RNA–Protein interactions for RNA: ENST00000525214.1

COPB1-203, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-203ENST00000525214 PRIM1P49642 420 aaKnown RBP14.05□□□□□ -0.16
COPB1-203ENST00000525214 NBR1Q14596 966 aa14.05□□□□□ -0.16
COPB1-203ENST00000525214 KCNH8Q96L42 1107 aa14.05□□□□□ -0.16
COPB1-203ENST00000525214 GRXCR2A6NFK2 248 aa14.03□□□□□ -0.16
COPB1-203ENST00000525214 RBM33Q96EV2 1170 aaKnown RBP14.03□□□□□ -0.16
COPB1-203ENST00000525214 COL9A1P20849 921 aa14.02□□□□□ -0.17
COPB1-203ENST00000525214 EN1Q05925 392 aaPredicted RBP14.02□□□□□ -0.17
COPB1-203ENST00000525214 HRO43593 1189 aa14.01□□□□□ -0.17
COPB1-203ENST00000525214 C6orf132Q5T0Z8 1188 aa14.01□□□□□ -0.17
COPB1-203ENST00000525214 VSIG10Q8N0Z9 540 aa14.01□□□□□ -0.17
COPB1-203ENST00000525214 ZBED2Q9BTP6 218 aa14.01□□□□□ -0.17
COPB1-203ENST00000525214 VPS9D1Q9Y2B5 631 aa14.01□□□□□ -0.17
COPB1-203ENST00000525214 PPP1R3GB7ZBB8 358 aa14□□□□□ -0.17
COPB1-203ENST00000525214 SLC4A5Q9BY07 1137 aa14□□□□□ -0.17
COPB1-203ENST00000525214 MYT1LQ9UL68 1186 aa14□□□□□ -0.17
COPB1-203ENST00000525214 OSBPP22059 807 aa13.99□□□□□ -0.17
COPB1-203ENST00000525214 MLLT3P42568 568 aaPredicted RBP13.98□□□□□ -0.17
COPB1-203ENST00000525214 TSR1Q2NL82 804 aaKnown RBP13.98□□□□□ -0.17
COPB1-203ENST00000525214 MAP3K7O43318 606 aa13.96□□□□□ -0.17
COPB1-203ENST00000525214 PROX2Q3B8N5 592 aa13.94□□□□□ -0.18
COPB1-203ENST00000525214 RNF166Q96A37 237 aaPredicted RBP13.94□□□□□ -0.18
COPB1-203ENST00000525214 SEMA3EO15041 775 aa13.92□□□□□ -0.18
COPB1-203ENST00000525214 BHMG1C9JSJ3 638 aaPredicted RBP13.91□□□□□ -0.18
COPB1-203ENST00000525214 CDHR5Q9HBB8 845 aa13.9□□□□□ -0.18
COPB1-203ENST00000525214 RABGEF1Q9UJ41 708 aa13.85□□□□□ -0.19
COPB1-203ENST00000525214 TESPA1A2RU30 521 aaPredicted RBP13.84□□□□□ -0.19
COPB1-203ENST00000525214 TRIM6-TRIM34B2RNG4 842 aa13.83□□□□□ -0.2
COPB1-203ENST00000525214 KIAA1468Q9P260 1216 aa13.82□□□□□ -0.2
COPB1-203ENST00000525214 ONECUT3O60422 494 aaPredicted RBP13.81□□□□□ -0.2
COPB1-203ENST00000525214 NPDC1Q9NQX5 325 aaPredicted RBP13.81□□□□□ -0.2
COPB1-203ENST00000525214 TSKSQ9UJT2 592 aa13.81□□□□□ -0.2
COPB1-203ENST00000525214 STAC3Q96MF2 364 aa13.8□□□□□ -0.2
COPB1-203ENST00000525214 NBPF3Q9H094 633 aa13.8□□□□□ -0.2
COPB1-203ENST00000525214 FAM198AQ9UFP1 575 aa13.8□□□□□ -0.2
COPB1-203ENST00000525214 CERKQ8TCT0 537 aa13.79□□□□□ -0.2
COPB1-203ENST00000525214 PRSS12P56730 875 aa13.78□□□□□ -0.2
COPB1-203ENST00000525214 MRPL50Q8N5N7 158 aaKnown RBP13.78□□□□□ -0.2
COPB1-203ENST00000525214 CDCA7LQ96GN5 454 aa13.78□□□□□ -0.2
COPB1-203ENST00000525214 KCTD12Q96CX2 325 aaKnown RBP13.76□□□□□ -0.21
COPB1-203ENST00000525214 SEPT9Q9UHD8 586 aaPredicted RBP13.74□□□□□ -0.21
COPB1-203ENST00000525214 C3orf80F5H4A9 247 aa13.73□□□□□ -0.21
COPB1-203ENST00000525214 PTGDRQ13258 359 aa13.72□□□□□ -0.21
COPB1-203ENST00000525214 RBM27Q9P2N5 1060 aaKnown RBP13.72□□□□□ -0.21
COPB1-203ENST00000525214 LAPTM4BQ86VI4 370 aa13.71□□□□□ -0.21
COPB1-203ENST00000525214 TTC13Q8NBP0 860 aa13.71□□□□□ -0.21
COPB1-203ENST00000525214 RBM26Q5T8P6 1007 aaKnown RBP13.7□□□□□ -0.22
COPB1-203ENST00000525214 PADI6Q6TGC4 694 aa13.7□□□□□ -0.22
COPB1-203ENST00000525214 PACS2Q86VP3 889 aa13.7□□□□□ -0.22
COPB1-203ENST00000525214 NUTM2FA1L443 756 aa13.69□□□□□ -0.22
COPB1-203ENST00000525214 WNT2BQ93097 391 aa13.69□□□□□ -0.22
COPB1-203ENST00000525214 GOLGA8CPA6NN73 597 aa13.68□□□□□ -0.22
COPB1-203ENST00000525214 THSD4Q6ZMP0 1018 aa13.68□□□□□ -0.22
COPB1-203ENST00000525214 SMAPO00193 183 aa13.67□□□□□ -0.22
COPB1-203ENST00000525214 FAM98CQ17RN3 349 aaKnown RBP13.67□□□□□ -0.22
COPB1-203ENST00000525214 SMYD5Q6GMV2 418 aa13.67□□□□□ -0.22
COPB1-203ENST00000525214 ZFRQ96KR1 1074 aaKnown RBP13.67□□□□□ -0.22
COPB1-203ENST00000525214 HCSTQ9UBK5 93 aa13.66□□□□□ -0.22
COPB1-203ENST00000525214 TATDN2Q93075 761 aa13.65□□□□□ -0.22
COPB1-203ENST00000525214 NBPF26B4DH59 902 aa13.63□□□□□ -0.23
COPB1-203ENST00000525214 PNMA3Q9UL41 463 aa13.63□□□□□ -0.23
COPB1-203ENST00000525214 GPR37O15354 613 aa13.62□□□□□ -0.23
COPB1-203ENST00000525214 NUDT18Q6ZVK8 323 aa13.62□□□□□ -0.23
COPB1-203ENST00000525214 ANKK1Q8NFD2 765 aa13.62□□□□□ -0.23
COPB1-203ENST00000525214 FCHSD2O94868 740 aa13.61□□□□□ -0.23
COPB1-203ENST00000525214 PTPN5P54829 565 aa13.61□□□□□ -0.23
COPB1-203ENST00000525214 BCAMP50895 628 aa13.6□□□□□ -0.23
COPB1-203ENST00000525214 SOWAHBA6NEL2 793 aa13.59□□□□□ -0.23
COPB1-203ENST00000525214 EYA1Q99502 592 aa13.56□□□□□ -0.24
COPB1-203ENST00000525214 HIC1Q14526 733 aa13.55□□□□□ -0.24
COPB1-203ENST00000525214 ADGRG1Q9Y653 693 aa13.54□□□□□ -0.24
COPB1-203ENST00000525214 FECHP22830 423 aa13.53□□□□□ -0.24
COPB1-203ENST00000525214 FAM161AQ3B820 660 aa13.53□□□□□ -0.24
COPB1-203ENST00000525214 SAMD7Q7Z3H4 446 aa13.53□□□□□ -0.24
COPB1-203ENST00000525214 LRCH3Q96II8 777 aa13.53□□□□□ -0.24
COPB1-203ENST00000525214 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.53□□□□□ -0.24
COPB1-203ENST00000525214 GPIHBP1Q8IV16 184 aa13.52□□□□□ -0.25
COPB1-203ENST00000525214 GNPATO15228 680 aa13.5□□□□□ -0.25
COPB1-203ENST00000525214 WBP1LQ9NX94 342 aa13.5□□□□□ -0.25
COPB1-203ENST00000525214 HPS5Q9UPZ3 1129 aa13.48□□□□□ -0.25
COPB1-203ENST00000525214 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.47□□□□□ -0.25
COPB1-203ENST00000525214 TSR3Q9UJK0 312 aaKnown RBP13.47□□□□□ -0.25
COPB1-203ENST00000525214 TULP1O00294 542 aaPredicted RBP13.46□□□□□ -0.25
COPB1-203ENST00000525214 SLC24A1O60721 1099 aa13.46□□□□□ -0.25
COPB1-203ENST00000525214 SWT1Q5T5J6 900 aaKnown RBP13.46□□□□□ -0.25
COPB1-203ENST00000525214 RBM46Q8TBY0 533 aaKnown RBP13.45□□□□□ -0.26
COPB1-203ENST00000525214 PXYLP1Q8TE99 480 aa13.43□□□□□ -0.26
COPB1-203ENST00000525214 PLA2G2EQ9NZK7 142 aa13.43□□□□□ -0.26
COPB1-203ENST00000525214 RCCD1A6NED2 376 aa13.42□□□□□ -0.26
COPB1-203ENST00000525214 DNAJB2P25686 324 aa13.41□□□□□ -0.26
COPB1-203ENST00000525214 LMOD2Q6P5Q4 547 aa13.4□□□□□ -0.26
COPB1-203ENST00000525214 NYAP1Q6ZVC0 841 aa13.4□□□□□ -0.26
COPB1-203ENST00000525214 METTL3Q86U44 580 aaKnown RBP13.4□□□□□ -0.26
COPB1-203ENST00000525214 TMEM134Q9H6X4 195 aa13.4□□□□□ -0.26
COPB1-203ENST00000525214 PPP4CP60510 307 aa13.39□□□□□ -0.27
COPB1-203ENST00000525214 RNF40O75150 1001 aa13.38□□□□□ -0.27
COPB1-203ENST00000525214 OATP04181 439 aa13.38□□□□□ -0.27
COPB1-203ENST00000525214 HDGFP51858 240 aaKnown RBP13.38□□□□□ -0.27
COPB1-203ENST00000525214 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.35□□□□□ -0.27
COPB1-203ENST00000525214 SLF2Q8IX21 1173 aa13.35□□□□□ -0.27
COPB1-203ENST00000525214 PHOX2BQ99453 314 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 258.5 ms