RNA–Protein interactions for RNA: ENST00000524563.1

NUP98-213, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 841 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-213ENST00000524563 ARHGEF5Q12774 1597 aa10.33□□□□□ -0.76
NUP98-213ENST00000524563 RNF17Q9BXT8 1623 aaKnown RBP10.33□□□□□ -0.76
NUP98-213ENST00000524563 EIF2AK4Q9P2K8 1649 aaKnown RBP10.33□□□□□ -0.76
NUP98-213ENST00000524563 MAP3K1Q13233 1512 aa10.33□□□□□ -0.76
NUP98-213ENST00000524563 IQGAP1P46940 1657 aa10.32□□□□□ -0.76
NUP98-213ENST00000524563 NCKAP5LQ9HCH0 1330 aa10.32□□□□□ -0.76
NUP98-213ENST00000524563 PZPP20742 1482 aa10.31□□□□□ -0.76
NUP98-213ENST00000524563 TCOF1Q13428 1488 aaKnown RBP10.31□□□□□ -0.76
NUP98-213ENST00000524563 LRRC9Q6ZRR7 1453 aa10.31□□□□□ -0.76
NUP98-213ENST00000524563 RTEL1-TNFRSF6BF6WH68 1400 aa10.31□□□□□ -0.76
NUP98-213ENST00000524563 SCAF1Q9H7N4 1312 aaKnown RBP10.31□□□□□ -0.76
NUP98-213ENST00000524563 NEURL4Q96JN8 1562 aa10.31□□□□□ -0.76
NUP98-213ENST00000524563 TNRQ92752 1358 aa10.3□□□□□ -0.76
NUP98-213ENST00000524563 ZNF335Q9H4Z2 1342 aaPredicted RBP10.3□□□□□ -0.76
NUP98-213ENST00000524563 ZNF644Q9H582 1327 aaPredicted RBP10.3□□□□□ -0.76
NUP98-213ENST00000524563 MBD5Q9P267 1494 aa10.3□□□□□ -0.76
NUP98-213ENST00000524563 PKD2Q13563 968 aa10.29□□□□□ -0.76
NUP98-213ENST00000524563 PPP6R1Q9UPN7 881 aa10.29□□□□□ -0.76
NUP98-213ENST00000524563 SYNMO15061 1565 aa10.29□□□□□ -0.76
NUP98-213ENST00000524563 MAST1Q9Y2H9 1570 aa10.29□□□□□ -0.76
NUP98-213ENST00000524563 CPS1P31327 1500 aa10.28□□□□□ -0.76
NUP98-213ENST00000524563 UGGT1Q9NYU2 1555 aa10.28□□□□□ -0.76
NUP98-213ENST00000524563 UBAP1LF5GYI3 381 aa10.28□□□□□ -0.76
NUP98-213ENST00000524563 KIF3BO15066 747 aa10.28□□□□□ -0.76
NUP98-213ENST00000524563 DEPDC5O75140 1603 aa10.27□□□□□ -0.77
NUP98-213ENST00000524563 DHX29Q7Z478 1369 aaKnown RBP10.26□□□□□ -0.77
NUP98-213ENST00000524563 NLRP1Q9C000 1473 aa10.26□□□□□ -0.77
NUP98-213ENST00000524563 UBR1Q8IWV7 1749 aa10.26□□□□□ -0.77
NUP98-213ENST00000524563 ABCC3O15438 1527 aa10.26□□□□□ -0.77
NUP98-213ENST00000524563 MED1Q15648 1581 aaPredicted RBP10.25□□□□□ -0.77
NUP98-213ENST00000524563 WASHC2CQ9Y4E1 1318 aa10.25□□□□□ -0.77
NUP98-213ENST00000524563 PTPN23Q9H3S7 1636 aa10.24□□□□□ -0.77
NUP98-213ENST00000524563 STRCP1A6NGW2 1772 aa10.24□□□□□ -0.77
NUP98-213ENST00000524563 MROH1Q8NDA8 1641 aa10.23□□□□□ -0.77
NUP98-213ENST00000524563 TSPY4P0CV99 314 aa10.23□□□□□ -0.77
NUP98-213ENST00000524563 TSPY10P0CW01 314 aa10.23□□□□□ -0.77
NUP98-213ENST00000524563 KANK4Q5T7N3 995 aaPredicted RBP10.23□□□□□ -0.77
NUP98-213ENST00000524563 ERVK-7P63135 1459 aa10.23□□□□□ -0.77
NUP98-213ENST00000524563 DUOX2Q9NRD8 1548 aa10.23□□□□□ -0.77
NUP98-213ENST00000524563 VWDEQ8N2E2 1590 aa10.22□□□□□ -0.77
NUP98-213ENST00000524563 ILDR2Q71H61 639 aa10.22□□□□□ -0.77
NUP98-213ENST00000524563 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.22□□□□□ -0.77
NUP98-213ENST00000524563 NPHP4O75161 1426 aaPredicted RBP10.22□□□□□ -0.77
NUP98-213ENST00000524563 SHANK2Q9UPX8 1470 aa10.22□□□□□ -0.77
NUP98-213ENST00000524563 PRDM15P57071 1507 aaPredicted RBP10.22□□□□□ -0.77
NUP98-213ENST00000524563 PIP4K2BP78356 416 aa10.21□□□□□ -0.77
NUP98-213ENST00000524563 MYOM3Q5VTT5 1437 aa10.21□□□□□ -0.78
NUP98-213ENST00000524563 PIK3C2BO00750 1634 aa10.2□□□□□ -0.78
NUP98-213ENST00000524563 SOCS7O14512 581 aa10.2□□□□□ -0.78
NUP98-213ENST00000524563 RSPH4AQ5TD94 716 aa10.2□□□□□ -0.78
NUP98-213ENST00000524563 FBXO31Q5XUX0 539 aaPredicted RBP10.2□□□□□ -0.78
NUP98-213ENST00000524563 MYO5BQ9ULV0 1848 aa10.19□□□□□ -0.78
NUP98-213ENST00000524563 MIA2Q96PC5 1412 aa10.19□□□□□ -0.78
NUP98-213ENST00000524563 ANKLE2Q86XL3 938 aa10.19□□□□□ -0.78
NUP98-213ENST00000524563 SENP3Q9H4L4 574 aaPredicted RBP10.18□□□□□ -0.78
NUP98-213ENST00000524563 XIRP1Q702N8 1843 aaKnown RBP10.18□□□□□ -0.78
NUP98-213ENST00000524563 SCAF11Q99590 1463 aaKnown RBP10.17□□□□□ -0.78
NUP98-213ENST00000524563 TOM1O60784 492 aa10.17□□□□□ -0.78
NUP98-213ENST00000524563 APLP2Q06481 763 aa10.17□□□□□ -0.78
NUP98-213ENST00000524563 THEMISQ8N1K5 641 aaPredicted RBP10.17□□□□□ -0.78
NUP98-213ENST00000524563 MED14O60244 1454 aa10.17□□□□□ -0.78
NUP98-213ENST00000524563 ERBINQ96RT1 1412 aa10.16□□□□□ -0.78
NUP98-213ENST00000524563 KIF15Q9NS87 1388 aa10.16□□□□□ -0.78
NUP98-213ENST00000524563 GCC2Q8IWJ2 1684 aa10.16□□□□□ -0.78
NUP98-213ENST00000524563 KDM5AP29375 1690 aaKnown RBP10.15□□□□□ -0.78
NUP98-213ENST00000524563 KANK1Q14678 1352 aa10.15□□□□□ -0.78
NUP98-213ENST00000524563 HSPA1LP34931 641 aa10.14□□□□□ -0.79
NUP98-213ENST00000524563 FGD6Q6ZV73 1430 aa10.14□□□□□ -0.79
NUP98-213ENST00000524563 STAG3Q9UJ98 1225 aa10.13□□□□□ -0.79
NUP98-213ENST00000524563 DAPK1P53355 1430 aa10.13□□□□□ -0.79
NUP98-213ENST00000524563 ADGRB3O60242 1522 aa10.12□□□□□ -0.79
NUP98-213ENST00000524563 EFCAB6Q5THR3 1501 aa10.12□□□□□ -0.79
NUP98-213ENST00000524563 LRRC7Q96NW7 1537 aa10.12□□□□□ -0.79
NUP98-213ENST00000524563 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.12□□□□□ -0.79
NUP98-213ENST00000524563 SLIT1O75093 1534 aa10.12□□□□□ -0.79
NUP98-213ENST00000524563 ALKQ9UM73 1620 aa10.11□□□□□ -0.79
NUP98-213ENST00000524563 TET3O43151 1660 aa10.11□□□□□ -0.79
NUP98-213ENST00000524563 ROBO1Q9Y6N7 1651 aa10.09□□□□□ -0.79
NUP98-213ENST00000524563 ABCC5O15440 1437 aa10.09□□□□□ -0.79
NUP98-213ENST00000524563 RRP7BPQ9NSQ0 103 aa10.09□□□□□ -0.79
NUP98-213ENST00000524563 EID1Q9Y6B2 187 aa10.09□□□□□ -0.79
NUP98-213ENST00000524563 SETD1AO15047 1707 aaKnown RBP10.09□□□□□ -0.79
NUP98-213ENST00000524563 PHLPP1O60346 1717 aa10.09□□□□□ -0.79
NUP98-213ENST00000524563 ANKRD30AQ9BXX3 1397 aa10.09□□□□□ -0.79
NUP98-213ENST00000524563 ARHGAP23Q9P227 1491 aa10.09□□□□□ -0.79
NUP98-213ENST00000524563 ARHGAP31Q2M1Z3 1444 aa10.08□□□□□ -0.8
NUP98-213ENST00000524563 NWD1Q149M9 1564 aa10.07□□□□□ -0.8
NUP98-213ENST00000524563 LMTK2Q8IWU2 1503 aa10.07□□□□□ -0.8
NUP98-213ENST00000524563 UNC13BO14795 1591 aa10.06□□□□□ -0.8
NUP98-213ENST00000524563 CHD2O14647 1828 aaKnown RBP10.06□□□□□ -0.8
NUP98-213ENST00000524563 TXNDC2Q86VQ3 553 aa10.06□□□□□ -0.8
NUP98-213ENST00000524563 PPARGC1BQ86YN6 1023 aaKnown RBP10.06□□□□□ -0.8
NUP98-213ENST00000524563 BCANQ96GW7 911 aa10.06□□□□□ -0.8
NUP98-213ENST00000524563 NKTRP30414 1462 aaKnown RBP10.05□□□□□ -0.8
NUP98-213ENST00000524563 CHIC2Q9UKJ5 165 aa10.05□□□□□ -0.8
NUP98-213ENST00000524563 TMEM2Q9UHN6 1383 aa10.04□□□□□ -0.8
NUP98-213ENST00000524563 E9PCH4 1651 aa10.04□□□□□ -0.8
NUP98-213ENST00000524563 FAM50AQ14320 339 aaKnown RBP10.04□□□□□ -0.8
NUP98-213ENST00000524563 ADGRL2O95490 1459 aa10.04□□□□□ -0.8
NUP98-213ENST00000524563 SPHKAPQ2M3C7 1700 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms