RNA–Protein interactions for RNA: ENST00000526258.5

KDM2A-207, Transcript of lysine demethylase 2A, humanhuman

TSL 1 (best)

Gene KDM2A, Length 5,671 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-207ENST00000526258 PLIN1O60240 522 aa15.99■□□□□ 0.15
KDM2A-207ENST00000526258 RRP12Q5JTH9 1297 aaKnown RBP15.98■□□□□ 0.15
KDM2A-207ENST00000526258 H0YHG0 523 aa15.98■□□□□ 0.15
KDM2A-207ENST00000526258 HOMER1Q86YM7 354 aa15.98■□□□□ 0.15
KDM2A-207ENST00000526258 BAZ1BQ9UIG0 1483 aaKnown RBP15.98■□□□□ 0.15
KDM2A-207ENST00000526258 TMF1P82094 1093 aa15.98■□□□□ 0.15
KDM2A-207ENST00000526258 SETD5Q9C0A6 1442 aa15.98■□□□□ 0.15
KDM2A-207ENST00000526258 HSP90B2PQ58FF3 399 aa15.97■□□□□ 0.15
KDM2A-207ENST00000526258 CCDC70Q6NSX1 233 aa15.97■□□□□ 0.15
KDM2A-207ENST00000526258 ATP6V1DQ9Y5K8 247 aa15.97■□□□□ 0.15
KDM2A-207ENST00000526258 MNS1Q8NEH6 495 aa15.97■□□□□ 0.15
KDM2A-207ENST00000526258 CEP89Q96ST8 783 aa15.97■□□□□ 0.15
KDM2A-207ENST00000526258 RSF1Q96T23 1441 aaPredicted RBP15.97■□□□□ 0.15
KDM2A-207ENST00000526258 ZHX1Q9UKY1 873 aaPredicted RBP15.96■□□□□ 0.15
KDM2A-207ENST00000526258 FOXD4L6Q3SYB3 417 aaPredicted RBP15.96■□□□□ 0.15
KDM2A-207ENST00000526258 FOXD4L3Q6VB84 417 aaPredicted RBP15.96■□□□□ 0.15
KDM2A-207ENST00000526258 ACBD3Q9H3P7 528 aa15.96■□□□□ 0.15
KDM2A-207ENST00000526258 CLUAP1Q96AJ1 413 aa15.95■□□□□ 0.14
KDM2A-207ENST00000526258 TRIM6-TRIM34B2RNG4 842 aa15.95■□□□□ 0.14
KDM2A-207ENST00000526258 GRPEL1Q9HAV7 217 aa15.95■□□□□ 0.14
KDM2A-207ENST00000526258 RASSF8Q8NHQ8 419 aa15.95■□□□□ 0.14
KDM2A-207ENST00000526258 PES1O00541 588 aaKnown RBP15.94■□□□□ 0.14
KDM2A-207ENST00000526258 NPHP1O15259 732 aa15.94■□□□□ 0.14
KDM2A-207ENST00000526258 TSPYL1Q9H0U9 437 aa15.94■□□□□ 0.14
KDM2A-207ENST00000526258 DEF6Q9H4E7 631 aa15.94■□□□□ 0.14
KDM2A-207ENST00000526258 CENPJQ9HC77 1338 aaPredicted RBP15.94■□□□□ 0.14
KDM2A-207ENST00000526258 SF3A1Q15459 793 aaKnown RBP15.94■□□□□ 0.14
KDM2A-207ENST00000526258 LEKR1Q6ZMV7 388 aa15.94■□□□□ 0.14
KDM2A-207ENST00000526258 HAP1P54257 671 aaPredicted RBP15.94■□□□□ 0.14
KDM2A-207ENST00000526258 MCTP1Q6DN14 999 aa15.93■□□□□ 0.14
KDM2A-207ENST00000526258 NUCB2P80303 420 aa15.93■□□□□ 0.14
KDM2A-207ENST00000526258 BCL11BQ9C0K0 894 aaPredicted RBP15.93■□□□□ 0.14
KDM2A-207ENST00000526258 TSR1Q2NL82 804 aaKnown RBP15.92■□□□□ 0.14
KDM2A-207ENST00000526258 CGNQ9P2M7 1197 aaKnown RBP15.92■□□□□ 0.14
KDM2A-207ENST00000526258 HSP90AB3PQ58FF7 597 aa15.92■□□□□ 0.14
KDM2A-207ENST00000526258 NLRP13Q86W25 1043 aa15.92■□□□□ 0.14
KDM2A-207ENST00000526258 RNF214Q8ND24 703 aa15.91■□□□□ 0.14
KDM2A-207ENST00000526258 NPM1P06748 294 aaKnown RBP eCLIP15.91■□□□□ 0.14
KDM2A-207ENST00000526258 MORC1Q86VD1 984 aa15.91■□□□□ 0.14
KDM2A-207ENST00000526258 PRKRIP1Q9H875 184 aaPredicted RBP15.9■□□□□ 0.14
KDM2A-207ENST00000526258 TPD52L1Q16890 204 aaPredicted RBP15.89■□□□□ 0.13
KDM2A-207ENST00000526258 AK7Q96M32 723 aa15.89■□□□□ 0.13
KDM2A-207ENST00000526258 POGKQ9P215 609 aa15.89■□□□□ 0.13
KDM2A-207ENST00000526258 ERICH4A6NGS2 130 aa15.89■□□□□ 0.13
KDM2A-207ENST00000526258 SMC4Q9NTJ3 1288 aa15.89■□□□□ 0.13
KDM2A-207ENST00000526258 TPM1P09493 284 aa15.88■□□□□ 0.13
KDM2A-207ENST00000526258 CGNL1Q0VF96 1302 aa15.88■□□□□ 0.13
KDM2A-207ENST00000526258 CBX1P83916 185 aa15.88■□□□□ 0.13
KDM2A-207ENST00000526258 RAB3GAP2Q9H2M9 1393 aa15.88■□□□□ 0.13
KDM2A-207ENST00000526258 ZSCAN30Q86W11 494 aa15.88■□□□□ 0.13
KDM2A-207ENST00000526258 CEP164Q9UPV0 1460 aa15.88■□□□□ 0.13
KDM2A-207ENST00000526258 PDCL2Q8N4E4 241 aa15.87■□□□□ 0.13
KDM2A-207ENST00000526258 CCDC191Q8NCU4 936 aa15.87■□□□□ 0.13
KDM2A-207ENST00000526258 KIF3AQ9Y496 699 aa15.87■□□□□ 0.13
KDM2A-207ENST00000526258 PHLDB1Q86UU1 1377 aa15.87■□□□□ 0.13
KDM2A-207ENST00000526258 CAVIN1Q6NZI2 390 aaKnown RBP15.87■□□□□ 0.13
KDM2A-207ENST00000526258 C22orf23Q9BZE7 217 aa15.86■□□□□ 0.13
KDM2A-207ENST00000526258 USP8P40818 1118 aa15.86■□□□□ 0.13
KDM2A-207ENST00000526258 BACH2Q9BYV9 841 aa15.86■□□□□ 0.13
KDM2A-207ENST00000526258 RUFY1Q96T51 708 aa15.85■□□□□ 0.13
KDM2A-207ENST00000526258 DCAF11Q8TEB1 546 aa15.85■□□□□ 0.13
KDM2A-207ENST00000526258 LMOD2Q6P5Q4 547 aa15.84■□□□□ 0.13
KDM2A-207ENST00000526258 H3BQV1 296 aa15.84■□□□□ 0.13
KDM2A-207ENST00000526258 IFFO2Q5TF58 517 aa15.84■□□□□ 0.13
KDM2A-207ENST00000526258 CALCOCO1Q9P1Z2 691 aa15.84■□□□□ 0.13
KDM2A-207ENST00000526258 RTF1Q92541 710 aaKnown RBP15.83■□□□□ 0.13
KDM2A-207ENST00000526258 FBXO3Q9UK99 471 aa15.83■□□□□ 0.13
KDM2A-207ENST00000526258 HMMRO75330 724 aa15.83■□□□□ 0.12
KDM2A-207ENST00000526258 PLCD4Q9BRC7 762 aa15.82■□□□□ 0.12
KDM2A-207ENST00000526258 IPO7O95373 1038 aaKnown RBP15.82■□□□□ 0.12
KDM2A-207ENST00000526258 PDIA4P13667 645 aaKnown RBP15.82■□□□□ 0.12
KDM2A-207ENST00000526258 U2AF1L5P0DN76 240 aaPredicted RBP15.82■□□□□ 0.12
KDM2A-207ENST00000526258 U2AF1Q01081 240 aaKnown RBP eCLIP15.82■□□□□ 0.12
KDM2A-207ENST00000526258 GPATCH3Q96I76 525 aa15.82■□□□□ 0.12
KDM2A-207ENST00000526258 CCDC112Q8NEF3 446 aa15.81■□□□□ 0.12
KDM2A-207ENST00000526258 CDR1P51861 262 aa15.81■□□□□ 0.12
KDM2A-207ENST00000526258 COG6Q9Y2V7 657 aa15.81■□□□□ 0.12
KDM2A-207ENST00000526258 CHMP3Q9Y3E7 222 aa15.81■□□□□ 0.12
KDM2A-207ENST00000526258 SOX12O15370 315 aa15.81■□□□□ 0.12
KDM2A-207ENST00000526258 ERCC4Q92889 916 aaPredicted RBP15.81■□□□□ 0.12
KDM2A-207ENST00000526258 DHX57Q6P158 1386 aaKnown RBP15.8■□□□□ 0.12
KDM2A-207ENST00000526258 MYBBP1AQ9BQG0 1328 aaKnown RBP15.8■□□□□ 0.12
KDM2A-207ENST00000526258 MBD3O95983 291 aa15.8■□□□□ 0.12
KDM2A-207ENST00000526258 TSPY26PQ9H489 355 aa15.8■□□□□ 0.12
KDM2A-207ENST00000526258 IRX3P78415 501 aaPredicted RBP15.8■□□□□ 0.12
KDM2A-207ENST00000526258 ANKRD45Q5TZF3 282 aa15.79■□□□□ 0.12
KDM2A-207ENST00000526258 SASS6Q6UVJ0 657 aa15.79■□□□□ 0.12
KDM2A-207ENST00000526258 E9PSI1 815 aa15.79■□□□□ 0.12
KDM2A-207ENST00000526258 FAM184AQ8NB25 1140 aa15.79■□□□□ 0.12
KDM2A-207ENST00000526258 CHMP4AQ9BY43 222 aa15.79■□□□□ 0.12
KDM2A-207ENST00000526258 CCDC146Q8IYE0 955 aa15.78■□□□□ 0.12
KDM2A-207ENST00000526258 ROCK2O75116 1388 aaKnown RBP15.78■□□□□ 0.12
KDM2A-207ENST00000526258 MCM4P33991 863 aa15.77■□□□□ 0.12
KDM2A-207ENST00000526258 CFDP1Q9UEE9 299 aaPredicted RBP15.77■□□□□ 0.12
KDM2A-207ENST00000526258 GPATCH11Q8N954 259 aa15.77■□□□□ 0.12
KDM2A-207ENST00000526258 DCTN1Q14203 1278 aa15.77■□□□□ 0.11
KDM2A-207ENST00000526258 GORABQ5T7V8 394 aa15.77■□□□□ 0.11
KDM2A-207ENST00000526258 VPS8Q8N3P4 1428 aa15.77■□□□□ 0.11
KDM2A-207ENST00000526258 GIMAP7Q8NHV1 300 aa15.77■□□□□ 0.11
KDM2A-207ENST00000526258 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms