RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 GPR37O15354 613 aa13.61□□□□□ -0.23
CPNE3-206ENST00000523469 PRKCSHP14314 528 aaPredicted RBP13.61□□□□□ -0.23
CPNE3-206ENST00000523469 CDHR5Q9HBB8 845 aa13.61□□□□□ -0.23
CPNE3-206ENST00000523469 PTGDRQ13258 359 aa13.6□□□□□ -0.23
CPNE3-206ENST00000523469 ZMYND10O75800 440 aa13.59□□□□□ -0.23
CPNE3-206ENST00000523469 PTPREP23469 700 aa13.59□□□□□ -0.23
CPNE3-206ENST00000523469 CERKQ8TCT0 537 aa13.59□□□□□ -0.23
CPNE3-206ENST00000523469 HIC1Q14526 733 aa13.58□□□□□ -0.24
CPNE3-206ENST00000523469 HS3ST6Q96QI5 342 aa13.58□□□□□ -0.24
CPNE3-206ENST00000523469 NPDC1Q9NQX5 325 aaPredicted RBP13.58□□□□□ -0.24
CPNE3-206ENST00000523469 ZNF687Q8N1G0 1237 aa13.56□□□□□ -0.24
CPNE3-206ENST00000523469 KCNH8Q96L42 1107 aa13.56□□□□□ -0.24
CPNE3-206ENST00000523469 GNPATO15228 680 aa13.54□□□□□ -0.24
CPNE3-206ENST00000523469 BARGINQ6ZT62 677 aa13.54□□□□□ -0.24
CPNE3-206ENST00000523469 POTEB3A0JP26 581 aa13.53□□□□□ -0.24
CPNE3-206ENST00000523469 PPP1R3GB7ZBB8 358 aa13.53□□□□□ -0.24
CPNE3-206ENST00000523469 PBX2P40425 430 aa13.53□□□□□ -0.24
CPNE3-206ENST00000523469 POTEBQ6S5H4 581 aa13.53□□□□□ -0.24
CPNE3-206ENST00000523469 KCNK17Q96T54 332 aa13.53□□□□□ -0.24
CPNE3-206ENST00000523469 ARHGAP33O14559 1287 aa13.52□□□□□ -0.25
CPNE3-206ENST00000523469 COL9A1P20849 921 aa13.51□□□□□ -0.25
CPNE3-206ENST00000523469 POTEEQ6S8J3 1075 aa13.49□□□□□ -0.25
CPNE3-206ENST00000523469 RBM27Q9P2N5 1060 aaKnown RBP13.49□□□□□ -0.25
CPNE3-206ENST00000523469 PSEN2P49810 448 aa13.48□□□□□ -0.25
CPNE3-206ENST00000523469 KRI1Q8N9T8 703 aaKnown RBP13.48□□□□□ -0.25
CPNE3-206ENST00000523469 PRSS12P56730 875 aa13.47□□□□□ -0.25
CPNE3-206ENST00000523469 FECHP22830 423 aa13.46□□□□□ -0.25
CPNE3-206ENST00000523469 MAP2K5Q13163 448 aa13.46□□□□□ -0.25
CPNE3-206ENST00000523469 CDCA7LQ96GN5 454 aa13.46□□□□□ -0.25
CPNE3-206ENST00000523469 AXIN2Q9Y2T1 843 aa13.46□□□□□ -0.25
CPNE3-206ENST00000523469 MINK1Q8N4C8 1332 aaPredicted RBP13.45□□□□□ -0.26
CPNE3-206ENST00000523469 TTC13Q8NBP0 860 aa13.44□□□□□ -0.26
CPNE3-206ENST00000523469 PADI6Q6TGC4 694 aa13.43□□□□□ -0.26
CPNE3-206ENST00000523469 ZBED2Q9BTP6 218 aa13.43□□□□□ -0.26
CPNE3-206ENST00000523469 SLC24A3Q9HC58 644 aa13.43□□□□□ -0.26
CPNE3-206ENST00000523469 SLC4A5Q9BY07 1137 aa13.42□□□□□ -0.26
CPNE3-206ENST00000523469 IRF6O14896 467 aa13.41□□□□□ -0.26
CPNE3-206ENST00000523469 ONECUT3O60422 494 aaPredicted RBP13.41□□□□□ -0.26
CPNE3-206ENST00000523469 DMRTA1Q5VZB9 504 aa13.41□□□□□ -0.26
CPNE3-206ENST00000523469 POTEGQ6S5H5 508 aa13.41□□□□□ -0.26
CPNE3-206ENST00000523469 TRIM6-TRIM34B2RNG4 842 aa13.4□□□□□ -0.26
CPNE3-206ENST00000523469 AK7Q96M32 723 aa13.4□□□□□ -0.26
CPNE3-206ENST00000523469 POTEMA6NI47 508 aa13.38□□□□□ -0.27
CPNE3-206ENST00000523469 PROX2Q3B8N5 592 aa13.38□□□□□ -0.27
CPNE3-206ENST00000523469 TSKSQ9UJT2 592 aa13.38□□□□□ -0.27
CPNE3-206ENST00000523469 PACS2Q86VP3 889 aa13.37□□□□□ -0.27
CPNE3-206ENST00000523469 CCDC102AQ96A19 550 aa13.37□□□□□ -0.27
CPNE3-206ENST00000523469 FAM198AQ9UFP1 575 aa13.37□□□□□ -0.27
CPNE3-206ENST00000523469 LSM11P83369 360 aaKnown RBP eCLIP13.36□□□□□ -0.27
CPNE3-206ENST00000523469 TK2O00142 265 aa13.35□□□□□ -0.27
CPNE3-206ENST00000523469 ADGRG1Q9Y653 693 aa13.35□□□□□ -0.27
CPNE3-206ENST00000523469 OATP04181 439 aa13.34□□□□□ -0.27
CPNE3-206ENST00000523469 VPS9D1Q9Y2B5 631 aa13.34□□□□□ -0.27
CPNE3-206ENST00000523469 NBPF26B4DH59 902 aa13.33□□□□□ -0.28
CPNE3-206ENST00000523469 KIAA1468Q9P260 1216 aa13.32□□□□□ -0.28
CPNE3-206ENST00000523469 RABGEF1Q9UJ41 708 aa13.32□□□□□ -0.28
CPNE3-206ENST00000523469 FAM161AQ3B820 660 aa13.31□□□□□ -0.28
CPNE3-206ENST00000523469 RBM46Q8TBY0 533 aaKnown RBP13.31□□□□□ -0.28
CPNE3-206ENST00000523469 TRIM66O15016 1216 aa13.3□□□□□ -0.28
CPNE3-206ENST00000523469 PNMA3Q9UL41 463 aa13.3□□□□□ -0.28
CPNE3-206ENST00000523469 ADGRD1Q6QNK2 874 aa13.29□□□□□ -0.28
CPNE3-206ENST00000523469 NUDT18Q6ZVK8 323 aa13.29□□□□□ -0.28
CPNE3-206ENST00000523469 METTL3Q86U44 580 aaKnown RBP13.29□□□□□ -0.28
CPNE3-206ENST00000523469 PXYLP1Q8TE99 480 aa13.29□□□□□ -0.28
CPNE3-206ENST00000523469 TATDN2Q93075 761 aa13.29□□□□□ -0.28
CPNE3-206ENST00000523469 KRTAP3-3Q9BYR6 98 aa13.29□□□□□ -0.28
CPNE3-206ENST00000523469 KRTAP3-2Q9BYR7 98 aa13.29□□□□□ -0.28
CPNE3-206ENST00000523469 CDAN1Q8IWY9 1227 aa13.28□□□□□ -0.28
CPNE3-206ENST00000523469 C3orf80F5H4A9 247 aa13.27□□□□□ -0.29
CPNE3-206ENST00000523469 ANKRD13DQ6ZTN6 518 aa13.27□□□□□ -0.29
CPNE3-206ENST00000523469 EYA1Q99502 592 aa13.27□□□□□ -0.29
CPNE3-206ENST00000523469 AMHR2Q16671 573 aa13.25□□□□□ -0.29
CPNE3-206ENST00000523469 NBPF3Q9H094 633 aa13.25□□□□□ -0.29
CPNE3-206ENST00000523469 BHMG1C9JSJ3 638 aaPredicted RBP13.24□□□□□ -0.29
CPNE3-206ENST00000523469 SMAPO00193 183 aa13.23□□□□□ -0.29
CPNE3-206ENST00000523469 PDE4DQ08499 809 aa13.23□□□□□ -0.29
CPNE3-206ENST00000523469 PHOX2BQ99453 314 aa13.23□□□□□ -0.29
CPNE3-206ENST00000523469 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.22□□□□□ -0.29
CPNE3-206ENST00000523469 LAPTM4BQ86VI4 370 aa13.22□□□□□ -0.29
CPNE3-206ENST00000523469 HRO43593 1189 aa13.21□□□□□ -0.29
CPNE3-206ENST00000523469 SEPT9Q9UHD8 586 aaPredicted RBP13.21□□□□□ -0.29
CPNE3-206ENST00000523469 RCCD1A6NED2 376 aa13.2□□□□□ -0.3
CPNE3-206ENST00000523469 DNAJB2P25686 324 aa13.2□□□□□ -0.3
CPNE3-206ENST00000523469 FAM98CQ17RN3 349 aaKnown RBP13.2□□□□□ -0.3
CPNE3-206ENST00000523469 MRPL50Q8N5N7 158 aaKnown RBP13.19□□□□□ -0.3
CPNE3-206ENST00000523469 STAC3Q96MF2 364 aa13.19□□□□□ -0.3
CPNE3-206ENST00000523469 PCDH10Q9P2E7 1040 aa13.18□□□□□ -0.3
CPNE3-206ENST00000523469 CLCN1P35523 988 aa13.17□□□□□ -0.3
CPNE3-206ENST00000523469 BRPF1P55201 1214 aaPredicted RBP13.17□□□□□ -0.3
CPNE3-206ENST00000523469 MDM2Q00987 491 aaPredicted RBP13.16□□□□□ -0.3
CPNE3-206ENST00000523469 TTLL12Q14166 644 aaPredicted RBP13.16□□□□□ -0.3
CPNE3-206ENST00000523469 NEUROD2Q15784 382 aa13.16□□□□□ -0.3
CPNE3-206ENST00000523469 TMEM134Q9H6X4 195 aa13.16□□□□□ -0.3
CPNE3-206ENST00000523469 PARP9Q8IXQ6 854 aa13.15□□□□□ -0.3
CPNE3-206ENST00000523469 NLRP7Q8WX94 980 aa13.15□□□□□ -0.3
CPNE3-206ENST00000523469 GPCPD1Q9NPB8 672 aa13.15□□□□□ -0.3
CPNE3-206ENST00000523469 TMUB1Q9BVT8 246 aa13.14□□□□□ -0.31
CPNE3-206ENST00000523469 DAXXQ9UER7 740 aaPredicted RBP13.13□□□□□ -0.31
CPNE3-206ENST00000523469 HDGFP51858 240 aaKnown RBP13.12□□□□□ -0.31
CPNE3-206ENST00000523469 ZFRQ96KR1 1074 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms