RNA–Protein interactions for RNA: ENST00000524384.5

PTP4A2-208, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 5

Gene PTP4A2, Length 663 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-208ENST00000524384 PIP4K2BP78356 416 aa13.96□□□□□ -0.17
PTP4A2-208ENST00000524384 MYT1LQ9UL68 1186 aa13.96□□□□□ -0.17
PTP4A2-208ENST00000524384 CDK13Q14004 1512 aaKnown RBP13.95□□□□□ -0.18
PTP4A2-208ENST00000524384 PLA2R1Q13018 1463 aa13.95□□□□□ -0.18
PTP4A2-208ENST00000524384 RANGAP1P46060 587 aaPredicted RBP13.94□□□□□ -0.18
PTP4A2-208ENST00000524384 PKD2Q13563 968 aa13.94□□□□□ -0.18
PTP4A2-208ENST00000524384 TCOF1Q13428 1488 aaKnown RBP13.93□□□□□ -0.18
PTP4A2-208ENST00000524384 TOM1O60784 492 aa13.93□□□□□ -0.18
PTP4A2-208ENST00000524384 MLH3Q9UHC1 1453 aa13.93□□□□□ -0.18
PTP4A2-208ENST00000524384 ZNF142P52746 1687 aaPredicted RBP13.92□□□□□ -0.18
PTP4A2-208ENST00000524384 MROH2AA6NES4 1674 aa13.91□□□□□ -0.18
PTP4A2-208ENST00000524384 ARHGAP5Q13017 1502 aa13.9□□□□□ -0.18
PTP4A2-208ENST00000524384 SUPT6HQ7KZ85 1726 aaKnown RBP13.9□□□□□ -0.18
PTP4A2-208ENST00000524384 C19orf67A6NJJ6 358 aa13.9□□□□□ -0.18
PTP4A2-208ENST00000524384 MYO3AQ8NEV4 1616 aa13.9□□□□□ -0.19
PTP4A2-208ENST00000524384 CEP170BQ9Y4F5 1589 aaPredicted RBP13.88□□□□□ -0.19
PTP4A2-208ENST00000524384 ZMYM3Q14202 1370 aa13.88□□□□□ -0.19
PTP4A2-208ENST00000524384 KIF14Q15058 1648 aa13.88□□□□□ -0.19
PTP4A2-208ENST00000524384 CPS1P31327 1500 aa13.88□□□□□ -0.19
PTP4A2-208ENST00000524384 KIDINS220Q9ULH0 1771 aa13.84□□□□□ -0.19
PTP4A2-208ENST00000524384 ALKQ9UM73 1620 aa13.83□□□□□ -0.2
PTP4A2-208ENST00000524384 PTPRKQ15262 1439 aa13.83□□□□□ -0.2
PTP4A2-208ENST00000524384 SHANK2Q9UPX8 1470 aa13.83□□□□□ -0.2
PTP4A2-208ENST00000524384 ABCC1P33527 1531 aa13.82□□□□□ -0.2
PTP4A2-208ENST00000524384 CDC42BPBQ9Y5S2 1711 aa13.81□□□□□ -0.2
PTP4A2-208ENST00000524384 RGS17Q9UGC6 210 aaPredicted RBP13.81□□□□□ -0.2
PTP4A2-208ENST00000524384 CDK11AQ9UQ88 783 aaPredicted RBP13.81□□□□□ -0.2
PTP4A2-208ENST00000524384 CLTCQ00610 1675 aaKnown RBP13.81□□□□□ -0.2
PTP4A2-208ENST00000524384 ITSN2Q9NZM3 1697 aa13.81□□□□□ -0.2
PTP4A2-208ENST00000524384 TROQ12816 1431 aaPredicted RBP13.8□□□□□ -0.2
PTP4A2-208ENST00000524384 NEURL4Q96JN8 1562 aa13.79□□□□□ -0.2
PTP4A2-208ENST00000524384 POLR1AO95602 1720 aaPredicted RBP13.78□□□□□ -0.2
PTP4A2-208ENST00000524384 ATP1B4Q9UN42 357 aaPredicted RBP13.78□□□□□ -0.2
PTP4A2-208ENST00000524384 CLIP1P30622 1438 aa13.78□□□□□ -0.2
PTP4A2-208ENST00000524384 A2ML1A8K2U0 1454 aa13.78□□□□□ -0.2
PTP4A2-208ENST00000524384 DNMT1P26358 1616 aaKnown RBP13.78□□□□□ -0.2
PTP4A2-208ENST00000524384 SPDYE4A6NLX3 237 aa13.77□□□□□ -0.21
PTP4A2-208ENST00000524384 PREX2Q70Z35 1606 aa13.77□□□□□ -0.21
PTP4A2-208ENST00000524384 VWDEQ8N2E2 1590 aa13.76□□□□□ -0.21
PTP4A2-208ENST00000524384 FARP1Q9Y4F1 1045 aaPredicted RBP13.76□□□□□ -0.21
PTP4A2-208ENST00000524384 SAMD9LQ8IVG5 1584 aa13.75□□□□□ -0.21
PTP4A2-208ENST00000524384 GABBR2O75899 941 aa13.74□□□□□ -0.21
PTP4A2-208ENST00000524384 FMN1Q68DA7 1419 aa13.73□□□□□ -0.21
PTP4A2-208ENST00000524384 STAG3Q9UJ98 1225 aa13.73□□□□□ -0.21
PTP4A2-208ENST00000524384 PLXNC1O60486 1568 aa13.72□□□□□ -0.21
PTP4A2-208ENST00000524384 CD44P16070 742 aaKnown RBP13.72□□□□□ -0.21
PTP4A2-208ENST00000524384 RNF17Q9BXT8 1623 aaKnown RBP13.71□□□□□ -0.22
PTP4A2-208ENST00000524384 GGT6Q6P531 493 aa13.7□□□□□ -0.22
PTP4A2-208ENST00000524384 POTEAQ6S8J7 498 aa13.7□□□□□ -0.22
PTP4A2-208ENST00000524384 SPAG9O60271 1321 aaKnown RBP13.69□□□□□ -0.22
PTP4A2-208ENST00000524384 ATP7AQ04656 1500 aa13.69□□□□□ -0.22
PTP4A2-208ENST00000524384 A2MP01023 1474 aa13.68□□□□□ -0.22
PTP4A2-208ENST00000524384 LRRIQ1Q96JM4 1722 aa13.68□□□□□ -0.22
PTP4A2-208ENST00000524384 ANKLE2Q86XL3 938 aa13.68□□□□□ -0.22
PTP4A2-208ENST00000524384 LRRC7Q96NW7 1537 aa13.68□□□□□ -0.22
PTP4A2-208ENST00000524384 CDC42BPAQ5VT25 1732 aa13.67□□□□□ -0.22
PTP4A2-208ENST00000524384 NPHP4O75161 1426 aaPredicted RBP13.67□□□□□ -0.22
PTP4A2-208ENST00000524384 SYCP2Q9BX26 1530 aa13.67□□□□□ -0.22
PTP4A2-208ENST00000524384 MED14O60244 1454 aa13.67□□□□□ -0.22
PTP4A2-208ENST00000524384 SYNMO15061 1565 aa13.66□□□□□ -0.22
PTP4A2-208ENST00000524384 INO80Q9ULG1 1556 aaPredicted RBP13.66□□□□□ -0.22
PTP4A2-208ENST00000524384 STRCP1A6NGW2 1772 aa13.66□□□□□ -0.22
PTP4A2-208ENST00000524384 SETD1AO15047 1707 aaKnown RBP13.66□□□□□ -0.22
PTP4A2-208ENST00000524384 TNRQ92752 1358 aa13.66□□□□□ -0.22
PTP4A2-208ENST00000524384 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.66□□□□□ -0.221e-9■■□□□ 12.2
PTP4A2-208ENST00000524384 EEA1Q15075 1411 aa13.65□□□□□ -0.22
PTP4A2-208ENST00000524384 DEPDC5O75140 1603 aa13.65□□□□□ -0.22
PTP4A2-208ENST00000524384 IQGAP1P46940 1657 aa13.64□□□□□ -0.23
PTP4A2-208ENST00000524384 ZNF777Q9ULD5 760 aaPredicted RBP13.64□□□□□ -0.23
PTP4A2-208ENST00000524384 ARHGAP35Q9NRY4 1499 aa13.62□□□□□ -0.23
PTP4A2-208ENST00000524384 HNRNPMP52272 730 aaKnown RBP eCLIP13.62□□□□□ -0.23
PTP4A2-208ENST00000524384 FBXO31Q5XUX0 539 aaPredicted RBP13.62□□□□□ -0.23
PTP4A2-208ENST00000524384 THEMISQ8N1K5 641 aaPredicted RBP13.62□□□□□ -0.23
PTP4A2-208ENST00000524384 ADGBQ8N7X0 1667 aa13.61□□□□□ -0.23
PTP4A2-208ENST00000524384 CREBZFQ9NS37 354 aa13.61□□□□□ -0.23
PTP4A2-208ENST00000524384 PZPP20742 1482 aa13.61□□□□□ -0.23
PTP4A2-208ENST00000524384 UGGT1Q9NYU2 1555 aa13.6□□□□□ -0.23
PTP4A2-208ENST00000524384 FAM135AQ9P2D6 1515 aa13.59□□□□□ -0.23
PTP4A2-208ENST00000524384 KIAA1107Q9UPP5 1409 aa13.59□□□□□ -0.23
PTP4A2-208ENST00000524384 NLRP1Q9C000 1473 aa13.59□□□□□ -0.23
PTP4A2-208ENST00000524384 CCDC18Q5T9S5 1454 aa13.57□□□□□ -0.24
PTP4A2-208ENST00000524384 PLEKHH2Q8IVE3 1493 aa13.57□□□□□ -0.24
PTP4A2-208ENST00000524384 FAM135BQ49AJ0 1406 aa13.56□□□□□ -0.24
PTP4A2-208ENST00000524384 MIA2Q96PC5 1412 aa13.56□□□□□ -0.24
PTP4A2-208ENST00000524384 GPATCH8Q9UKJ3 1502 aaKnown RBP13.56□□□□□ -0.24
PTP4A2-208ENST00000524384 KDM5DQ9BY66 1539 aa13.55□□□□□ -0.24
PTP4A2-208ENST00000524384 UPF1Q92900 1129 aaKnown RBP eCLIP13.55□□□□□ -0.247e-10■□□□□ 8.5
PTP4A2-208ENST00000524384 XIRP1Q702N8 1843 aaKnown RBP13.55□□□□□ -0.24
PTP4A2-208ENST00000524384 ZC3H13Q5T200 1668 aaKnown RBP13.54□□□□□ -0.24
PTP4A2-208ENST00000524384 ZRANB1Q9UGI0 708 aa13.53□□□□□ -0.24
PTP4A2-208ENST00000524384 CASKIN1Q8WXD9 1431 aa13.52□□□□□ -0.25
PTP4A2-208ENST00000524384 DHX29Q7Z478 1369 aaKnown RBP13.51□□□□□ -0.25
PTP4A2-208ENST00000524384 WASHC2CQ9Y4E1 1318 aa13.51□□□□□ -0.25
PTP4A2-208ENST00000524384 UBTFP17480 764 aaKnown RBP13.51□□□□□ -0.25
PTP4A2-208ENST00000524384 CLCN6P51797 869 aa13.51□□□□□ -0.25
PTP4A2-208ENST00000524384 CFDP1Q9UEE9 299 aaPredicted RBP13.51□□□□□ -0.25
PTP4A2-208ENST00000524384 KIF3BO15066 747 aa13.5□□□□□ -0.25
PTP4A2-208ENST00000524384 ROBO1Q9Y6N7 1651 aa13.5□□□□□ -0.25
PTP4A2-208ENST00000524384 RTEL1-TNFRSF6BF6WH68 1400 aa13.48□□□□□ -0.25
PTP4A2-208ENST00000524384 SRCAPQ6ZRS2 3230 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms