RNA–Protein interactions for RNA: ENST00000524306.1

CLINT1-208, Transcript of clathrin interactor 1, humanhuman

TSL 1 (best)

Gene CLINT1, Length 2,905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-208ENST00000524306 ARHGAP5Q13017 1502 aa7.63□□□□□ -1.19
CLINT1-208ENST00000524306 SYCP2Q9BX26 1530 aa7.63□□□□□ -1.19
CLINT1-208ENST00000524306 NEO1Q92859 1461 aa7.63□□□□□ -1.19
CLINT1-208ENST00000524306 OSCARQ8IYS5 282 aa7.62□□□□□ -1.19
CLINT1-208ENST00000524306 SLC4A1APQ9BWU0 796 aaKnown RBP7.62□□□□□ -1.19
CLINT1-208ENST00000524306 LAMC1P11047 1609 aa7.62□□□□□ -1.19
CLINT1-208ENST00000524306 REREQ9P2R6 1566 aa7.61□□□□□ -1.19
CLINT1-208ENST00000524306 RIMBP3CA6NJZ7 1639 aa7.61□□□□□ -1.19
CLINT1-208ENST00000524306 RIMBP3BA6NNM3 1639 aa7.61□□□□□ -1.19
CLINT1-208ENST00000524306 RIMBP3Q9UFD9 1639 aa7.61□□□□□ -1.19
CLINT1-208ENST00000524306 ROCK2O75116 1388 aaKnown RBP7.6□□□□□ -1.19
CLINT1-208ENST00000524306 PRDM15P57071 1507 aaPredicted RBP7.6□□□□□ -1.19
CLINT1-208ENST00000524306 LMTK2Q8IWU2 1503 aa7.6□□□□□ -1.19
CLINT1-208ENST00000524306 ZMYM4Q5VZL5 1548 aa7.6□□□□□ -1.19
CLINT1-208ENST00000524306 CACNB1Q02641 598 aaPredicted RBP7.6□□□□□ -1.19
CLINT1-208ENST00000524306 ASXL2Q76L83 1435 aa7.59□□□□□ -1.19
CLINT1-208ENST00000524306 ERICH6BQ5W0A0 696 aa7.59□□□□□ -1.19
CLINT1-208ENST00000524306 NBPF8Q3BBV2 869 aa7.59□□□□□ -1.19
CLINT1-208ENST00000524306 ZC3H13Q5T200 1668 aaKnown RBP7.59□□□□□ -1.19
CLINT1-208ENST00000524306 KTN1Q86UP2 1357 aaKnown RBP7.59□□□□□ -1.19
CLINT1-208ENST00000524306 KIF15Q9NS87 1388 aa7.59□□□□□ -1.19
CLINT1-208ENST00000524306 TET3O43151 1660 aa7.59□□□□□ -1.2
CLINT1-208ENST00000524306 KCNH8Q96L42 1107 aa7.58□□□□□ -1.2
CLINT1-208ENST00000524306 ATP7AQ04656 1500 aa7.58□□□□□ -1.2
CLINT1-208ENST00000524306 TSPY4P0CV99 314 aa7.58□□□□□ -1.2
CLINT1-208ENST00000524306 TSPY10P0CW01 314 aa7.58□□□□□ -1.2
CLINT1-208ENST00000524306 PIAS4Q8N2W9 510 aaPredicted RBP7.58□□□□□ -1.2
CLINT1-208ENST00000524306 RICTORQ6R327 1708 aa7.58□□□□□ -1.2
CLINT1-208ENST00000524306 MLH3Q9UHC1 1453 aa7.58□□□□□ -1.2
CLINT1-208ENST00000524306 ZNF518AQ6AHZ1 1483 aa7.57□□□□□ -1.2
CLINT1-208ENST00000524306 HECW2Q9P2P5 1572 aa7.57□□□□□ -1.2
CLINT1-208ENST00000524306 KIDINS220Q9ULH0 1771 aa7.57□□□□□ -1.2
CLINT1-208ENST00000524306 FANCAO15360 1455 aa7.56□□□□□ -1.2
CLINT1-208ENST00000524306 DIP2BQ9P265 1576 aa7.56□□□□□ -1.2
CLINT1-208ENST00000524306 NUP155O75694 1391 aa7.56□□□□□ -1.2
CLINT1-208ENST00000524306 PKD2Q13563 968 aa7.56□□□□□ -1.2
CLINT1-208ENST00000524306 KIF7Q2M1P5 1343 aa7.56□□□□□ -1.2
CLINT1-208ENST00000524306 GPRASP1Q5JY77 1395 aa7.56□□□□□ -1.2
CLINT1-208ENST00000524306 MROH1Q8NDA8 1641 aa7.56□□□□□ -1.2
CLINT1-208ENST00000524306 PRKRIP1Q9H875 184 aaPredicted RBP7.55□□□□□ -1.2
CLINT1-208ENST00000524306 E9PCH4 1651 aa7.55□□□□□ -1.2
CLINT1-208ENST00000524306 PPRC1Q5VV67 1664 aaKnown RBP7.55□□□□□ -1.2
CLINT1-208ENST00000524306 DHX29Q7Z478 1369 aaKnown RBP7.55□□□□□ -1.2
CLINT1-208ENST00000524306 CEP152O94986 1710 aa7.55□□□□□ -1.2
CLINT1-208ENST00000524306 USP47Q96K76 1375 aa7.55□□□□□ -1.2
CLINT1-208ENST00000524306 ARID3CA6NKF2 412 aa7.55□□□□□ -1.2
CLINT1-208ENST00000524306 TRPM1Q7Z4N2 1603 aa7.54□□□□□ -1.2
CLINT1-208ENST00000524306 POGZQ7Z3K3 1410 aa7.54□□□□□ -1.2
CLINT1-208ENST00000524306 EFCAB2Q5VUJ9 269 aa7.54□□□□□ -1.2
CLINT1-208ENST00000524306 KIAA1210Q9ULL0 1709 aa7.54□□□□□ -1.2
CLINT1-208ENST00000524306 INSRP06213 1382 aa7.54□□□□□ -1.2
CLINT1-208ENST00000524306 STAC3Q96MF2 364 aa7.54□□□□□ -1.2
CLINT1-208ENST00000524306 HIRIP3Q9BW71 556 aaPredicted RBP7.54□□□□□ -1.2
CLINT1-208ENST00000524306 TRPM2O94759 1503 aa7.54□□□□□ -1.2
CLINT1-208ENST00000524306 SPHKAPQ2M3C7 1700 aa7.54□□□□□ -1.2
CLINT1-208ENST00000524306 C11orf95C9JLR9 678 aaPredicted RBP7.53□□□□□ -1.2
CLINT1-208ENST00000524306 ZBED9Q6R2W3 1325 aa7.52□□□□□ -1.2
CLINT1-208ENST00000524306 PRAG1Q86YV5 1406 aa7.52□□□□□ -1.21
CLINT1-208ENST00000524306 ADGRL1O94910 1474 aa7.52□□□□□ -1.21
CLINT1-208ENST00000524306 NEFLP07196 543 aa7.52□□□□□ -1.21
CLINT1-208ENST00000524306 PLA2R1Q13018 1463 aa7.52□□□□□ -1.21
CLINT1-208ENST00000524306 FRMPD1Q5SYB0 1578 aa7.52□□□□□ -1.21
CLINT1-208ENST00000524306 PTPRTO14522 1441 aa7.52□□□□□ -1.21
CLINT1-208ENST00000524306 ZNF777Q9ULD5 760 aaPredicted RBP7.51□□□□□ -1.21
CLINT1-208ENST00000524306 AGLP35573 1532 aa7.51□□□□□ -1.21
CLINT1-208ENST00000524306 IFT172Q9UG01 1749 aa7.51□□□□□ -1.21
CLINT1-208ENST00000524306 EFCAB6Q5THR3 1501 aa7.51□□□□□ -1.21
CLINT1-208ENST00000524306 WASHC2CQ9Y4E1 1318 aa7.5□□□□□ -1.21
CLINT1-208ENST00000524306 CCDC144AA2RUR9 1427 aa7.5□□□□□ -1.21
CLINT1-208ENST00000524306 KIF13AQ9H1H9 1805 aa7.5□□□□□ -1.21
CLINT1-208ENST00000524306 HNRNPMP52272 730 aaKnown RBP eCLIP7.5□□□□□ -1.21
CLINT1-208ENST00000524306 ABCA6Q8N139 1617 aa7.5□□□□□ -1.21
CLINT1-208ENST00000524306 TRAPPC8Q9Y2L5 1435 aa7.5□□□□□ -1.21
CLINT1-208ENST00000524306 DIP2CQ9Y2E4 1556 aa7.49□□□□□ -1.21
CLINT1-208ENST00000524306 CD109Q6YHK3 1445 aa7.49□□□□□ -1.21
CLINT1-208ENST00000524306 A2MP01023 1474 aa7.49□□□□□ -1.21
CLINT1-208ENST00000524306 PIK3C2BO00750 1634 aa7.48□□□□□ -1.21
CLINT1-208ENST00000524306 SMG6Q86US8 1419 aaKnown RBP7.48□□□□□ -1.21
CLINT1-208ENST00000524306 BRD4O60885 1362 aaPredicted RBP7.48□□□□□ -1.21
CLINT1-208ENST00000524306 FKBP8Q14318 412 aa7.48□□□□□ -1.21
CLINT1-208ENST00000524306 TSHZ2Q9NRE2 1034 aa7.48□□□□□ -1.21
CLINT1-208ENST00000524306 KDM5AP29375 1690 aaKnown RBP7.48□□□□□ -1.21
CLINT1-208ENST00000524306 LRPPRCP42704 1394 aaKnown RBP7.47□□□□□ -1.21
CLINT1-208ENST00000524306 ARHGAP31Q2M1Z3 1444 aa7.47□□□□□ -1.21
CLINT1-208ENST00000524306 COL17A1Q9UMD9 1497 aaPredicted RBP7.47□□□□□ -1.21
CLINT1-208ENST00000524306 RALBP1Q15311 655 aa7.47□□□□□ -1.21
CLINT1-208ENST00000524306 SCAPERQ9BY12 1400 aa7.47□□□□□ -1.21
CLINT1-208ENST00000524306 HNRNPUQ00839 825 aaKnown RBP eCLIP7.47□□□□□ -1.21
CLINT1-208ENST00000524306 RNF123Q5XPI4 1314 aa7.46□□□□□ -1.21
CLINT1-208ENST00000524306 CARD11Q9BXL7 1154 aa7.46□□□□□ -1.22
CLINT1-208ENST00000524306 CAMSAP1Q5T5Y3 1602 aa7.46□□□□□ -1.22
CLINT1-208ENST00000524306 MRS2Q9HD23 443 aa7.45□□□□□ -1.22
CLINT1-208ENST00000524306 ARHGEF40Q8TER5 1519 aa7.45□□□□□ -1.22
CLINT1-208ENST00000524306 NPM1P06748 294 aaKnown RBP eCLIP7.45□□□□□ -1.22
CLINT1-208ENST00000524306 MYOM2P54296 1465 aa7.45□□□□□ -1.22
CLINT1-208ENST00000524306 MADDQ8WXG6 1647 aa7.45□□□□□ -1.22
CLINT1-208ENST00000524306 IQGAP1P46940 1657 aa7.45□□□□□ -1.22
CLINT1-208ENST00000524306 KIF1BO60333 1816 aa7.45□□□□□ -1.22
CLINT1-208ENST00000524306 PARD3Q8TEW0 1356 aa7.45□□□□□ -1.22
CLINT1-208ENST00000524306 NRXN1Q9ULB1 1477 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms