RNA–Protein interactions for RNA: ENST00000524291.1

VDAC3-212, Transcript of voltage dependent anion channel 3, humanhuman

TSL 2

Gene VDAC3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDAC3-212ENST00000524291 FBXW7Q969H0 707 aa11.77□□□□□ -0.53
VDAC3-212ENST00000524291 BCAMP50895 628 aa11.75□□□□□ -0.53
VDAC3-212ENST00000524291 PHF14O94880 888 aa11.74□□□□□ -0.53
VDAC3-212ENST00000524291 ITGBL1O95965 494 aaPredicted RBP11.74□□□□□ -0.53
VDAC3-212ENST00000524291 LAPTM4BQ86VI4 370 aa11.74□□□□□ -0.53
VDAC3-212ENST00000524291 SOWAHBA6NEL2 793 aa11.72□□□□□ -0.53
VDAC3-212ENST00000524291 KIAA1468Q9P260 1216 aa11.71□□□□□ -0.53
VDAC3-212ENST00000524291 NYAP1Q6ZVC0 841 aa11.7□□□□□ -0.54
VDAC3-212ENST00000524291 ZFRQ96KR1 1074 aaKnown RBP11.7□□□□□ -0.54
VDAC3-212ENST00000524291 DCAF8L2P0C7V8 631 aa11.69□□□□□ -0.54
VDAC3-212ENST00000524291 ONECUT3O60422 494 aaPredicted RBP11.67□□□□□ -0.54
VDAC3-212ENST00000524291 EPAS1Q99814 870 aa11.67□□□□□ -0.54
VDAC3-212ENST00000524291 C6orf132Q5T0Z8 1188 aa11.66□□□□□ -0.54
VDAC3-212ENST00000524291 WBP1LQ9NX94 342 aa11.66□□□□□ -0.54
VDAC3-212ENST00000524291 SEPT9Q9UHD8 586 aaPredicted RBP11.66□□□□□ -0.54
VDAC3-212ENST00000524291 KCNC4Q03721 635 aa11.65□□□□□ -0.54
VDAC3-212ENST00000524291 CADPS2Q86UW7 1296 aa11.65□□□□□ -0.54
VDAC3-212ENST00000524291 TRIM6-TRIM34B2RNG4 842 aa11.62□□□□□ -0.55
VDAC3-212ENST00000524291 Q6ZNB5 142 aa11.62□□□□□ -0.55
VDAC3-212ENST00000524291 RBM33Q96EV2 1170 aaKnown RBP11.62□□□□□ -0.55
VDAC3-212ENST00000524291 DPYSL4O14531 572 aa11.61□□□□□ -0.55
VDAC3-212ENST00000524291 FAM98CQ17RN3 349 aaKnown RBP11.61□□□□□ -0.55
VDAC3-212ENST00000524291 LRCH3Q96II8 777 aa11.6□□□□□ -0.55
VDAC3-212ENST00000524291 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.6□□□□□ -0.55
VDAC3-212ENST00000524291 CAMK2BQ13554 666 aa11.59□□□□□ -0.55
VDAC3-212ENST00000524291 TSR3Q9UJK0 312 aaKnown RBP11.59□□□□□ -0.55
VDAC3-212ENST00000524291 HPS5Q9UPZ3 1129 aa11.59□□□□□ -0.55
VDAC3-212ENST00000524291 DDX12PQ92771 950 aa11.57□□□□□ -0.56
VDAC3-212ENST00000524291 PACS2Q86VP3 889 aa11.54□□□□□ -0.56
VDAC3-212ENST00000524291 MAP3K7O43318 606 aa11.51□□□□□ -0.57
VDAC3-212ENST00000524291 NBR1Q14596 966 aa11.51□□□□□ -0.57
VDAC3-212ENST00000524291 PPP4CP60510 307 aa11.5□□□□□ -0.57
VDAC3-212ENST00000524291 EN1Q05925 392 aaPredicted RBP11.5□□□□□ -0.57
VDAC3-212ENST00000524291 LAPTM4AQ15012 233 aa11.5□□□□□ -0.57
VDAC3-212ENST00000524291 TSKSQ9UJT2 592 aa11.49□□□□□ -0.57
VDAC3-212ENST00000524291 TSR1Q2NL82 804 aaKnown RBP11.48□□□□□ -0.57
VDAC3-212ENST00000524291 GFRA3O60609 400 aa11.44□□□□□ -0.58
VDAC3-212ENST00000524291 PDIA6Q15084 440 aa11.43□□□□□ -0.58
VDAC3-212ENST00000524291 SAMD7Q7Z3H4 446 aa11.43□□□□□ -0.58
VDAC3-212ENST00000524291 SPDYE16A6NNV3 312 aaPredicted RBP11.42□□□□□ -0.58
VDAC3-212ENST00000524291 SMAPO00193 183 aa11.42□□□□□ -0.58
VDAC3-212ENST00000524291 CDCA7LQ96GN5 454 aa11.42□□□□□ -0.58
VDAC3-212ENST00000524291 TJAP1Q5JTD0 557 aa11.41□□□□□ -0.58
VDAC3-212ENST00000524291 PRSS12P56730 875 aa11.4□□□□□ -0.58
VDAC3-212ENST00000524291 TRAF7Q6Q0C0 670 aa11.39□□□□□ -0.59
VDAC3-212ENST00000524291 CERKQ8TCT0 537 aa11.39□□□□□ -0.59
VDAC3-212ENST00000524291 PRKD2Q9BZL6 878 aa11.39□□□□□ -0.59
VDAC3-212ENST00000524291 NBPF26B4DH59 902 aa11.38□□□□□ -0.59
VDAC3-212ENST00000524291 MTRQ99707 1265 aa11.38□□□□□ -0.59
VDAC3-212ENST00000524291 IL21Q9HBE4 155 aa11.38□□□□□ -0.59
VDAC3-212ENST00000524291 TATDN2Q93075 761 aa11.36□□□□□ -0.59
VDAC3-212ENST00000524291 FAM198AQ9UFP1 575 aa11.36□□□□□ -0.59
VDAC3-212ENST00000524291 PNMA3Q9UL41 463 aa11.36□□□□□ -0.59
VDAC3-212ENST00000524291 RNF40O75150 1001 aa11.35□□□□□ -0.59
VDAC3-212ENST00000524291 HDGFP51858 240 aaKnown RBP11.35□□□□□ -0.59
VDAC3-212ENST00000524291 PPP1R18Q6NYC8 613 aa11.35□□□□□ -0.59
VDAC3-212ENST00000524291 GRXCR2A6NFK2 248 aa11.34□□□□□ -0.59
VDAC3-212ENST00000524291 LCE2BO14633 110 aa11.34□□□□□ -0.59
VDAC3-212ENST00000524291 NRG2O14511 850 aaPredicted RBP11.33□□□□□ -0.6
VDAC3-212ENST00000524291 BBXQ8WY36 941 aaPredicted RBP11.33□□□□□ -0.6
VDAC3-212ENST00000524291 V9GY48 417 aaPredicted RBP11.33□□□□□ -0.6
VDAC3-212ENST00000524291 C3orf80F5H4A9 247 aa11.31□□□□□ -0.6
VDAC3-212ENST00000524291 PRIM1P49642 420 aaKnown RBP11.31□□□□□ -0.6
VDAC3-212ENST00000524291 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.31□□□□□ -0.6
VDAC3-212ENST00000524291 E2F4Q16254 413 aa11.3□□□□□ -0.6
VDAC3-212ENST00000524291 ZNF516Q92618 1163 aa11.3□□□□□ -0.6
VDAC3-212ENST00000524291 NUDT18Q6ZVK8 323 aa11.29□□□□□ -0.6
VDAC3-212ENST00000524291 APLP1P51693 650 aa11.28□□□□□ -0.6
VDAC3-212ENST00000524291 NECTIN2Q92692 538 aa11.26□□□□□ -0.61
VDAC3-212ENST00000524291 CDHR5Q9HBB8 845 aa11.26□□□□□ -0.61
VDAC3-212ENST00000524291 RBM27Q9P2N5 1060 aaKnown RBP11.26□□□□□ -0.61
VDAC3-212ENST00000524291 GGCXP38435 758 aa11.25□□□□□ -0.61
VDAC3-212ENST00000524291 SPRYD3Q8NCJ5 442 aa11.25□□□□□ -0.61
VDAC3-212ENST00000524291 WDR70Q9NW82 654 aa11.25□□□□□ -0.61
VDAC3-212ENST00000524291 NKX2-3Q8TAU0 364 aa11.24□□□□□ -0.61
VDAC3-212ENST00000524291 PDZRN3Q9UPQ7 1066 aa11.24□□□□□ -0.61
VDAC3-212ENST00000524291 ARIH1Q9Y4X5 557 aaPredicted RBP11.24□□□□□ -0.61
VDAC3-212ENST00000524291 OSBPP22059 807 aa11.23□□□□□ -0.61
VDAC3-212ENST00000524291 COPS2P61201 443 aa11.22□□□□□ -0.61
VDAC3-212ENST00000524291 SLF2Q8IX21 1173 aa11.22□□□□□ -0.61
VDAC3-212ENST00000524291 SWT1Q5T5J6 900 aaKnown RBP11.21□□□□□ -0.61
VDAC3-212ENST00000524291 SLC4A3P48751 1232 aa11.2□□□□□ -0.62
VDAC3-212ENST00000524291 ZNF787Q6DD87 383 aa11.19□□□□□ -0.62
VDAC3-212ENST00000524291 PADI6Q6TGC4 694 aa11.19□□□□□ -0.62
VDAC3-212ENST00000524291 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.19□□□□□ -0.62
VDAC3-212ENST00000524291 TTC13Q8NBP0 860 aa11.17□□□□□ -0.62
VDAC3-212ENST00000524291 TMUB1Q9BVT8 246 aa11.17□□□□□ -0.62
VDAC3-212ENST00000524291 ZPR1O75312 459 aa11.15□□□□□ -0.62
VDAC3-212ENST00000524291 PRR14Q9BWN1 585 aa11.14□□□□□ -0.63
VDAC3-212ENST00000524291 NPDC1Q9NQX5 325 aaPredicted RBP11.13□□□□□ -0.63
VDAC3-212ENST00000524291 PCDHB3Q9Y5E6 796 aa11.12□□□□□ -0.63
VDAC3-212ENST00000524291 CFAP44Q96MT7 982 aa11.1□□□□□ -0.63
VDAC3-212ENST00000524291 EYA1Q99502 592 aa11.1□□□□□ -0.63
VDAC3-212ENST00000524291 SLC19A1P41440 591 aa11.08□□□□□ -0.64
VDAC3-212ENST00000524291 PAXIP1Q6ZW49 1069 aaPredicted RBP11.08□□□□□ -0.64
VDAC3-212ENST00000524291 RNF223E7ERA6 249 aa11.07□□□□□ -0.64
VDAC3-212ENST00000524291 BLOC1S3Q6QNY0 202 aa11.07□□□□□ -0.64
VDAC3-212ENST00000524291 ZNF775Q96BV0 537 aaPredicted RBP11.05□□□□□ -0.64
VDAC3-212ENST00000524291 PKDCCQ504Y2 493 aa11.04□□□□□ -0.64
VDAC3-212ENST00000524291 TRIM67Q6ZTA4 783 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms