RNA–Protein interactions for RNA: ENST00000524509.1

PACSIN3-202, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 554 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-202ENST00000524509 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.83■■□□□ 1.88
PACSIN3-202ENST00000524509 RTEL1-TNFRSF6BF6WH68 1400 aa26.82■■□□□ 1.88
PACSIN3-202ENST00000524509 PKD2Q13563 968 aa26.82■■□□□ 1.88
PACSIN3-202ENST00000524509 FAM50AQ14320 339 aaKnown RBP26.82■■□□□ 1.88
PACSIN3-202ENST00000524509 PLXNC1O60486 1568 aa26.82■■□□□ 1.88
PACSIN3-202ENST00000524509 MYO3AQ8NEV4 1616 aa26.82■■□□□ 1.88
PACSIN3-202ENST00000524509 CLTCQ00610 1675 aaKnown RBP26.82■■□□□ 1.88
PACSIN3-202ENST00000524509 ATP7AQ04656 1500 aa26.81■■□□□ 1.88
PACSIN3-202ENST00000524509 UBAP1LF5GYI3 381 aa26.79■■□□□ 1.88
PACSIN3-202ENST00000524509 PTPRKQ15262 1439 aa26.79■■□□□ 1.88
PACSIN3-202ENST00000524509 INO80Q9ULG1 1556 aaPredicted RBP26.79■■□□□ 1.88
PACSIN3-202ENST00000524509 CEP170BQ9Y4F5 1589 aaPredicted RBP26.79■■□□□ 1.88
PACSIN3-202ENST00000524509 A2MP01023 1474 aa26.78■■□□□ 1.88
PACSIN3-202ENST00000524509 PPP6R1Q9UPN7 881 aa26.74■■□□□ 1.87
PACSIN3-202ENST00000524509 RRBP1Q9P2E9 1410 aaKnown RBP26.73■■□□□ 1.87
PACSIN3-202ENST00000524509 SHANK2Q9UPX8 1470 aa26.71■■□□□ 1.87
PACSIN3-202ENST00000524509 GGT6Q6P531 493 aa26.71■■□□□ 1.87
PACSIN3-202ENST00000524509 DAPK1P53355 1430 aa26.71■■□□□ 1.87
PACSIN3-202ENST00000524509 ABCC5O15440 1437 aa26.7■■□□□ 1.86
PACSIN3-202ENST00000524509 ADGBQ8N7X0 1667 aa26.69■■□□□ 1.86
PACSIN3-202ENST00000524509 MAST1Q9Y2H9 1570 aa26.67■■□□□ 1.86
PACSIN3-202ENST00000524509 DNMT1P26358 1616 aaKnown RBP26.66■■□□□ 1.86
PACSIN3-202ENST00000524509 A2ML1A8K2U0 1454 aa26.66■■□□□ 1.86
PACSIN3-202ENST00000524509 ANKRD30AQ9BXX3 1397 aa26.65■■□□□ 1.86
PACSIN3-202ENST00000524509 DHX29Q7Z478 1369 aaKnown RBP26.62■■□□□ 1.85
PACSIN3-202ENST00000524509 CPS1P31327 1500 aa26.58■■□□□ 1.85
PACSIN3-202ENST00000524509 POLR1AO95602 1720 aaPredicted RBP26.57■■□□□ 1.84
PACSIN3-202ENST00000524509 CHIC2Q9UKJ5 165 aa26.57■■□□□ 1.84
PACSIN3-202ENST00000524509 ROCK1Q13464 1354 aa26.56■■□□□ 1.84
PACSIN3-202ENST00000524509 KIF15Q9NS87 1388 aa26.56■■□□□ 1.84
PACSIN3-202ENST00000524509 ADGRL2O95490 1459 aa26.55■■□□□ 1.84
PACSIN3-202ENST00000524509 TOM1O60784 492 aa26.55■■□□□ 1.84
PACSIN3-202ENST00000524509 NEURL4Q96JN8 1562 aa26.54■■□□□ 1.84
PACSIN3-202ENST00000524509 HSPA1LP34931 641 aa26.54■■□□□ 1.84
PACSIN3-202ENST00000524509 ITGAEP38570 1179 aa26.54■■□□□ 1.84
PACSIN3-202ENST00000524509 RRP7BPQ9NSQ0 103 aa26.54■■□□□ 1.84
PACSIN3-202ENST00000524509 MED1Q15648 1581 aaPredicted RBP26.54■■□□□ 1.84
PACSIN3-202ENST00000524509 CROCC2H7BZ55 1655 aa26.54■■□□□ 1.84
PACSIN3-202ENST00000524509 TNRQ92752 1358 aa26.53■■□□□ 1.84
PACSIN3-202ENST00000524509 DUOX2Q9NRD8 1548 aa26.53■■□□□ 1.84
PACSIN3-202ENST00000524509 FAM135AQ9P2D6 1515 aa26.52■■□□□ 1.84
PACSIN3-202ENST00000524509 SCAF1Q9H7N4 1312 aaKnown RBP26.51■■□□□ 1.83
PACSIN3-202ENST00000524509 PZPP20742 1482 aa26.5■■□□□ 1.83
PACSIN3-202ENST00000524509 PIP4K2BP78356 416 aa26.5■■□□□ 1.83
PACSIN3-202ENST00000524509 FBXO31Q5XUX0 539 aaPredicted RBP26.49■■□□□ 1.83
PACSIN3-202ENST00000524509 ERBINQ96RT1 1412 aa26.48■■□□□ 1.83
PACSIN3-202ENST00000524509 KIF3BO15066 747 aa26.48■■□□□ 1.83
PACSIN3-202ENST00000524509 KDM5DQ9BY66 1539 aa26.48■■□□□ 1.83
PACSIN3-202ENST00000524509 ANKLE2Q86XL3 938 aa26.46■■□□□ 1.83
PACSIN3-202ENST00000524509 VWDEQ8N2E2 1590 aa26.44■■□□□ 1.82
PACSIN3-202ENST00000524509 THEMISQ8N1K5 641 aaPredicted RBP26.43■■□□□ 1.82
PACSIN3-202ENST00000524509 NLRP1Q9C000 1473 aa26.42■■□□□ 1.82
PACSIN3-202ENST00000524509 WASHC2CQ9Y4E1 1318 aa26.42■■□□□ 1.82
PACSIN3-202ENST00000524509 MED14O60244 1454 aa26.42■■□□□ 1.82
PACSIN3-202ENST00000524509 ANKRD50Q9ULJ7 1429 aa26.41■■□□□ 1.82
PACSIN3-202ENST00000524509 DEPDC5O75140 1603 aa26.41■■□□□ 1.82
PACSIN3-202ENST00000524509 EIF2AK4Q9P2K8 1649 aaKnown RBP26.39■■□□□ 1.82
PACSIN3-202ENST00000524509 UGGT1Q9NYU2 1555 aa26.39■■□□□ 1.82
PACSIN3-202ENST00000524509 NPHP4O75161 1426 aaPredicted RBP26.39■■□□□ 1.81
PACSIN3-202ENST00000524509 ACIN1Q9UKV3 1341 aaKnown RBP26.39■■□□□ 1.81
PACSIN3-202ENST00000524509 ALKQ9UM73 1620 aa26.38■■□□□ 1.81
PACSIN3-202ENST00000524509 KANK1Q14678 1352 aa26.36■■□□□ 1.81
PACSIN3-202ENST00000524509 IQGAP1P46940 1657 aa26.34■■□□□ 1.81
PACSIN3-202ENST00000524509 PHF23Q9BUL5 403 aaPredicted RBP26.32■■□□□ 1.8
PACSIN3-202ENST00000524509 HFM1A2PYH4 1435 aa26.31■■□□□ 1.8
PACSIN3-202ENST00000524509 RNF17Q9BXT8 1623 aaKnown RBP26.28■■□□□ 1.8
PACSIN3-202ENST00000524509 NAIPQ13075 1403 aa26.27■■□□□ 1.8
PACSIN3-202ENST00000524509 LRRC7Q96NW7 1537 aa26.27■■□□□ 1.8
PACSIN3-202ENST00000524509 STRCP1A6NGW2 1772 aa26.27■■□□□ 1.8
PACSIN3-202ENST00000524509 SYNMO15061 1565 aa26.26■■□□□ 1.79
PACSIN3-202ENST00000524509 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.26■■□□□ 1.792e-10■□□□□ 10.5
PACSIN3-202ENST00000524509 ZC3H13Q5T200 1668 aaKnown RBP26.25■■□□□ 1.79
PACSIN3-202ENST00000524509 TRIM26Q12899 539 aaPredicted RBP26.23■■□□□ 1.79
PACSIN3-202ENST00000524509 ABCC3O15438 1527 aa26.23■■□□□ 1.79
PACSIN3-202ENST00000524509 PRDM15P57071 1507 aaPredicted RBP26.21■■□□□ 1.79
PACSIN3-202ENST00000524509 ERVK-7P63135 1459 aa26.2■■□□□ 1.78
PACSIN3-202ENST00000524509 SETD5Q9C0A6 1442 aa26.17■■□□□ 1.78
PACSIN3-202ENST00000524509 GCC2Q8IWJ2 1684 aa26.16■■□□□ 1.78
PACSIN3-202ENST00000524509 NUP155O75694 1391 aa26.16■■□□□ 1.78
PACSIN3-202ENST00000524509 UBR1Q8IWV7 1749 aa26.16■■□□□ 1.78
PACSIN3-202ENST00000524509 HRCP23327 699 aa26.15■■□□□ 1.78
PACSIN3-202ENST00000524509 MROH1Q8NDA8 1641 aa26.14■■□□□ 1.77
PACSIN3-202ENST00000524509 LMTK2Q8IWU2 1503 aa26.14■■□□□ 1.77
PACSIN3-202ENST00000524509 SCAF11Q99590 1463 aaKnown RBP26.13■■□□□ 1.77
PACSIN3-202ENST00000524509 SENP3Q9H4L4 574 aaPredicted RBP26.13■■□□□ 1.77
PACSIN3-202ENST00000524509 ARHGAP31Q2M1Z3 1444 aa26.13■■□□□ 1.77
PACSIN3-202ENST00000524509 TRIM52Q96A61 297 aa26.12■■□□□ 1.77
PACSIN3-202ENST00000524509 UNC13BO14795 1591 aa26.12■■□□□ 1.77
PACSIN3-202ENST00000524509 ARHGAP23Q9P227 1491 aa26.1■■□□□ 1.77
PACSIN3-202ENST00000524509 SLIT1O75093 1534 aa26.09■■□□□ 1.77
PACSIN3-202ENST00000524509 CEP152O94986 1710 aa26.09■■□□□ 1.77
PACSIN3-202ENST00000524509 CFAP65Q6ZU64 1925 aaKnown RBP26.09■■□□□ 1.77
PACSIN3-202ENST00000524509 RGS17Q9UGC6 210 aaPredicted RBP26.07■■□□□ 1.76
PACSIN3-202ENST00000524509 XIRP1Q702N8 1843 aaKnown RBP26.07■■□□□ 1.76
PACSIN3-202ENST00000524509 LTKP29376 864 aa26.06■■□□□ 1.76
PACSIN3-202ENST00000524509 RPRD2Q5VT52 1461 aaKnown RBP26.05■■□□□ 1.76
PACSIN3-202ENST00000524509 TXNDC2Q86VQ3 553 aa26.05■■□□□ 1.76
PACSIN3-202ENST00000524509 RAB3GAP2Q9H2M9 1393 aa26.03■■□□□ 1.76
PACSIN3-202ENST00000524509 IQGAP3Q86VI3 1631 aa26.02■■□□□ 1.76
PACSIN3-202ENST00000524509 FAM135BQ49AJ0 1406 aa26.01■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms