RNA–Protein interactions for RNA: ENST00000524657.1

KDM2A-204, Transcript of lysine demethylase 2A, humanhuman

TSL 1 (best)

Gene KDM2A, Length 3,692 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-204ENST00000524657 MCM4P33991 863 aa12.49□□□□□ -0.41
KDM2A-204ENST00000524657 RGL3Q3MIN7 710 aa12.49□□□□□ -0.41
KDM2A-204ENST00000524657 TBC1D2Q9BYX2 928 aa12.49□□□□□ -0.41
KDM2A-204ENST00000524657 ROCK2O75116 1388 aaKnown RBP12.49□□□□□ -0.41
KDM2A-204ENST00000524657 WDR43Q15061 677 aaKnown RBP eCLIP12.49□□□□□ -0.41
KDM2A-204ENST00000524657 BICRAQ9NZM4 1560 aa12.48□□□□□ -0.41
KDM2A-204ENST00000524657 COG6Q9Y2V7 657 aa12.48□□□□□ -0.41
KDM2A-204ENST00000524657 PANK3Q9H999 370 aa12.47□□□□□ -0.41
KDM2A-204ENST00000524657 GRPEL1Q9HAV7 217 aa12.47□□□□□ -0.41
KDM2A-204ENST00000524657 FAM13BQ9NYF5 915 aa12.47□□□□□ -0.41
KDM2A-204ENST00000524657 GOLGA2Q08379 1002 aa12.46□□□□□ -0.41
KDM2A-204ENST00000524657 DUSP27Q5VZP5 1158 aa12.46□□□□□ -0.41
KDM2A-204ENST00000524657 PANK1Q8TE04 598 aa12.46□□□□□ -0.41
KDM2A-204ENST00000524657 KIAA1211Q6ZU35 1233 aa12.46□□□□□ -0.42
KDM2A-204ENST00000524657 MRE11P49959 708 aa12.46□□□□□ -0.42
KDM2A-204ENST00000524657 ANTXR1Q9H6X2 564 aa12.45□□□□□ -0.42
KDM2A-204ENST00000524657 ZBTB7CA1YPR0 619 aa12.45□□□□□ -0.42
KDM2A-204ENST00000524657 FSD2A1L4K1 749 aa12.44□□□□□ -0.42
KDM2A-204ENST00000524657 FBLN2P98095 1184 aa12.44□□□□□ -0.42
KDM2A-204ENST00000524657 MFAP1P55081 439 aaKnown RBP12.44□□□□□ -0.42
KDM2A-204ENST00000524657 FOXD4L1Q9NU39 408 aa12.43□□□□□ -0.42
KDM2A-204ENST00000524657 RAD54L2Q9Y4B4 1467 aa12.43□□□□□ -0.42
KDM2A-204ENST00000524657 SPINK5Q9NQ38 1064 aaPredicted RBP12.42□□□□□ -0.42
KDM2A-204ENST00000524657 HECW1Q76N89 1606 aa12.42□□□□□ -0.42
KDM2A-204ENST00000524657 PLEKHH1Q9ULM0 1364 aa12.42□□□□□ -0.42
KDM2A-204ENST00000524657 NEUROD2Q15784 382 aa12.42□□□□□ -0.42
KDM2A-204ENST00000524657 NBPF1Q3BBV0 1214 aa12.42□□□□□ -0.42
KDM2A-204ENST00000524657 SNAPC4Q5SXM2 1469 aa12.42□□□□□ -0.42
KDM2A-204ENST00000524657 ABCA5Q8WWZ7 1642 aa12.42□□□□□ -0.42
KDM2A-204ENST00000524657 CLUAP1Q96AJ1 413 aa12.41□□□□□ -0.42
KDM2A-204ENST00000524657 PDCL3Q9H2J4 239 aa12.41□□□□□ -0.42
KDM2A-204ENST00000524657 PRDM10Q9NQV6 1147 aa12.41□□□□□ -0.42
KDM2A-204ENST00000524657 APAF1O14727 1248 aa12.4□□□□□ -0.42
KDM2A-204ENST00000524657 BCL2L13Q9BXK5 485 aa12.4□□□□□ -0.42
KDM2A-204ENST00000524657 GAS2L3Q86XJ1 694 aa12.4□□□□□ -0.43
KDM2A-204ENST00000524657 PER1O15534 1290 aaPredicted RBP12.39□□□□□ -0.43
KDM2A-204ENST00000524657 PARD3Q8TEW0 1356 aa12.39□□□□□ -0.43
KDM2A-204ENST00000524657 CHMP5Q9NZZ3 219 aa12.39□□□□□ -0.43
KDM2A-204ENST00000524657 R3HCC1Q9Y3T6 440 aaKnown RBP12.39□□□□□ -0.43
KDM2A-204ENST00000524657 SUPT6HQ7KZ85 1726 aaKnown RBP12.38□□□□□ -0.43
KDM2A-204ENST00000524657 EFCAB5A4FU69 1503 aa12.38□□□□□ -0.43
KDM2A-204ENST00000524657 ZHX1Q9UKY1 873 aaPredicted RBP12.38□□□□□ -0.43
KDM2A-204ENST00000524657 TPM2P07951 284 aa12.38□□□□□ -0.43
KDM2A-204ENST00000524657 TBC1D32Q96NH3 1257 aa12.38□□□□□ -0.43
KDM2A-204ENST00000524657 MAPK8IP3Q9UPT6 1336 aa12.37□□□□□ -0.43
KDM2A-204ENST00000524657 MAGI3Q5TCQ9 1506 aa12.37□□□□□ -0.43
KDM2A-204ENST00000524657 PDZRN3Q9UPQ7 1066 aa12.36□□□□□ -0.43
KDM2A-204ENST00000524657 TNNQ9UQP3 1299 aa12.36□□□□□ -0.43
KDM2A-204ENST00000524657 MSNP26038 577 aaKnown RBP12.35□□□□□ -0.43
KDM2A-204ENST00000524657 SLFN5Q08AF3 891 aa12.35□□□□□ -0.43
KDM2A-204ENST00000524657 DMRT2Q9Y5R5 561 aa12.35□□□□□ -0.43
KDM2A-204ENST00000524657 UGGT2Q9NYU1 1516 aa12.35□□□□□ -0.43
KDM2A-204ENST00000524657 TDRD9Q8NDG6 1382 aaKnown RBP12.35□□□□□ -0.43
KDM2A-204ENST00000524657 HSCBQ8IWL3 235 aa12.35□□□□□ -0.43
KDM2A-204ENST00000524657 KNSTRNQ9Y448 316 aa12.35□□□□□ -0.43
KDM2A-204ENST00000524657 EHBP1L1Q8N3D4 1523 aa12.35□□□□□ -0.43
KDM2A-204ENST00000524657 NCLP19338 710 aaKnown RBP12.34□□□□□ -0.43
KDM2A-204ENST00000524657 C22orf23Q9BZE7 217 aa12.34□□□□□ -0.43
KDM2A-204ENST00000524657 NUP155O75694 1391 aa12.34□□□□□ -0.43
KDM2A-204ENST00000524657 ANP32BQ92688 251 aaKnown RBP12.34□□□□□ -0.43
KDM2A-204ENST00000524657 CFDP1Q9UEE9 299 aaPredicted RBP12.34□□□□□ -0.43
KDM2A-204ENST00000524657 DAPK1P53355 1430 aa12.34□□□□□ -0.43
KDM2A-204ENST00000524657 ABCC5O15440 1437 aa12.33□□□□□ -0.44
KDM2A-204ENST00000524657 PCDHB15Q9Y5E8 787 aa12.33□□□□□ -0.44
KDM2A-204ENST00000524657 KIAA1107Q9UPP5 1409 aa12.32□□□□□ -0.44
KDM2A-204ENST00000524657 DDX11L8A8MPP1 907 aa12.32□□□□□ -0.44
KDM2A-204ENST00000524657 PPP2R1AP30153 589 aa12.32□□□□□ -0.44
KDM2A-204ENST00000524657 RRP7AQ9Y3A4 280 aaKnown RBP12.32□□□□□ -0.44
KDM2A-204ENST00000524657 CDK13Q14004 1512 aaKnown RBP12.32□□□□□ -0.44
KDM2A-204ENST00000524657 KDM5CP41229 1560 aa12.32□□□□□ -0.44
KDM2A-204ENST00000524657 PRDM4Q9UKN5 801 aa12.32□□□□□ -0.44
KDM2A-204ENST00000524657 GRIN2BQ13224 1484 aa12.32□□□□□ -0.44
KDM2A-204ENST00000524657 GCC2Q8IWJ2 1684 aa12.31□□□□□ -0.44
KDM2A-204ENST00000524657 RIPK4P57078 832 aa12.31□□□□□ -0.44
KDM2A-204ENST00000524657 CALD1Q05682 793 aaKnown RBP12.31□□□□□ -0.44
KDM2A-204ENST00000524657 AEBP2Q6ZN18 517 aaPredicted RBP12.31□□□□□ -0.44
KDM2A-204ENST00000524657 HSP90AB1P08238 724 aaKnown RBP12.31□□□□□ -0.44
KDM2A-204ENST00000524657 XPCQ01831 940 aaPredicted RBP12.31□□□□□ -0.44
KDM2A-204ENST00000524657 CGNL1Q0VF96 1302 aa12.31□□□□□ -0.44
KDM2A-204ENST00000524657 CENPJQ9HC77 1338 aaPredicted RBP12.31□□□□□ -0.44
KDM2A-204ENST00000524657 POLR1AO95602 1720 aaPredicted RBP12.31□□□□□ -0.44
KDM2A-204ENST00000524657 NASPP49321 788 aaPredicted RBP12.31□□□□□ -0.44
KDM2A-204ENST00000524657 TNPO1Q92973 898 aaKnown RBP12.31□□□□□ -0.44
KDM2A-204ENST00000524657 DISP3Q9P2K9 1392 aa12.3□□□□□ -0.44
KDM2A-204ENST00000524657 PZPP20742 1482 aa12.3□□□□□ -0.44
KDM2A-204ENST00000524657 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.3□□□□□ -0.445e-7■□□□□ 9.3
KDM2A-204ENST00000524657 BLMP54132 1417 aaPredicted RBP12.3□□□□□ -0.44
KDM2A-204ENST00000524657 TCOF1Q13428 1488 aaKnown RBP12.29□□□□□ -0.44
KDM2A-204ENST00000524657 AAMPQ13685 434 aa12.29□□□□□ -0.44
KDM2A-204ENST00000524657 RLBP1P12271 317 aa12.29□□□□□ -0.44
KDM2A-204ENST00000524657 EIF3AQ14152 1382 aaKnown RBP12.28□□□□□ -0.44
KDM2A-204ENST00000524657 TMF1P82094 1093 aa12.28□□□□□ -0.44
KDM2A-204ENST00000524657 ZSCAN30Q86W11 494 aa12.28□□□□□ -0.44
KDM2A-204ENST00000524657 ZMYM4Q5VZL5 1548 aa12.28□□□□□ -0.44
KDM2A-204ENST00000524657 UQCRHLA0A096LP55 91 aa12.28□□□□□ -0.44
KDM2A-204ENST00000524657 UQCRHP07919 91 aa12.28□□□□□ -0.44
KDM2A-204ENST00000524657 TNNT2P45379 298 aaPredicted RBP12.28□□□□□ -0.44
KDM2A-204ENST00000524657 THOC2Q8NI27 1593 aaKnown RBP12.28□□□□□ -0.44
KDM2A-204ENST00000524657 LRRIQ1Q96JM4 1722 aa12.27□□□□□ -0.44
KDM2A-204ENST00000524657 MBD5Q9P267 1494 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms