RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 PHF14O94880 888 aa9.44□□□□□ -0.9
ECHDC1-219ENST00000526299 ANKK1Q8NFD2 765 aa9.44□□□□□ -0.9
ECHDC1-219ENST00000526299 BCAMP50895 628 aa9.43□□□□□ -0.9
ECHDC1-219ENST00000526299 FBXW7Q969H0 707 aa9.43□□□□□ -0.9
ECHDC1-219ENST00000526299 IRX2Q9BZI1 471 aaPredicted RBP9.42□□□□□ -0.9
ECHDC1-219ENST00000526299 KIAA1468Q9P260 1216 aa9.41□□□□□ -0.9
ECHDC1-219ENST00000526299 DPYSL4O14531 572 aa9.39□□□□□ -0.91
ECHDC1-219ENST00000526299 C6orf132Q5T0Z8 1188 aa9.39□□□□□ -0.91
ECHDC1-219ENST00000526299 LAPTM4BQ86VI4 370 aa9.39□□□□□ -0.91
ECHDC1-219ENST00000526299 SEPT9Q9UHD8 586 aaPredicted RBP9.39□□□□□ -0.91
ECHDC1-219ENST00000526299 SOWAHBA6NEL2 793 aa9.38□□□□□ -0.91
ECHDC1-219ENST00000526299 CAMK2BQ13554 666 aa9.38□□□□□ -0.91
ECHDC1-219ENST00000526299 ZFRQ96KR1 1074 aaKnown RBP9.38□□□□□ -0.91
ECHDC1-219ENST00000526299 ITGBL1O95965 494 aaPredicted RBP9.37□□□□□ -0.91
ECHDC1-219ENST00000526299 RBM33Q96EV2 1170 aaKnown RBP9.37□□□□□ -0.91
ECHDC1-219ENST00000526299 EPAS1Q99814 870 aa9.37□□□□□ -0.91
ECHDC1-219ENST00000526299 WBP1LQ9NX94 342 aa9.36□□□□□ -0.91
ECHDC1-219ENST00000526299 ONECUT3O60422 494 aaPredicted RBP9.35□□□□□ -0.91
ECHDC1-219ENST00000526299 DDX12PQ92771 950 aa9.35□□□□□ -0.91
ECHDC1-219ENST00000526299 TRIM6-TRIM34B2RNG4 842 aa9.34□□□□□ -0.91
ECHDC1-219ENST00000526299 NYAP1Q6ZVC0 841 aa9.31□□□□□ -0.92
ECHDC1-219ENST00000526299 KCNC4Q03721 635 aa9.3□□□□□ -0.92
ECHDC1-219ENST00000526299 FAM98CQ17RN3 349 aaKnown RBP9.3□□□□□ -0.92
ECHDC1-219ENST00000526299 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.29□□□□□ -0.92
ECHDC1-219ENST00000526299 HPS5Q9UPZ3 1129 aa9.29□□□□□ -0.92
ECHDC1-219ENST00000526299 TSR1Q2NL82 804 aaKnown RBP9.28□□□□□ -0.92
ECHDC1-219ENST00000526299 NBR1Q14596 966 aa9.27□□□□□ -0.93
ECHDC1-219ENST00000526299 LRCH3Q96II8 777 aa9.27□□□□□ -0.93
ECHDC1-219ENST00000526299 TSR3Q9UJK0 312 aaKnown RBP9.27□□□□□ -0.93
ECHDC1-219ENST00000526299 TSKSQ9UJT2 592 aa9.27□□□□□ -0.93
ECHDC1-219ENST00000526299 MAP3K7O43318 606 aa9.26□□□□□ -0.93
ECHDC1-219ENST00000526299 EN1Q05925 392 aaPredicted RBP9.26□□□□□ -0.93
ECHDC1-219ENST00000526299 PDIA6Q15084 440 aa9.24□□□□□ -0.93
ECHDC1-219ENST00000526299 PACS2Q86VP3 889 aa9.24□□□□□ -0.93
ECHDC1-219ENST00000526299 Q6ZNB5 142 aa9.23□□□□□ -0.93
ECHDC1-219ENST00000526299 SMAPO00193 183 aa9.22□□□□□ -0.93
ECHDC1-219ENST00000526299 BBXQ8WY36 941 aaPredicted RBP9.21□□□□□ -0.94
ECHDC1-219ENST00000526299 FAM198AQ9UFP1 575 aa9.21□□□□□ -0.94
ECHDC1-219ENST00000526299 PRIM1P49642 420 aaKnown RBP9.2□□□□□ -0.94
ECHDC1-219ENST00000526299 PPP4CP60510 307 aa9.2□□□□□ -0.94
ECHDC1-219ENST00000526299 CDCA7LQ96GN5 454 aa9.2□□□□□ -0.94
ECHDC1-219ENST00000526299 C3orf80F5H4A9 247 aa9.19□□□□□ -0.94
ECHDC1-219ENST00000526299 SPDYE16A6NNV3 312 aaPredicted RBP9.18□□□□□ -0.94
ECHDC1-219ENST00000526299 PRSS12P56730 875 aa9.18□□□□□ -0.94
ECHDC1-219ENST00000526299 SAMD7Q7Z3H4 446 aa9.18□□□□□ -0.94
ECHDC1-219ENST00000526299 GRXCR2A6NFK2 248 aa9.16□□□□□ -0.94
ECHDC1-219ENST00000526299 TJAP1Q5JTD0 557 aa9.16□□□□□ -0.94
ECHDC1-219ENST00000526299 PNMA3Q9UL41 463 aa9.15□□□□□ -0.94
ECHDC1-219ENST00000526299 E2F4Q16254 413 aa9.14□□□□□ -0.95
ECHDC1-219ENST00000526299 TATDN2Q93075 761 aa9.14□□□□□ -0.95
ECHDC1-219ENST00000526299 SPRYD3Q8NCJ5 442 aa9.13□□□□□ -0.95
ECHDC1-219ENST00000526299 MTRQ99707 1265 aa9.13□□□□□ -0.95
ECHDC1-219ENST00000526299 CDHR5Q9HBB8 845 aa9.13□□□□□ -0.95
ECHDC1-219ENST00000526299 NBPF26B4DH59 902 aa9.12□□□□□ -0.95
ECHDC1-219ENST00000526299 LCE2BO14633 110 aa9.12□□□□□ -0.95
ECHDC1-219ENST00000526299 GFRA3O60609 400 aa9.12□□□□□ -0.95
ECHDC1-219ENST00000526299 CERKQ8TCT0 537 aa9.12□□□□□ -0.95
ECHDC1-219ENST00000526299 RNF40O75150 1001 aa9.1□□□□□ -0.95
ECHDC1-219ENST00000526299 NUDT18Q6ZVK8 323 aa9.1□□□□□ -0.95
ECHDC1-219ENST00000526299 ZNF516Q92618 1163 aa9.1□□□□□ -0.95
ECHDC1-219ENST00000526299 PRKD2Q9BZL6 878 aa9.1□□□□□ -0.95
ECHDC1-219ENST00000526299 IL21Q9HBE4 155 aa9.1□□□□□ -0.95
ECHDC1-219ENST00000526299 OSBPP22059 807 aa9.09□□□□□ -0.95
ECHDC1-219ENST00000526299 LAPTM4AQ15012 233 aa9.09□□□□□ -0.95
ECHDC1-219ENST00000526299 PPP1R18Q6NYC8 613 aa9.09□□□□□ -0.95
ECHDC1-219ENST00000526299 ARIH1Q9Y4X5 557 aaPredicted RBP9.09□□□□□ -0.95
ECHDC1-219ENST00000526299 APLP1P51693 650 aa9.07□□□□□ -0.96
ECHDC1-219ENST00000526299 WDR70Q9NW82 654 aa9.07□□□□□ -0.96
ECHDC1-219ENST00000526299 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.07□□□□□ -0.96
ECHDC1-219ENST00000526299 TRAF7Q6Q0C0 670 aa9.06□□□□□ -0.96
ECHDC1-219ENST00000526299 HDGFP51858 240 aaKnown RBP9.05□□□□□ -0.96
ECHDC1-219ENST00000526299 NKX2-3Q8TAU0 364 aa9.05□□□□□ -0.96
ECHDC1-219ENST00000526299 CFAP44Q96MT7 982 aa9.05□□□□□ -0.96
ECHDC1-219ENST00000526299 PAXIP1Q6ZW49 1069 aaPredicted RBP9.04□□□□□ -0.96
ECHDC1-219ENST00000526299 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.04□□□□□ -0.96
ECHDC1-219ENST00000526299 RBM27Q9P2N5 1060 aaKnown RBP9.04□□□□□ -0.96
ECHDC1-219ENST00000526299 SWT1Q5T5J6 900 aaKnown RBP9.03□□□□□ -0.96
ECHDC1-219ENST00000526299 PADI6Q6TGC4 694 aa9.03□□□□□ -0.96
ECHDC1-219ENST00000526299 NPDC1Q9NQX5 325 aaPredicted RBP9.03□□□□□ -0.96
ECHDC1-219ENST00000526299 NRG2O14511 850 aaPredicted RBP9.02□□□□□ -0.97
ECHDC1-219ENST00000526299 TTC13Q8NBP0 860 aa9.02□□□□□ -0.97
ECHDC1-219ENST00000526299 V9GY48 417 aaPredicted RBP9.02□□□□□ -0.97
ECHDC1-219ENST00000526299 COPS2P61201 443 aa9.01□□□□□ -0.97
ECHDC1-219ENST00000526299 SLF2Q8IX21 1173 aa8.98□□□□□ -0.97
ECHDC1-219ENST00000526299 NECTIN2Q92692 538 aa8.96□□□□□ -0.98
ECHDC1-219ENST00000526299 EYA1Q99502 592 aa8.96□□□□□ -0.98
ECHDC1-219ENST00000526299 PDZRN3Q9UPQ7 1066 aa8.95□□□□□ -0.98
ECHDC1-219ENST00000526299 ZPR1O75312 459 aa8.94□□□□□ -0.98
ECHDC1-219ENST00000526299 GGCXP38435 758 aa8.94□□□□□ -0.98
ECHDC1-219ENST00000526299 MLLT3P42568 568 aaPredicted RBP8.92□□□□□ -0.98
ECHDC1-219ENST00000526299 PCDHB3Q9Y5E6 796 aa8.92□□□□□ -0.98
ECHDC1-219ENST00000526299 TMUB1Q9BVT8 246 aa8.91□□□□□ -0.98
ECHDC1-219ENST00000526299 SLC4A3P48751 1232 aa8.9□□□□□ -0.98
ECHDC1-219ENST00000526299 BLOC1S3Q6QNY0 202 aa8.9□□□□□ -0.98
ECHDC1-219ENST00000526299 ZNF787Q6DD87 383 aa8.89□□□□□ -0.99
ECHDC1-219ENST00000526299 RNF223E7ERA6 249 aa8.88□□□□□ -0.99
ECHDC1-219ENST00000526299 TLL1O43897 1013 aa8.88□□□□□ -0.99
ECHDC1-219ENST00000526299 EMID1Q96A84 441 aaPredicted RBP8.88□□□□□ -0.99
ECHDC1-219ENST00000526299 PRR14Q9BWN1 585 aa8.88□□□□□ -0.99
ECHDC1-219ENST00000526299 DNAJB2P25686 324 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms