RNA–Protein interactions for RNA: ENST00000525950.5

BDNF-213, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-213ENST00000525950 C9orf84Q5VXU9 1444 aa10.66□□□□□ -0.7
BDNF-213ENST00000525950 NUP155O75694 1391 aa10.65□□□□□ -0.7
BDNF-213ENST00000525950 GPRASP1Q5JY77 1395 aa10.65□□□□□ -0.7
BDNF-213ENST00000525950 PLEKHH2Q8IVE3 1493 aa10.65□□□□□ -0.7
BDNF-213ENST00000525950 MAGI1Q96QZ7 1491 aaPredicted RBP10.65□□□□□ -0.7
BDNF-213ENST00000525950 ARID3CA6NKF2 412 aa10.65□□□□□ -0.71
BDNF-213ENST00000525950 ZNF608Q9ULD9 1512 aaPredicted RBP10.65□□□□□ -0.71
BDNF-213ENST00000525950 ST20-MTHFSA0A0A6YYL1 179 aa10.64□□□□□ -0.71
BDNF-213ENST00000525950 BACH2Q9BYV9 841 aa10.64□□□□□ -0.71
BDNF-213ENST00000525950 TRPM1Q7Z4N2 1603 aa10.64□□□□□ -0.71
BDNF-213ENST00000525950 NBR1Q14596 966 aa10.64□□□□□ -0.71
BDNF-213ENST00000525950 BLMP54132 1417 aaPredicted RBP10.63□□□□□ -0.71
BDNF-213ENST00000525950 CARMIL2Q6F5E8 1435 aa10.63□□□□□ -0.71
BDNF-213ENST00000525950 PLB1Q6P1J6 1458 aa10.63□□□□□ -0.71
BDNF-213ENST00000525950 PDE4AP27815 886 aa10.63□□□□□ -0.71
BDNF-213ENST00000525950 EIF4G3O43432 1585 aaKnown RBP10.63□□□□□ -0.71
BDNF-213ENST00000525950 ABCA8O94911 1581 aa10.63□□□□□ -0.71
BDNF-213ENST00000525950 PRAG1Q86YV5 1406 aa10.62□□□□□ -0.71
BDNF-213ENST00000525950 EXOC6Q8TAG9 804 aa10.62□□□□□ -0.71
BDNF-213ENST00000525950 PER1O15534 1290 aaPredicted RBP10.62□□□□□ -0.71
BDNF-213ENST00000525950 ZNF326Q5BKZ1 582 aaKnown RBP10.62□□□□□ -0.71
BDNF-213ENST00000525950 POLR3GLQ9BT43 218 aa10.62□□□□□ -0.71
BDNF-213ENST00000525950 PPM1GO15355 546 aaPredicted RBP10.61□□□□□ -0.71
BDNF-213ENST00000525950 RSPH4AQ5TD94 716 aa10.61□□□□□ -0.71
BDNF-213ENST00000525950 SYNJ2O15056 1496 aa10.61□□□□□ -0.71
BDNF-213ENST00000525950 COL17A1Q9UMD9 1497 aaPredicted RBP10.61□□□□□ -0.71
BDNF-213ENST00000525950 NUP160Q12769 1436 aa10.6□□□□□ -0.71
BDNF-213ENST00000525950 TSPY4P0CV99 314 aa10.6□□□□□ -0.71
BDNF-213ENST00000525950 TSPY10P0CW01 314 aa10.6□□□□□ -0.71
BDNF-213ENST00000525950 PRDM15P57071 1507 aaPredicted RBP10.6□□□□□ -0.71
BDNF-213ENST00000525950 FAM135AQ9P2D6 1515 aa10.59□□□□□ -0.71
BDNF-213ENST00000525950 PLEKHD1A6NEE1 506 aa10.59□□□□□ -0.71
BDNF-213ENST00000525950 EIF2AK4Q9P2K8 1649 aaKnown RBP10.59□□□□□ -0.71
BDNF-213ENST00000525950 DDRGK1Q96HY6 314 aa10.59□□□□□ -0.71
BDNF-213ENST00000525950 MAST1Q9Y2H9 1570 aa10.59□□□□□ -0.71
BDNF-213ENST00000525950 DCAF11Q8TEB1 546 aa10.58□□□□□ -0.72
BDNF-213ENST00000525950 ZNF777Q9ULD5 760 aaPredicted RBP10.58□□□□□ -0.72
BDNF-213ENST00000525950 UNC13BO14795 1591 aa10.58□□□□□ -0.72
BDNF-213ENST00000525950 ATP10BO94823 1461 aa10.58□□□□□ -0.72
BDNF-213ENST00000525950 ATP10AO60312 1499 aa10.57□□□□□ -0.72
BDNF-213ENST00000525950 CCDC141Q6ZP82 1450 aa10.57□□□□□ -0.72
BDNF-213ENST00000525950 DNAJC5BQ9UF47 199 aa10.57□□□□□ -0.72
BDNF-213ENST00000525950 CCDC144AA2RUR9 1427 aa10.56□□□□□ -0.72
BDNF-213ENST00000525950 TESK2Q96S53 571 aa10.55□□□□□ -0.72
BDNF-213ENST00000525950 JPH4Q96JJ6 628 aa10.54□□□□□ -0.72
BDNF-213ENST00000525950 KDM2AQ9Y2K7 1162 aa10.54□□□□□ -0.72
BDNF-213ENST00000525950 A2MP01023 1474 aa10.54□□□□□ -0.72
BDNF-213ENST00000525950 PLA2R1Q13018 1463 aa10.54□□□□□ -0.72
BDNF-213ENST00000525950 PREX2Q70Z35 1606 aa10.54□□□□□ -0.72
BDNF-213ENST00000525950 CLASP1Q7Z460 1538 aa10.54□□□□□ -0.72
BDNF-213ENST00000525950 CNGB1Q14028 1251 aaPredicted RBP10.54□□□□□ -0.72
BDNF-213ENST00000525950 IQGAP3Q86VI3 1631 aa10.53□□□□□ -0.72
BDNF-213ENST00000525950 ERBINQ96RT1 1412 aa10.53□□□□□ -0.72
BDNF-213ENST00000525950 KDM2BQ8NHM5 1336 aa10.53□□□□□ -0.72
BDNF-213ENST00000525950 SAMD9LQ8IVG5 1584 aa10.53□□□□□ -0.72
BDNF-213ENST00000525950 RNF17Q9BXT8 1623 aaKnown RBP10.53□□□□□ -0.72
BDNF-213ENST00000525950 NEFMP07197 916 aa10.52□□□□□ -0.72
BDNF-213ENST00000525950 PLXNC1O60486 1568 aa10.52□□□□□ -0.73
BDNF-213ENST00000525950 CHMP7Q8WUX9 453 aaPredicted RBP10.52□□□□□ -0.73
BDNF-213ENST00000525950 CDCA7LQ96GN5 454 aa10.52□□□□□ -0.73
BDNF-213ENST00000525950 CDC42BPBQ9Y5S2 1711 aa10.52□□□□□ -0.73
BDNF-213ENST00000525950 MAGI2Q86UL8 1455 aa10.51□□□□□ -0.73
BDNF-213ENST00000525950 CENPQQ7L2Z9 268 aaPredicted RBP10.51□□□□□ -0.73
BDNF-213ENST00000525950 TMF1P82094 1093 aa10.51□□□□□ -0.73
BDNF-213ENST00000525950 DISP3Q9P2K9 1392 aa10.51□□□□□ -0.73
BDNF-213ENST00000525950 CRBNQ96SW2 442 aa10.51□□□□□ -0.73
BDNF-213ENST00000525950 MYO5CQ9NQX4 1742 aa10.5□□□□□ -0.73
BDNF-213ENST00000525950 NPM2Q86SE8 214 aaKnown RBP10.5□□□□□ -0.73
BDNF-213ENST00000525950 ZNF521Q96K83 1311 aa10.5□□□□□ -0.73
BDNF-213ENST00000525950 NPC1L1Q9UHC9 1359 aa10.49□□□□□ -0.73
BDNF-213ENST00000525950 HNRNPMP52272 730 aaKnown RBP eCLIP10.49□□□□□ -0.73
BDNF-213ENST00000525950 NBPF1Q3BBV0 1214 aa10.49□□□□□ -0.73
BDNF-213ENST00000525950 STAC3Q96MF2 364 aa10.49□□□□□ -0.73
BDNF-213ENST00000525950 PANK3Q9H999 370 aa10.49□□□□□ -0.73
BDNF-213ENST00000525950 EIF3AQ14152 1382 aaKnown RBP10.48□□□□□ -0.73
BDNF-213ENST00000525950 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.48□□□□□ -0.73
BDNF-213ENST00000525950 WDR7Q9Y4E6 1490 aa10.48□□□□□ -0.73
BDNF-213ENST00000525950 PIK3C2GO75747 1445 aa10.47□□□□□ -0.73
BDNF-213ENST00000525950 DUOX2Q9NRD8 1548 aa10.47□□□□□ -0.73
BDNF-213ENST00000525950 DUSP27Q5VZP5 1158 aa10.47□□□□□ -0.73
BDNF-213ENST00000525950 SYNMO15061 1565 aa10.47□□□□□ -0.73
BDNF-213ENST00000525950 SENP3-EIF4A1A0A087X0R7 540 aa10.47□□□□□ -0.73
BDNF-213ENST00000525950 FAM161AQ3B820 660 aa10.47□□□□□ -0.73
BDNF-213ENST00000525950 LAS1LQ9Y4W2 734 aaKnown RBP10.46□□□□□ -0.73
BDNF-213ENST00000525950 PLIN1O60240 522 aa10.46□□□□□ -0.73
BDNF-213ENST00000525950 TRMT2AQ8IZ69 625 aaKnown RBP10.46□□□□□ -0.73
BDNF-213ENST00000525950 NGEFQ8N5V2 710 aa10.46□□□□□ -0.73
BDNF-213ENST00000525950 IQGAP1P46940 1657 aa10.46□□□□□ -0.74
BDNF-213ENST00000525950 SALL2Q9Y467 1007 aaPredicted RBP10.46□□□□□ -0.74
BDNF-213ENST00000525950 CC2D1BQ5T0F9 858 aaKnown RBP10.45□□□□□ -0.74
BDNF-213ENST00000525950 SCAPERQ9BY12 1400 aa10.45□□□□□ -0.74
BDNF-213ENST00000525950 CDCA8Q53HL2 280 aa10.45□□□□□ -0.74
BDNF-213ENST00000525950 ADAMTS8Q9UP79 889 aa10.45□□□□□ -0.74
BDNF-213ENST00000525950 GSE1Q14687 1217 aa10.45□□□□□ -0.74
BDNF-213ENST00000525950 ABCC2Q92887 1545 aa10.44□□□□□ -0.74
BDNF-213ENST00000525950 SYCP2Q9BX26 1530 aa10.44□□□□□ -0.74
BDNF-213ENST00000525950 ERCC6Q03468 1493 aa10.44□□□□□ -0.74
BDNF-213ENST00000525950 PLEKHH1Q9ULM0 1364 aa10.44□□□□□ -0.74
BDNF-213ENST00000525950 GOLGA2Q08379 1002 aa10.44□□□□□ -0.74
BDNF-213ENST00000525950 PPP2R1AP30153 589 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms