RNA–Protein interactions for RNA: ENST00000524465.5

GEN1-203, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

TSL 4

Gene GEN1, Length 593 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-203ENST00000524465 PDIA6Q15084 440 aa9.01□□□□□ -0.97
GEN1-203ENST00000524465 PRKCSHP14314 528 aaPredicted RBP9□□□□□ -0.97
GEN1-203ENST00000524465 EPAS1Q99814 870 aa9□□□□□ -0.97
GEN1-203ENST00000524465 VPS9D1Q9Y2B5 631 aa9□□□□□ -0.97
GEN1-203ENST00000524465 ZBED2Q9BTP6 218 aa8.98□□□□□ -0.97
GEN1-203ENST00000524465 PPP1R3GB7ZBB8 358 aa8.97□□□□□ -0.97
GEN1-203ENST00000524465 STAC3Q96MF2 364 aa8.97□□□□□ -0.97
GEN1-203ENST00000524465 TSHZ2Q9NRE2 1034 aa8.95□□□□□ -0.98
GEN1-203ENST00000524465 BHMG1C9JSJ3 638 aaPredicted RBP8.93□□□□□ -0.98
GEN1-203ENST00000524465 DDX12PQ92771 950 aa8.93□□□□□ -0.98
GEN1-203ENST00000524465 HCSTQ9UBK5 93 aa8.93□□□□□ -0.98
GEN1-203ENST00000524465 C6orf132Q5T0Z8 1188 aa8.92□□□□□ -0.98
GEN1-203ENST00000524465 COL9A1P20849 921 aa8.91□□□□□ -0.98
GEN1-203ENST00000524465 NBPF3Q9H094 633 aa8.91□□□□□ -0.98
GEN1-203ENST00000524465 ONECUT3O60422 494 aaPredicted RBP8.9□□□□□ -0.98
GEN1-203ENST00000524465 EN1Q05925 392 aaPredicted RBP8.9□□□□□ -0.98
GEN1-203ENST00000524465 NBR1Q14596 966 aa8.9□□□□□ -0.98
GEN1-203ENST00000524465 RABGEF1Q9UJ41 708 aa8.9□□□□□ -0.98
GEN1-203ENST00000524465 TPRNQ4KMQ1 711 aa8.89□□□□□ -0.99
GEN1-203ENST00000524465 MRPL50Q8N5N7 158 aaKnown RBP8.89□□□□□ -0.99
GEN1-203ENST00000524465 ARHGEF1Q92888 912 aaKnown RBP8.88□□□□□ -0.99
GEN1-203ENST00000524465 KCTD12Q96CX2 325 aaKnown RBP8.88□□□□□ -0.99
GEN1-203ENST00000524465 PROX2Q3B8N5 592 aa8.87□□□□□ -0.99
GEN1-203ENST00000524465 RBM33Q96EV2 1170 aaKnown RBP8.87□□□□□ -0.99
GEN1-203ENST00000524465 GOLGA8CPA6NN73 597 aa8.86□□□□□ -0.99
GEN1-203ENST00000524465 MAP3K7O43318 606 aa8.86□□□□□ -0.99
GEN1-203ENST00000524465 TRIM6-TRIM34B2RNG4 842 aa8.84□□□□□ -0.99
GEN1-203ENST00000524465 LAPTM4BQ86VI4 370 aa8.84□□□□□ -0.99
GEN1-203ENST00000524465 CERKQ8TCT0 537 aa8.84□□□□□ -0.99
GEN1-203ENST00000524465 GRXCR2A6NFK2 248 aa8.83□□□□□ -1
GEN1-203ENST00000524465 TSR1Q2NL82 804 aaKnown RBP8.83□□□□□ -1
GEN1-203ENST00000524465 P3H3Q8IVL6 736 aa8.83□□□□□ -1
GEN1-203ENST00000524465 KCNV2Q8TDN2 545 aa8.83□□□□□ -1
GEN1-203ENST00000524465 WNT2BQ93097 391 aa8.83□□□□□ -1
GEN1-203ENST00000524465 OSBPP22059 807 aa8.82□□□□□ -1
GEN1-203ENST00000524465 THSD4Q6ZMP0 1018 aa8.82□□□□□ -1
GEN1-203ENST00000524465 KIAA1468Q9P260 1216 aa8.82□□□□□ -1
GEN1-203ENST00000524465 KDM2AQ9Y2K7 1162 aa8.82□□□□□ -1
GEN1-203ENST00000524465 PRIM1P49642 420 aaKnown RBP8.8□□□□□ -1
GEN1-203ENST00000524465 ANKK1Q8NFD2 765 aa8.79□□□□□ -1
GEN1-203ENST00000524465 PACS2Q86VP3 889 aa8.78□□□□□ -1
GEN1-203ENST00000524465 PTPN5P54829 565 aa8.77□□□□□ -1.01
GEN1-203ENST00000524465 PRSS12P56730 875 aa8.77□□□□□ -1.01
GEN1-203ENST00000524465 FAM98CQ17RN3 349 aaKnown RBP8.77□□□□□ -1.01
GEN1-203ENST00000524465 CDCA7LQ96GN5 454 aa8.77□□□□□ -1.01
GEN1-203ENST00000524465 PLA2G2EQ9NZK7 142 aa8.77□□□□□ -1.01
GEN1-203ENST00000524465 RBM27Q9P2N5 1060 aaKnown RBP8.77□□□□□ -1.01
GEN1-203ENST00000524465 TSKSQ9UJT2 592 aa8.77□□□□□ -1.01
GEN1-203ENST00000524465 ZFRQ96KR1 1074 aaKnown RBP8.76□□□□□ -1.01
GEN1-203ENST00000524465 SOWAHBA6NEL2 793 aa8.75□□□□□ -1.01
GEN1-203ENST00000524465 SEPT9Q9UHD8 586 aaPredicted RBP8.75□□□□□ -1.01
GEN1-203ENST00000524465 MLLT3P42568 568 aaPredicted RBP8.73□□□□□ -1.01
GEN1-203ENST00000524465 NYAP1Q6ZVC0 841 aa8.73□□□□□ -1.01
GEN1-203ENST00000524465 CDHR5Q9HBB8 845 aa8.73□□□□□ -1.01
GEN1-203ENST00000524465 NBPF26B4DH59 902 aa8.72□□□□□ -1.01
GEN1-203ENST00000524465 NPDC1Q9NQX5 325 aaPredicted RBP8.71□□□□□ -1.02
GEN1-203ENST00000524465 FAM198AQ9UFP1 575 aa8.71□□□□□ -1.02
GEN1-203ENST00000524465 BCAMP50895 628 aa8.7□□□□□ -1.02
GEN1-203ENST00000524465 IFFO2Q5TF58 517 aa8.7□□□□□ -1.02
GEN1-203ENST00000524465 TTC13Q8NBP0 860 aa8.7□□□□□ -1.02
GEN1-203ENST00000524465 LRCH3Q96II8 777 aa8.7□□□□□ -1.02
GEN1-203ENST00000524465 TATDN2Q93075 761 aa8.69□□□□□ -1.02
GEN1-203ENST00000524465 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.69□□□□□ -1.02
GEN1-203ENST00000524465 TSR3Q9UJK0 312 aaKnown RBP8.67□□□□□ -1.02
GEN1-203ENST00000524465 PNMA3Q9UL41 463 aa8.67□□□□□ -1.02
GEN1-203ENST00000524465 SEMA3EO15041 775 aa8.66□□□□□ -1.02
GEN1-203ENST00000524465 SMAPO00193 183 aa8.65□□□□□ -1.02
GEN1-203ENST00000524465 PTGDRQ13258 359 aa8.65□□□□□ -1.02
GEN1-203ENST00000524465 PADI6Q6TGC4 694 aa8.65□□□□□ -1.02
GEN1-203ENST00000524465 NUDT18Q6ZVK8 323 aa8.65□□□□□ -1.02
GEN1-203ENST00000524465 WBP1LQ9NX94 342 aa8.65□□□□□ -1.02
GEN1-203ENST00000524465 C3orf80F5H4A9 247 aa8.64□□□□□ -1.03
GEN1-203ENST00000524465 ITGBL1O95965 494 aaPredicted RBP8.64□□□□□ -1.03
GEN1-203ENST00000524465 HPS5Q9UPZ3 1129 aa8.64□□□□□ -1.03
GEN1-203ENST00000524465 TESPA1A2RU30 521 aaPredicted RBP8.63□□□□□ -1.03
GEN1-203ENST00000524465 SAMD7Q7Z3H4 446 aa8.63□□□□□ -1.03
GEN1-203ENST00000524465 HDGFP51858 240 aaKnown RBP8.62□□□□□ -1.03
GEN1-203ENST00000524465 SMYD5Q6GMV2 418 aa8.62□□□□□ -1.03
GEN1-203ENST00000524465 NUTM2FA1L443 756 aa8.61□□□□□ -1.03
GEN1-203ENST00000524465 PPP4CP60510 307 aa8.61□□□□□ -1.03
GEN1-203ENST00000524465 FCHSD2O94868 740 aa8.6□□□□□ -1.03
GEN1-203ENST00000524465 EYA1Q99502 592 aa8.6□□□□□ -1.03
GEN1-203ENST00000524465 RGS20O76081 388 aa8.59□□□□□ -1.03
GEN1-203ENST00000524465 NECTIN2Q92692 538 aa8.59□□□□□ -1.03
GEN1-203ENST00000524465 A0A0G2JS52 829 aa8.57□□□□□ -1.04
GEN1-203ENST00000524465 SLF2Q8IX21 1173 aa8.57□□□□□ -1.04
GEN1-203ENST00000524465 SLC4A3P48751 1232 aa8.56□□□□□ -1.04
GEN1-203ENST00000524465 RBM46Q8TBY0 533 aaKnown RBP8.56□□□□□ -1.04
GEN1-203ENST00000524465 ADGRG1Q9Y653 693 aa8.56□□□□□ -1.04
GEN1-203ENST00000524465 KCNC4Q03721 635 aa8.55□□□□□ -1.04
GEN1-203ENST00000524465 HIC1Q14526 733 aa8.55□□□□□ -1.04
GEN1-203ENST00000524465 DNAJB2P25686 324 aa8.54□□□□□ -1.04
GEN1-203ENST00000524465 SWT1Q5T5J6 900 aaKnown RBP8.54□□□□□ -1.04
GEN1-203ENST00000524465 RNF40O75150 1001 aa8.53□□□□□ -1.04
GEN1-203ENST00000524465 RBM26Q5T8P6 1007 aaKnown RBP8.53□□□□□ -1.04
GEN1-203ENST00000524465 ERICH6Q7L0X2 663 aa8.52□□□□□ -1.05
GEN1-203ENST00000524465 OATP04181 439 aa8.51□□□□□ -1.05
GEN1-203ENST00000524465 TMEM134Q9H6X4 195 aa8.51□□□□□ -1.05
GEN1-203ENST00000524465 TIMELESSQ9UNS1 1208 aa8.51□□□□□ -1.05
GEN1-203ENST00000524465 TULP1O00294 542 aaPredicted RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms