RNA–Protein interactions for RNA: ENST00000524843.5

CASP4-204, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 978 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-204ENST00000524843 ATXN8OSP0DMR3 200 aa10.6□□□□□ -0.71
CASP4-204ENST00000524843 ASXL2Q76L83 1435 aa10.59□□□□□ -0.71
CASP4-204ENST00000524843 DEPDC5O75140 1603 aa10.59□□□□□ -0.71
CASP4-204ENST00000524843 NUP155O75694 1391 aa10.59□□□□□ -0.71
CASP4-204ENST00000524843 FANCAO15360 1455 aa10.59□□□□□ -0.71
CASP4-204ENST00000524843 HNRNPMP52272 730 aaKnown RBP eCLIP10.58□□□□□ -0.72
CASP4-204ENST00000524843 ATP7AQ04656 1500 aa10.58□□□□□ -0.72
CASP4-204ENST00000524843 UHRF1BP1Q6BDS2 1440 aa10.57□□□□□ -0.72
CASP4-204ENST00000524843 ATP10AO60312 1499 aa10.56□□□□□ -0.72
CASP4-204ENST00000524843 ADGRL1O94910 1474 aa10.55□□□□□ -0.72
CASP4-204ENST00000524843 RALGAPBQ86X10 1494 aa10.55□□□□□ -0.72
CASP4-204ENST00000524843 PKD2Q13563 968 aa10.55□□□□□ -0.72
CASP4-204ENST00000524843 MIER1Q8N108 512 aa10.55□□□□□ -0.72
CASP4-204ENST00000524843 U3KPZ7 1027 aaPredicted RBP10.55□□□□□ -0.72
CASP4-204ENST00000524843 TET3O43151 1660 aa10.54□□□□□ -0.72
CASP4-204ENST00000524843 KDM5CP41229 1560 aa10.54□□□□□ -0.72
CASP4-204ENST00000524843 TRAPPC8Q9Y2L5 1435 aa10.54□□□□□ -0.72
CASP4-204ENST00000524843 ZNF518AQ6AHZ1 1483 aa10.54□□□□□ -0.72
CASP4-204ENST00000524843 PRDM15P57071 1507 aaPredicted RBP10.53□□□□□ -0.72
CASP4-204ENST00000524843 VWDEQ8N2E2 1590 aa10.53□□□□□ -0.72
CASP4-204ENST00000524843 NPM1P06748 294 aaKnown RBP eCLIP10.53□□□□□ -0.72
CASP4-204ENST00000524843 L3MBTL2Q969R5 705 aa10.53□□□□□ -0.72
CASP4-204ENST00000524843 LAMC1P11047 1609 aa10.53□□□□□ -0.72
CASP4-204ENST00000524843 BCORL1Q5H9F3 1711 aa10.53□□□□□ -0.72
CASP4-204ENST00000524843 NEURL4Q96JN8 1562 aa10.52□□□□□ -0.72
CASP4-204ENST00000524843 EIF4G2P78344 907 aaKnown RBP eCLIP10.52□□□□□ -0.73
CASP4-204ENST00000524843 KCNH8Q96L42 1107 aa10.52□□□□□ -0.73
CASP4-204ENST00000524843 NEO1Q92859 1461 aa10.52□□□□□ -0.73
CASP4-204ENST00000524843 SPAG9O60271 1321 aaKnown RBP10.52□□□□□ -0.73
CASP4-204ENST00000524843 RNF17Q9BXT8 1623 aaKnown RBP10.51□□□□□ -0.73
CASP4-204ENST00000524843 CCDC144AA2RUR9 1427 aa10.51□□□□□ -0.73
CASP4-204ENST00000524843 GLI2P10070 1586 aa10.51□□□□□ -0.73
CASP4-204ENST00000524843 HECW2Q9P2P5 1572 aa10.51□□□□□ -0.73
CASP4-204ENST00000524843 TRPM2O94759 1503 aa10.5□□□□□ -0.73
CASP4-204ENST00000524843 SPHKAPQ2M3C7 1700 aa10.5□□□□□ -0.73
CASP4-204ENST00000524843 POGZQ7Z3K3 1410 aa10.5□□□□□ -0.73
CASP4-204ENST00000524843 RNF39Q9H2S5 420 aa10.49□□□□□ -0.73
CASP4-204ENST00000524843 KIDINS220Q9ULH0 1771 aa10.49□□□□□ -0.73
CASP4-204ENST00000524843 SPATA31E1Q6ZUB1 1445 aa10.49□□□□□ -0.73
CASP4-204ENST00000524843 SCAPERQ9BY12 1400 aa10.49□□□□□ -0.73
CASP4-204ENST00000524843 LMTK2Q8IWU2 1503 aa10.48□□□□□ -0.73
CASP4-204ENST00000524843 MAP3K4Q9Y6R4 1608 aa10.48□□□□□ -0.73
CASP4-204ENST00000524843 CEP152O94986 1710 aa10.48□□□□□ -0.73
CASP4-204ENST00000524843 KANK1Q14678 1352 aa10.48□□□□□ -0.73
CASP4-204ENST00000524843 MLH3Q9UHC1 1453 aa10.48□□□□□ -0.73
CASP4-204ENST00000524843 TRPM1Q7Z4N2 1603 aa10.47□□□□□ -0.73
CASP4-204ENST00000524843 E9PCH4 1651 aa10.47□□□□□ -0.73
CASP4-204ENST00000524843 CCER2I3L3R5 266 aa10.47□□□□□ -0.73
CASP4-204ENST00000524843 C1QBPQ07021 282 aaKnown RBP10.47□□□□□ -0.73
CASP4-204ENST00000524843 CD109Q6YHK3 1445 aa10.47□□□□□ -0.73
CASP4-204ENST00000524843 CNTLNQ9NXG0 1405 aa10.47□□□□□ -0.73
CASP4-204ENST00000524843 MROH1Q8NDA8 1641 aa10.47□□□□□ -0.73
CASP4-204ENST00000524843 HSPA5P11021 654 aaKnown RBP10.46□□□□□ -0.73
CASP4-204ENST00000524843 ARID4BQ4LE39 1312 aaPredicted RBP10.46□□□□□ -0.73
CASP4-204ENST00000524843 RIMBP3CA6NJZ7 1639 aa10.45□□□□□ -0.74
CASP4-204ENST00000524843 RIMBP3BA6NNM3 1639 aa10.45□□□□□ -0.74
CASP4-204ENST00000524843 RIMBP3Q9UFD9 1639 aa10.45□□□□□ -0.74
CASP4-204ENST00000524843 EFCAB6Q5THR3 1501 aa10.45□□□□□ -0.74
CASP4-204ENST00000524843 DHX29Q7Z478 1369 aaKnown RBP10.45□□□□□ -0.74
CASP4-204ENST00000524843 PLA2R1Q13018 1463 aa10.44□□□□□ -0.74
CASP4-204ENST00000524843 PTPRTO14522 1441 aa10.44□□□□□ -0.74
CASP4-204ENST00000524843 PRAG1Q86YV5 1406 aa10.44□□□□□ -0.74
CASP4-204ENST00000524843 CCDC7Q96M83 1385 aa10.44□□□□□ -0.74
CASP4-204ENST00000524843 ANP32CO43423 234 aa10.44□□□□□ -0.74
CASP4-204ENST00000524843 ZC3H13Q5T200 1668 aaKnown RBP10.44□□□□□ -0.74
CASP4-204ENST00000524843 A2MP01023 1474 aa10.43□□□□□ -0.74
CASP4-204ENST00000524843 ROCK2O75116 1388 aaKnown RBP10.43□□□□□ -0.74
CASP4-204ENST00000524843 USP47Q96K76 1375 aa10.43□□□□□ -0.74
CASP4-204ENST00000524843 DDX10Q13206 875 aaKnown RBP10.43□□□□□ -0.74
CASP4-204ENST00000524843 NBPF8Q3BBV2 869 aa10.43□□□□□ -0.74
CASP4-204ENST00000524843 STAC3Q96MF2 364 aa10.43□□□□□ -0.74
CASP4-204ENST00000524843 GPRASP1Q5JY77 1395 aa10.42□□□□□ -0.74
CASP4-204ENST00000524843 RICTORQ6R327 1708 aa10.42□□□□□ -0.74
CASP4-204ENST00000524843 ABCA6Q8N139 1617 aa10.42□□□□□ -0.74
CASP4-204ENST00000524843 ZMYM4Q5VZL5 1548 aa10.42□□□□□ -0.74
CASP4-204ENST00000524843 KIAA1210Q9ULL0 1709 aa10.41□□□□□ -0.74
CASP4-204ENST00000524843 FRMPD1Q5SYB0 1578 aa10.41□□□□□ -0.74
CASP4-204ENST00000524843 CLTCL1P53675 1640 aa10.4□□□□□ -0.74
CASP4-204ENST00000524843 MADDQ8WXG6 1647 aa10.4□□□□□ -0.74
CASP4-204ENST00000524843 DIP2BQ9P265 1576 aa10.4□□□□□ -0.74
CASP4-204ENST00000524843 WASHC2AQ641Q2 1341 aa10.4□□□□□ -0.74
CASP4-204ENST00000524843 PPRC1Q5VV67 1664 aaKnown RBP10.4□□□□□ -0.74
CASP4-204ENST00000524843 DIP2CQ9Y2E4 1556 aa10.39□□□□□ -0.75
CASP4-204ENST00000524843 AFAP1Q8N556 730 aa10.39□□□□□ -0.75
CASP4-204ENST00000524843 KIF1BO60333 1816 aa10.39□□□□□ -0.75
CASP4-204ENST00000524843 MYOM2P54296 1465 aa10.38□□□□□ -0.75
CASP4-204ENST00000524843 REREQ9P2R6 1566 aa10.38□□□□□ -0.75
CASP4-204ENST00000524843 YTHDC1Q96MU7 727 aaKnown RBP10.37□□□□□ -0.75
CASP4-204ENST00000524843 IFT172Q9UG01 1749 aa10.37□□□□□ -0.75
CASP4-204ENST00000524843 IQGAP1P46940 1657 aa10.36□□□□□ -0.75
CASP4-204ENST00000524843 ABCC3O15438 1527 aa10.36□□□□□ -0.75
CASP4-204ENST00000524843 CAMSAP1Q5T5Y3 1602 aa10.36□□□□□ -0.75
CASP4-204ENST00000524843 KIF7Q2M1P5 1343 aa10.35□□□□□ -0.75
CASP4-204ENST00000524843 ADGRB3O60242 1522 aa10.35□□□□□ -0.75
CASP4-204ENST00000524843 COL17A1Q9UMD9 1497 aaPredicted RBP10.35□□□□□ -0.75
CASP4-204ENST00000524843 DCAF11Q8TEB1 546 aa10.34□□□□□ -0.75
CASP4-204ENST00000524843 HIRIP3Q9BW71 556 aaPredicted RBP10.34□□□□□ -0.75
CASP4-204ENST00000524843 CARD11Q9BXL7 1154 aa10.34□□□□□ -0.75
CASP4-204ENST00000524843 KIF3BO15066 747 aa10.33□□□□□ -0.76
CASP4-204ENST00000524843 ZNF326Q5BKZ1 582 aaKnown RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms