RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 TNS4Q8IZW8 715 aa6.85□□□□□ -1.31
CSDE1-209ENST00000525132 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.85□□□□□ -1.315e-12■■□□□ 14.3
CSDE1-209ENST00000525132 PPP1R37O75864 691 aa6.84□□□□□ -1.31
CSDE1-209ENST00000525132 DPY19L2Q6NUT2 758 aa6.84□□□□□ -1.31
CSDE1-209ENST00000525132 CEP170Q5SW79 1584 aa6.83□□□□□ -1.32
CSDE1-209ENST00000525132 BCORL1Q5H9F3 1711 aa6.82□□□□□ -1.32
CSDE1-209ENST00000525132 SLAIN1Q8ND83 568 aa6.82□□□□□ -1.32
CSDE1-209ENST00000525132 ARID4BQ4LE39 1312 aaPredicted RBP6.81□□□□□ -1.32
CSDE1-209ENST00000525132 SEC24BO95487 1268 aa6.81□□□□□ -1.32
CSDE1-209ENST00000525132 PLCG2P16885 1265 aa6.81□□□□□ -1.32
CSDE1-209ENST00000525132 GOLGA2Q08379 1002 aa6.81□□□□□ -1.32
CSDE1-209ENST00000525132 POTEB3A0JP26 581 aa6.8□□□□□ -1.32
CSDE1-209ENST00000525132 POTEBQ6S5H4 581 aa6.8□□□□□ -1.32
CSDE1-209ENST00000525132 PLCB2Q00722 1185 aa6.79□□□□□ -1.32
CSDE1-209ENST00000525132 MARVELD3Q96A59 401 aa6.79□□□□□ -1.32
CSDE1-209ENST00000525132 RYDENQ9NUL5 291 aaKnown RBP6.79□□□□□ -1.32
CSDE1-209ENST00000525132 MICALL2Q8IY33 904 aa6.78□□□□□ -1.32
CSDE1-209ENST00000525132 ADCY10Q96PN6 1610 aa6.78□□□□□ -1.32
CSDE1-209ENST00000525132 RAPGEF6Q8TEU7 1601 aa6.77□□□□□ -1.33
CSDE1-209ENST00000525132 KRTAP3-3Q9BYR6 98 aa6.77□□□□□ -1.33
CSDE1-209ENST00000525132 KRTAP3-2Q9BYR7 98 aa6.77□□□□□ -1.33
CSDE1-209ENST00000525132 BOLA1Q9Y3E2 137 aa6.77□□□□□ -1.33
CSDE1-209ENST00000525132 TEX14Q8IWB6 1497 aa6.77□□□□□ -1.33
CSDE1-209ENST00000525132 GLI2P10070 1586 aa6.77□□□□□ -1.33
CSDE1-209ENST00000525132 TMEM92Q6UXU6 159 aa6.76□□□□□ -1.33
CSDE1-209ENST00000525132 SPRYD3Q8NCJ5 442 aa6.76□□□□□ -1.33
CSDE1-209ENST00000525132 TDRD9Q8NDG6 1382 aaKnown RBP6.76□□□□□ -1.33
CSDE1-209ENST00000525132 KIF3CO14782 793 aa6.75□□□□□ -1.33
CSDE1-209ENST00000525132 SLC24A1O60721 1099 aa6.75□□□□□ -1.33
CSDE1-209ENST00000525132 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.75□□□□□ -1.33
CSDE1-209ENST00000525132 TARBP1Q13395 1621 aaKnown RBP6.75□□□□□ -1.33
CSDE1-209ENST00000525132 PAXIP1Q6ZW49 1069 aaPredicted RBP6.74□□□□□ -1.33
CSDE1-209ENST00000525132 CADPS2Q86UW7 1296 aa6.74□□□□□ -1.33
CSDE1-209ENST00000525132 L3MBTL3Q96JM7 780 aaPredicted RBP6.74□□□□□ -1.33
CSDE1-209ENST00000525132 PREX1Q8TCU6 1659 aa6.74□□□□□ -1.33
CSDE1-209ENST00000525132 RXRBP28702 533 aa6.73□□□□□ -1.33
CSDE1-209ENST00000525132 ALKQ9UM73 1620 aa6.72□□□□□ -1.33
CSDE1-209ENST00000525132 CRISPLD2Q9H0B8 497 aa6.72□□□□□ -1.33
CSDE1-209ENST00000525132 NCKAP5LQ9HCH0 1330 aa6.72□□□□□ -1.33
CSDE1-209ENST00000525132 PLB1Q6P1J6 1458 aa6.72□□□□□ -1.33
CSDE1-209ENST00000525132 NUTM2BA6NNL0 878 aaPredicted RBP6.71□□□□□ -1.34
CSDE1-209ENST00000525132 NUTM2EB1AL46 878 aaPredicted RBP6.71□□□□□ -1.34
CSDE1-209ENST00000525132 NUTM2DQ5VT03 806 aaPredicted RBP6.71□□□□□ -1.34
CSDE1-209ENST00000525132 NUTM2AQ8IVF1 878 aaPredicted RBP6.71□□□□□ -1.34
CSDE1-209ENST00000525132 MAGI1Q96QZ7 1491 aaPredicted RBP6.71□□□□□ -1.34
CSDE1-209ENST00000525132 GIGYF1O75420 1035 aaPredicted RBP6.7□□□□□ -1.34
CSDE1-209ENST00000525132 TOPBP1Q92547 1522 aa6.7□□□□□ -1.34
CSDE1-209ENST00000525132 HRCP23327 699 aa6.69□□□□□ -1.34
CSDE1-209ENST00000525132 CEBPAP49715 358 aaPredicted RBP6.69□□□□□ -1.34
CSDE1-209ENST00000525132 MFSD10Q14728 455 aa6.69□□□□□ -1.34
CSDE1-209ENST00000525132 FAM161AQ3B820 660 aa6.69□□□□□ -1.34
CSDE1-209ENST00000525132 RNF166Q96A37 237 aaPredicted RBP6.69□□□□□ -1.34
CSDE1-209ENST00000525132 MAP3K4Q9Y6R4 1608 aa6.68□□□□□ -1.34
CSDE1-209ENST00000525132 LRRC7Q96NW7 1537 aa6.68□□□□□ -1.34
CSDE1-209ENST00000525132 CFAP44Q96MT7 982 aa6.68□□□□□ -1.34
CSDE1-209ENST00000525132 TSHZ2Q9NRE2 1034 aa6.68□□□□□ -1.34
CSDE1-209ENST00000525132 PRG4Q92954 1404 aaPredicted RBP6.67□□□□□ -1.34
CSDE1-209ENST00000525132 PSDA5PKW4 1024 aaPredicted RBP6.67□□□□□ -1.34
CSDE1-209ENST00000525132 ASXL2Q76L83 1435 aa6.67□□□□□ -1.34
CSDE1-209ENST00000525132 KIAA0556O60303 1618 aa6.66□□□□□ -1.34
CSDE1-209ENST00000525132 SHROOM2Q13796 1616 aa6.66□□□□□ -1.34
CSDE1-209ENST00000525132 ZNF772Q68DY9 489 aaPredicted RBP6.66□□□□□ -1.34
CSDE1-209ENST00000525132 GPHNQ9NQX3 736 aaPredicted RBP6.66□□□□□ -1.34
CSDE1-209ENST00000525132 PTPRKQ15262 1439 aa6.66□□□□□ -1.34
CSDE1-209ENST00000525132 TNS2Q63HR2 1409 aa6.66□□□□□ -1.34
CSDE1-209ENST00000525132 UHRF1BP1Q6BDS2 1440 aa6.66□□□□□ -1.34
CSDE1-209ENST00000525132 WWC3Q9ULE0 1092 aa6.65□□□□□ -1.34
CSDE1-209ENST00000525132 CFTRP13569 1480 aa6.65□□□□□ -1.35
CSDE1-209ENST00000525132 LOC100996750A0A140TA64 210 aa6.64□□□□□ -1.35
CSDE1-209ENST00000525132 C2orf72A6NCS6 295 aa6.64□□□□□ -1.35
CSDE1-209ENST00000525132 KRTAP4-6Q9BYQ5 205 aa6.64□□□□□ -1.35
CSDE1-209ENST00000525132 NCOA1Q15788 1441 aa6.64□□□□□ -1.35
CSDE1-209ENST00000525132 CDK12Q9NYV4 1490 aaPredicted RBP6.64□□□□□ -1.35
CSDE1-209ENST00000525132 KIAA0586Q9BVV6 1533 aa6.64□□□□□ -1.35
CSDE1-209ENST00000525132 NHSL1Q5SYE7 1610 aa6.64□□□□□ -1.35
CSDE1-209ENST00000525132 HOXB3P14651 431 aaPredicted RBP6.63□□□□□ -1.35
CSDE1-209ENST00000525132 FOXK1P85037 733 aa6.63□□□□□ -1.35
CSDE1-209ENST00000525132 C3orf67Q6ZVT6 689 aa6.63□□□□□ -1.35
CSDE1-209ENST00000525132 HS3ST6Q96QI5 342 aa6.63□□□□□ -1.35
CSDE1-209ENST00000525132 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.63□□□□□ -1.35
CSDE1-209ENST00000525132 SNPHO15079 494 aa6.62□□□□□ -1.35
CSDE1-209ENST00000525132 KDM2AQ9Y2K7 1162 aa6.62□□□□□ -1.35
CSDE1-209ENST00000525132 PITPNM2Q9BZ72 1349 aa6.61□□□□□ -1.35
CSDE1-209ENST00000525132 CAMK2BQ13554 666 aa6.61□□□□□ -1.35
CSDE1-209ENST00000525132 DSG2Q14126 1118 aa6.61□□□□□ -1.35
CSDE1-209ENST00000525132 RAD54L2Q9Y4B4 1467 aa6.6□□□□□ -1.35
CSDE1-209ENST00000525132 HSPA6P17066 643 aa6.6□□□□□ -1.35
CSDE1-209ENST00000525132 EPRSP07814 1512 aaKnown RBP6.6□□□□□ -1.35
CSDE1-209ENST00000525132 ATAD2Q6PL18 1390 aa6.59□□□□□ -1.35
CSDE1-209ENST00000525132 FAM205CA6NFA0 338 aa6.59□□□□□ -1.35
CSDE1-209ENST00000525132 DLL1O00548 723 aa6.59□□□□□ -1.35
CSDE1-209ENST00000525132 MLECQ14165 292 aa6.59□□□□□ -1.35
CSDE1-209ENST00000525132 CUX1P39880 1505 aa6.59□□□□□ -1.35
CSDE1-209ENST00000525132 RGS12O14924 1447 aa6.59□□□□□ -1.36
CSDE1-209ENST00000525132 G3V3G9 751 aa6.58□□□□□ -1.36
CSDE1-209ENST00000525132 PDE4AP27815 886 aa6.58□□□□□ -1.36
CSDE1-209ENST00000525132 EMP3P54852 163 aa6.58□□□□□ -1.36
CSDE1-209ENST00000525132 GRIN2BQ13224 1484 aa6.58□□□□□ -1.36
CSDE1-209ENST00000525132 MROH2BQ7Z745 1585 aa6.57□□□□□ -1.36
CSDE1-209ENST00000525132 PPP1R15BQ5SWA1 713 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms