RNA–Protein interactions for RNA: ENST00000524126.5

SPIDR-224, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 1 (best)

Gene SPIDR, Length 2,614 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-224ENST00000524126 SHROOM2Q13796 1616 aa13.31□□□□□ -0.28
SPIDR-224ENST00000524126 L1TD1Q5T7N2 865 aaKnown RBP13.3□□□□□ -0.28
SPIDR-224ENST00000524126 PNISRQ8TF01 805 aaKnown RBP13.3□□□□□ -0.28
SPIDR-224ENST00000524126 ZNF777Q9ULD5 760 aaPredicted RBP13.3□□□□□ -0.28
SPIDR-224ENST00000524126 PTPN23Q9H3S7 1636 aa13.3□□□□□ -0.28
SPIDR-224ENST00000524126 CLASP1Q7Z460 1538 aa13.3□□□□□ -0.28
SPIDR-224ENST00000524126 AAMPQ13685 434 aa13.3□□□□□ -0.28
SPIDR-224ENST00000524126 CRBNQ96SW2 442 aa13.3□□□□□ -0.28
SPIDR-224ENST00000524126 RRP7BPQ9NSQ0 103 aa13.3□□□□□ -0.28
SPIDR-224ENST00000524126 C8orf34Q49A92 452 aa13.29□□□□□ -0.28
SPIDR-224ENST00000524126 DHX29Q7Z478 1369 aaKnown RBP13.29□□□□□ -0.28
SPIDR-224ENST00000524126 XRCC6P12956 609 aaKnown RBP eCLIP13.29□□□□□ -0.28
SPIDR-224ENST00000524126 L3MBTL2Q969R5 705 aa13.29□□□□□ -0.28
SPIDR-224ENST00000524126 NBPF8Q3BBV2 869 aa13.27□□□□□ -0.29
SPIDR-224ENST00000524126 TMC1Q8TDI8 760 aa13.27□□□□□ -0.29
SPIDR-224ENST00000524126 RGS3P49796 1198 aa13.26□□□□□ -0.29
SPIDR-224ENST00000524126 PRDM4Q9UKN5 801 aa13.26□□□□□ -0.29
SPIDR-224ENST00000524126 HFM1A2PYH4 1435 aa13.26□□□□□ -0.29
SPIDR-224ENST00000524126 SLKQ9H2G2 1235 aaPredicted RBP13.26□□□□□ -0.29
SPIDR-224ENST00000524126 TROQ12816 1431 aaPredicted RBP13.26□□□□□ -0.29
SPIDR-224ENST00000524126 FAM161AQ3B820 660 aa13.26□□□□□ -0.29
SPIDR-224ENST00000524126 PLEKHD1A6NEE1 506 aa13.25□□□□□ -0.29
SPIDR-224ENST00000524126 FOXD1Q16676 465 aa13.25□□□□□ -0.29
SPIDR-224ENST00000524126 CDCA7LQ96GN5 454 aa13.25□□□□□ -0.29
SPIDR-224ENST00000524126 NAIPQ13075 1403 aa13.24□□□□□ -0.29
SPIDR-224ENST00000524126 GZF1Q9H116 711 aaPredicted RBP13.24□□□□□ -0.29
SPIDR-224ENST00000524126 FGD1P98174 961 aa13.23□□□□□ -0.29
SPIDR-224ENST00000524126 C20orf194Q5TEA3 1177 aa13.23□□□□□ -0.29
SPIDR-224ENST00000524126 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.22□□□□□ -0.29
SPIDR-224ENST00000524126 ERBB4Q15303 1308 aa13.22□□□□□ -0.29
SPIDR-224ENST00000524126 DENND4BO75064 1496 aaPredicted RBP13.22□□□□□ -0.29
SPIDR-224ENST00000524126 GOLGA6L3A6NEY3 463 aa13.22□□□□□ -0.29
SPIDR-224ENST00000524126 KDM6BO15054 1643 aa13.22□□□□□ -0.29
SPIDR-224ENST00000524126 CFDP1Q9UEE9 299 aaPredicted RBP13.21□□□□□ -0.29
SPIDR-224ENST00000524126 GPATCH8Q9UKJ3 1502 aaKnown RBP13.21□□□□□ -0.29
SPIDR-224ENST00000524126 KTN1Q86UP2 1357 aaKnown RBP13.21□□□□□ -0.3
SPIDR-224ENST00000524126 KDM2BQ8NHM5 1336 aa13.2□□□□□ -0.3
SPIDR-224ENST00000524126 CALD1Q05682 793 aaKnown RBP13.2□□□□□ -0.3
SPIDR-224ENST00000524126 SPATA31E1Q6ZUB1 1445 aa13.19□□□□□ -0.3
SPIDR-224ENST00000524126 OSCARQ8IYS5 282 aa13.19□□□□□ -0.3
SPIDR-224ENST00000524126 TCOF1Q13428 1488 aaKnown RBP13.19□□□□□ -0.3
SPIDR-224ENST00000524126 PDCL3Q9H2J4 239 aa13.19□□□□□ -0.3
SPIDR-224ENST00000524126 LRPPRCP42704 1394 aaKnown RBP13.18□□□□□ -0.3
SPIDR-224ENST00000524126 FSD2A1L4K1 749 aa13.18□□□□□ -0.3
SPIDR-224ENST00000524126 CDC42BPAQ5VT25 1732 aa13.17□□□□□ -0.3
SPIDR-224ENST00000524126 CAMSAP2Q08AD1 1489 aa13.17□□□□□ -0.3
SPIDR-224ENST00000524126 ABCC2Q92887 1545 aa13.17□□□□□ -0.3
SPIDR-224ENST00000524126 POLR1AO95602 1720 aaPredicted RBP13.16□□□□□ -0.3
SPIDR-224ENST00000524126 ABCC5O15440 1437 aa13.16□□□□□ -0.3
SPIDR-224ENST00000524126 ESPNB1AK53 854 aa13.16□□□□□ -0.3
SPIDR-224ENST00000524126 ABCC10Q5T3U5 1492 aa13.16□□□□□ -0.3
SPIDR-224ENST00000524126 MIA2Q96PC5 1412 aa13.16□□□□□ -0.3
SPIDR-224ENST00000524126 CENPJQ9HC77 1338 aaPredicted RBP13.16□□□□□ -0.3
SPIDR-224ENST00000524126 DAPK1P53355 1430 aa13.15□□□□□ -0.3
SPIDR-224ENST00000524126 HNRNPMP52272 730 aaKnown RBP eCLIP13.15□□□□□ -0.33e-6■■■■□ 25.9
SPIDR-224ENST00000524126 USP19O94966 1318 aa13.15□□□□□ -0.3
SPIDR-224ENST00000524126 ADCY10Q96PN6 1610 aa13.15□□□□□ -0.3
SPIDR-224ENST00000524126 PDE4CQ08493 712 aa13.14□□□□□ -0.31
SPIDR-224ENST00000524126 TTC37Q6PGP7 1564 aa13.14□□□□□ -0.31
SPIDR-224ENST00000524126 ZCCHC11Q5TAX3 1644 aaKnown RBP13.14□□□□□ -0.31
SPIDR-224ENST00000524126 CENPQQ7L2Z9 268 aaPredicted RBP13.14□□□□□ -0.31
SPIDR-224ENST00000524126 TPM2P07951 284 aa13.13□□□□□ -0.31
SPIDR-224ENST00000524126 SEC24BO95487 1268 aa13.13□□□□□ -0.31
SPIDR-224ENST00000524126 BCORL1Q5H9F3 1711 aa13.13□□□□□ -0.31
SPIDR-224ENST00000524126 SPRYD3Q8NCJ5 442 aa13.12□□□□□ -0.31
SPIDR-224ENST00000524126 MPHOSPH9Q99550 1183 aa13.11□□□□□ -0.31
SPIDR-224ENST00000524126 ARID3AQ99856 593 aa13.11□□□□□ -0.31
SPIDR-224ENST00000524126 ANTXR1Q9H6X2 564 aa13.11□□□□□ -0.31
SPIDR-224ENST00000524126 DNMT1P26358 1616 aaKnown RBP13.11□□□□□ -0.31
SPIDR-224ENST00000524126 KIAA1211Q6ZU35 1233 aa13.11□□□□□ -0.31
SPIDR-224ENST00000524126 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.11□□□□□ -0.31
SPIDR-224ENST00000524126 CDC42BPBQ9Y5S2 1711 aa13.11□□□□□ -0.31
SPIDR-224ENST00000524126 ITSN2Q9NZM3 1697 aa13.1□□□□□ -0.31
SPIDR-224ENST00000524126 PDE3BQ13370 1112 aa13.09□□□□□ -0.31
SPIDR-224ENST00000524126 MYH16Q9H6N6 1097 aa13.09□□□□□ -0.31
SPIDR-224ENST00000524126 ZNF326Q5BKZ1 582 aaKnown RBP13.09□□□□□ -0.31
SPIDR-224ENST00000524126 BRD4O60885 1362 aaPredicted RBP13.08□□□□□ -0.31
SPIDR-224ENST00000524126 MYBBP1AQ9BQG0 1328 aaKnown RBP13.08□□□□□ -0.32
SPIDR-224ENST00000524126 BECN1Q14457 450 aa13.08□□□□□ -0.32
SPIDR-224ENST00000524126 ZHX1Q9UKY1 873 aaPredicted RBP13.08□□□□□ -0.32
SPIDR-224ENST00000524126 TEX14Q8IWB6 1497 aa13.08□□□□□ -0.32
SPIDR-224ENST00000524126 MRE11P49959 708 aa13.08□□□□□ -0.32
SPIDR-224ENST00000524126 GRPEL1Q9HAV7 217 aa13.08□□□□□ -0.32
SPIDR-224ENST00000524126 MCM4P33991 863 aa13.07□□□□□ -0.32
SPIDR-224ENST00000524126 SAMD9LQ8IVG5 1584 aa13.07□□□□□ -0.32
SPIDR-224ENST00000524126 RIPK4P57078 832 aa13.07□□□□□ -0.32
SPIDR-224ENST00000524126 GCC2Q8IWJ2 1684 aa13.06□□□□□ -0.32
SPIDR-224ENST00000524126 USP47Q96K76 1375 aa13.06□□□□□ -0.32
SPIDR-224ENST00000524126 BCL11BQ9C0K0 894 aaPredicted RBP13.06□□□□□ -0.32
SPIDR-224ENST00000524126 PRDM10Q9NQV6 1147 aa13.06□□□□□ -0.32
SPIDR-224ENST00000524126 TRIM44Q96DX7 344 aaPredicted RBP13.06□□□□□ -0.32
SPIDR-224ENST00000524126 FAM13BQ9NYF5 915 aa13.06□□□□□ -0.32
SPIDR-224ENST00000524126 TRAK2O60296 914 aa13.05□□□□□ -0.32
SPIDR-224ENST00000524126 KIF15Q9NS87 1388 aa13.05□□□□□ -0.32
SPIDR-224ENST00000524126 ARHGAP5Q13017 1502 aa13.05□□□□□ -0.32
SPIDR-224ENST00000524126 PREX2Q70Z35 1606 aa13.04□□□□□ -0.32
SPIDR-224ENST00000524126 SYCP2Q9BX26 1530 aa13.04□□□□□ -0.32
SPIDR-224ENST00000524126 UHRF1BP1LA0JNW5 1464 aa13.03□□□□□ -0.32
SPIDR-224ENST00000524126 RPRD2Q5VT52 1461 aaKnown RBP13.03□□□□□ -0.32
SPIDR-224ENST00000524126 CYB5RLQ6IPT4 315 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms