UBAP1LF5GYI3 381 aa18.62■□□□□ 0.57
CAPN1-204ENST00000526468 ERVK-7P63135 1459 aa18.62■□□□□ 0.57
CAPN1-204ENST00000526468 SHANK2Q9UPX8 1470 aa18.6■□□□□ 0.57
CAPN1-204ENST00000526468 MIA2Q96PC5 1412 aa18.6■□□□□ 0.57
CAPN1-204ENST00000526468 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.6■□□□□ 0.57
CAPN1-204ENST00000526468 TSPY4P0CV99 314 aa18.6■□□□□ 0.57
CAPN1-204ENST00000526468 TSPY10P0CW01 314 aa18.6■□□□□ 0.57
CAPN1-204ENST00000526468 ILDR2Q71H61 639 aa18.59■□□□□ 0.57
CAPN1-204ENST00000526468 NPHP4O75161 1426 aaPredicted RBP18.58■□□□□ 0.57
CAPN1-204ENST00000526468 MED14O60244 1454 aa18.58■□□□□ 0.56
CAPN1-204ENST00000526468 MED1Q15648 1581 aaPredicted RBP18.57■□□□□ 0.56
CAPN1-204ENST00000526468 XIRP1Q702N8 1843 aaKnown RBP18.56■□□□□ 0.56
CAPN1-204ENST00000526468 PIK3C2BO00750 1634 aa18.56■□□□□ 0.56
CAPN1-204ENST00000526468 SCAF1Q9H7N4 1312 aaKnown RBP18.54■□□□□ 0.56
CAPN1-204ENST00000526468 ERBINQ96RT1 1412 aa18.53■□□□□ 0.56
CAPN1-204ENST00000526468 ALKQ9UM73 1620 aa18.52■□□□□ 0.56
CAPN1-204ENST00000526468 LOC105371045A0A1W2PR82 267 aa18.52■□□□□ 0.56
CAPN1-204ENST00000526468 KANK4Q5T7N3 995 aaPredicted RBP18.52■□□□□ 0.56
CAPN1-204ENST00000526468 ANKLE2Q86XL3 938 aa18.52■□□□□ 0.56
CAPN1-204ENST00000526468 KDM5AP29375 1690 aaKnown RBP18.52■□□□□ 0.56
CAPN1-204ENST00000526468 KIF15Q9NS87 1388 aa18.52■□□□□ 0.55
CAPN1-204ENST00000526468 MYO5BQ9ULV0 1848 aa18.51■□□□□ 0.55
CAPN1-204ENST00000526468 THEMISQ8N1K5 641 aaPredicted RBP18.51■□□□□ 0.55
CAPN1-204ENST00000526468 SOCS7O14512 581 aa18.5■□□□□ 0.55
CAPN1-204ENST00000526468 SCAF11Q99590 1463 aaKnown RBP18.49■□□□□ 0.55
CAPN1-204ENST00000526468 DAPK1P53355 1430 aa18.49■□□□□ 0.55
CAPN1-204ENST00000526468 PIP4K2BP78356 416 aa18.48■□□□□ 0.55
CAPN1-204ENST00000526468 ABCC5O15440 1437 aa18.48■□□□□ 0.55
CAPN1-204ENST00000526468 SLIT1O75093 1534 aa18.47■□□□□ 0.55
CAPN1-204ENST00000526468 FGD6Q6ZV73 1430 aa18.47■□□□□ 0.55
CAPN1-204ENST00000526468 EFCAB6Q5THR3 1501 aa18.45■□□□□ 0.54
CAPN1-204ENST00000526468 LRRC7Q96NW7 1537 aa18.45■□□□□ 0.54
CAPN1-204ENST00000526468 GCC2Q8IWJ2 1684 aa18.44■□□□□ 0.54
CAPN1-204ENST00000526468 ARHGAP31Q2M1Z3 1444 aa18.44■□□□□ 0.54
CAPN1-204ENST00000526468 TOM1O60784 492 aa18.44■□□□□ 0.54
CAPN1-204ENST00000526468 ARHGAP23Q9P227 1491 aa18.44■□□□□ 0.54
CAPN1-204ENST00000526468 HSPA1LP34931 641 aa18.42■□□□□ 0.54
CAPN1-204ENST00000526468 APLP2Q06481 763 aa18.42■□□□□ 0.54
CAPN1-204ENST00000526468 ADGRB3O60242 1522 aa18.42■□□□□ 0.54
CAPN1-204ENST00000526468 LMTK2Q8IWU2 1503 aa18.41■□□□□ 0.54
CAPN1-204ENST00000526468 KANK1Q14678 1352 aa18.41■□□□□ 0.54
CAPN1-204ENST00000526468 TET3O43151 1660 aa18.4■□□□□ 0.54
CAPN1-204ENST00000526468 RRP7BPQ9NSQ0 103 aa18.38■□□□□ 0.53
CAPN1-204ENST00000526468 ANKRD30AQ9BXX3 1397 aa18.37■□□□□ 0.53
CAPN1-204ENST00000526468 ADGRL2O95490 1459 aa18.36■□□□□ 0.53
CAPN1-204ENST00000526468 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.36■□□□□ 0.532e-6■■■□□ 14.7
CAPN1-204ENST00000526468 UNC13BO14795 1591 aa18.34■□□□□ 0.53
CAPN1-204ENST00000526468 NWD1Q149M9 1564 aa18.34■□□□□ 0.53
CAPN1-204ENST00000526468 SENP3Q9H4L4 574 aaPredicted RBP18.33■□□□□ 0.52
CAPN1-204ENST00000526468 TMEM2Q9UHN6 1383 aa18.32■□□□□ 0.52
CAPN1-204ENST00000526468 ROBO1Q9Y6N7 1651 aa18.32■□□□□ 0.52
CAPN1-204ENST00000526468 CHD2O14647 1828 aaKnown RBP18.31■□□□□ 0.52
CAPN1-204ENST00000526468 CHIC2Q9UKJ5 165 aa18.31■□□□□ 0.52
CAPN1-204ENST00000526468 E9PCH4 1651 aa18.31■□□□□ 0.52
CAPN1-204ENST00000526468 LTKP29376 864 aa18.3■□□□□ 0.52
CAPN1-204ENST00000526468 TXNDC2Q86VQ3 553 aa18.3■□□□□ 0.52
CAPN1-204ENST00000526468 STAG3Q9UJ98 1225 aa18.3■□□□□ 0.52
CAPN1-204ENST00000526468 EID1Q9Y6B2 187 aa18.3■□□□□ 0.52
CAPN1-204ENST00000526468 PHF23Q9BUL5 403 aaPredicted RBP18.29■□□□□ 0.52
CAPN1-204ENST00000526468 RPRD2Q5VT52 1461 aaKnown RBP18.28■□□□□ 0.52
CAPN1-204ENST00000526468 NOS1P29475 1434 aa18.28■□□□□ 0.52
CAPN1-204ENST00000526468 TMEM131LA2VDJ0 1609 aa18.27■□□□□ 0.52
CAPN1-204ENST00000526468 NKTRP30414 1462 aaKnown RBP18.27■□□□□ 0.52
CAPN1-204ENST00000526468 IQGAP3Q86VI3 1631 aa18.27■□□□□ 0.51
CAPN1-204ENST00000526468 PHLPP1O60346 1717 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms