RNA–Protein interactions for RNA: ENST00000522777.1

PCM1-216, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-216ENST00000522777 RBM33Q96EV2 1170 aaKnown RBP12.34□□□□□ -0.43
PCM1-216ENST00000522777 FOSBP53539 338 aa12.33□□□□□ -0.44
PCM1-216ENST00000522777 IL27Q8NEV9 243 aa12.33□□□□□ -0.44
PCM1-216ENST00000522777 FBXW7Q969H0 707 aa12.33□□□□□ -0.44
PCM1-216ENST00000522777 DOK7Q18PE1 504 aa12.31□□□□□ -0.44
PCM1-216ENST00000522777 ERICH6Q7L0X2 663 aa12.31□□□□□ -0.44
PCM1-216ENST00000522777 FAM117AQ9C073 453 aa12.31□□□□□ -0.44
PCM1-216ENST00000522777 DAXXQ9UER7 740 aaPredicted RBP12.31□□□□□ -0.44
PCM1-216ENST00000522777 KHSRPQ92945 711 aaKnown RBP eCLIP12.3□□□□□ -0.44
PCM1-216ENST00000522777 NUDT7P0C024 238 aa12.29□□□□□ -0.44
PCM1-216ENST00000522777 ARSIQ5FYB1 569 aa12.28□□□□□ -0.44
PCM1-216ENST00000522777 GPR153Q6NV75 609 aa12.28□□□□□ -0.44
PCM1-216ENST00000522777 ZSWIM6Q9HCJ5 1215 aa12.28□□□□□ -0.44
PCM1-216ENST00000522777 PLEKHG3A1L390 1219 aa12.27□□□□□ -0.45
PCM1-216ENST00000522777 ZNF454Q8N9F8 522 aa12.26□□□□□ -0.45
PCM1-216ENST00000522777 TTLL12Q14166 644 aaPredicted RBP12.25□□□□□ -0.45
PCM1-216ENST00000522777 ZDHHC16Q969W1 377 aa12.25□□□□□ -0.45
PCM1-216ENST00000522777 SCUBE2Q9NQ36 999 aa12.25□□□□□ -0.45
PCM1-216ENST00000522777 C6orf132Q5T0Z8 1188 aa12.24□□□□□ -0.45
PCM1-216ENST00000522777 C14orf37Q86TY3 774 aa12.24□□□□□ -0.45
PCM1-216ENST00000522777 REPIN1Q9BWE0 567 aaKnown RBP12.24□□□□□ -0.45
PCM1-216ENST00000522777 DDRGK1Q96HY6 314 aa12.23□□□□□ -0.45
PCM1-216ENST00000522777 PHOX2BQ99453 314 aa12.23□□□□□ -0.45
PCM1-216ENST00000522777 TMUB1Q9BVT8 246 aa12.23□□□□□ -0.45
PCM1-216ENST00000522777 ADAM33Q9BZ11 813 aa12.23□□□□□ -0.45
PCM1-216ENST00000522777 RIMBP2O15034 1052 aa12.22□□□□□ -0.45
PCM1-216ENST00000522777 GIGYF2Q6Y7W6 1299 aaKnown RBP12.22□□□□□ -0.45
PCM1-216ENST00000522777 MAMSTRQ6ZN01 415 aa12.22□□□□□ -0.45
PCM1-216ENST00000522777 PADI6Q6TGC4 694 aa12.21□□□□□ -0.45
PCM1-216ENST00000522777 TTC13Q8NBP0 860 aa12.21□□□□□ -0.45
PCM1-216ENST00000522777 CERKQ8TCT0 537 aa12.21□□□□□ -0.45
PCM1-216ENST00000522777 BICRAQ9NZM4 1560 aa12.21□□□□□ -0.46
PCM1-216ENST00000522777 UNC13AQ9UPW8 1703 aa12.2□□□□□ -0.46
PCM1-216ENST00000522777 MS4A1P11836 297 aa12.2□□□□□ -0.46
PCM1-216ENST00000522777 RBM27Q9P2N5 1060 aaKnown RBP12.19□□□□□ -0.46
PCM1-216ENST00000522777 LHX6Q9UPM6 363 aa12.18□□□□□ -0.46
PCM1-216ENST00000522777 FAM161AQ3B820 660 aa12.17□□□□□ -0.46
PCM1-216ENST00000522777 METTL3Q86U44 580 aaKnown RBP12.17□□□□□ -0.46
PCM1-216ENST00000522777 ADGRG1Q9Y653 693 aa12.17□□□□□ -0.46
PCM1-216ENST00000522777 CECR2Q9BXF3 1484 aa12.16□□□□□ -0.46
PCM1-216ENST00000522777 CLCN1P35523 988 aa12.16□□□□□ -0.46
PCM1-216ENST00000522777 ZNF710Q8N1W2 664 aa12.16□□□□□ -0.46
PCM1-216ENST00000522777 MDM2Q00987 491 aaPredicted RBP12.15□□□□□ -0.46
PCM1-216ENST00000522777 GPCPD1Q9NPB8 672 aa12.15□□□□□ -0.46
PCM1-216ENST00000522777 PRSS12P56730 875 aa12.13□□□□□ -0.47
PCM1-216ENST00000522777 PXYLP1Q8TE99 480 aa12.13□□□□□ -0.47
PCM1-216ENST00000522777 OATP04181 439 aa12.12□□□□□ -0.47
PCM1-216ENST00000522777 BCL2L12Q9HB09 334 aa12.12□□□□□ -0.47
PCM1-216ENST00000522777 MYO15BQ96JP2 1530 aa12.11□□□□□ -0.47
PCM1-216ENST00000522777 COL9A1P20849 921 aa12.11□□□□□ -0.47
PCM1-216ENST00000522777 PPP4R3BQ5MIZ7 849 aa12.11□□□□□ -0.47
PCM1-216ENST00000522777 CDCA7LQ96GN5 454 aa12.11□□□□□ -0.47
PCM1-216ENST00000522777 GOPCQ9HD26 462 aa12.11□□□□□ -0.47
PCM1-216ENST00000522777 PSDA5PKW4 1024 aaPredicted RBP12.1□□□□□ -0.47
PCM1-216ENST00000522777 HOXB1P14653 301 aaPredicted RBP12.1□□□□□ -0.47
PCM1-216ENST00000522777 NLRP7Q8WX94 980 aa12.1□□□□□ -0.47
PCM1-216ENST00000522777 FAM198AQ9UFP1 575 aa12.1□□□□□ -0.47
PCM1-216ENST00000522777 CC2D2AQ9P2K1 1620 aa12.08□□□□□ -0.48
PCM1-216ENST00000522777 FAM217BQ9NTX9 383 aaPredicted RBP12.08□□□□□ -0.48
PCM1-216ENST00000522777 SNPHO15079 494 aa12.07□□□□□ -0.48
PCM1-216ENST00000522777 SSTR3P32745 418 aaPredicted RBP12.07□□□□□ -0.48
PCM1-216ENST00000522777 PPP1R3GB7ZBB8 358 aa12.06□□□□□ -0.48
PCM1-216ENST00000522777 SHROOM4Q9ULL8 1493 aa12.05□□□□□ -0.48
PCM1-216ENST00000522777 SH3D19Q5HYK7 790 aa12.04□□□□□ -0.48
PCM1-216ENST00000522777 OTUD5Q96G74 571 aa12.04□□□□□ -0.48
PCM1-216ENST00000522777 TSKSQ9UJT2 592 aa12.04□□□□□ -0.48
PCM1-216ENST00000522777 PTPREP23469 700 aa12.03□□□□□ -0.48
PCM1-216ENST00000522777 RBM46Q8TBY0 533 aaKnown RBP12.03□□□□□ -0.48
PCM1-216ENST00000522777 C3orf80F5H4A9 247 aa12.02□□□□□ -0.49
PCM1-216ENST00000522777 EYA1Q99502 592 aa12.02□□□□□ -0.49
PCM1-216ENST00000522777 BEGAINQ9BUH8 593 aa12.02□□□□□ -0.49
PCM1-216ENST00000522777 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.99□□□□□ -0.49
PCM1-216ENST00000522777 TRIM6-TRIM34B2RNG4 842 aa11.98□□□□□ -0.49
PCM1-216ENST00000522777 PCMTD1Q96MG8 357 aaPredicted RBP11.98□□□□□ -0.49
PCM1-216ENST00000522777 RCCD1A6NED2 376 aa11.97□□□□□ -0.49
PCM1-216ENST00000522777 EIF4G1Q04637 1599 aaKnown RBP11.96□□□□□ -0.49
PCM1-216ENST00000522777 ONECUT3O60422 494 aaPredicted RBP11.96□□□□□ -0.49
PCM1-216ENST00000522777 SKIV2LQ15477 1246 aaKnown RBP11.95□□□□□ -0.5
PCM1-216ENST00000522777 NUDT18Q6ZVK8 323 aa11.95□□□□□ -0.5
PCM1-216ENST00000522777 KCNK17Q96T54 332 aa11.95□□□□□ -0.5
PCM1-216ENST00000522777 RSPH6AQ9H0K4 717 aa11.95□□□□□ -0.5
PCM1-216ENST00000522777 NBPF26B4DH59 902 aa11.94□□□□□ -0.5
PCM1-216ENST00000522777 TATDN2Q93075 761 aa11.94□□□□□ -0.5
PCM1-216ENST00000522777 PROX2Q3B8N5 592 aa11.93□□□□□ -0.5
PCM1-216ENST00000522777 MYSM1Q5VVJ2 828 aa11.93□□□□□ -0.5
PCM1-216ENST00000522777 PNMA3Q9UL41 463 aa11.92□□□□□ -0.5
PCM1-216ENST00000522777 CD46P15529 392 aa11.91□□□□□ -0.5
PCM1-216ENST00000522777 DNAJB2P25686 324 aa11.91□□□□□ -0.5
PCM1-216ENST00000522777 PACS2Q86VP3 889 aa11.91□□□□□ -0.5
PCM1-216ENST00000522777 PROCA1Q8NCQ7 364 aaPredicted RBP11.9□□□□□ -0.5
PCM1-216ENST00000522777 ZBED2Q9BTP6 218 aa11.9□□□□□ -0.5
PCM1-216ENST00000522777 ZMYND15Q9H091 742 aa11.9□□□□□ -0.5
PCM1-216ENST00000522777 TMEM134Q9H6X4 195 aa11.9□□□□□ -0.5
PCM1-216ENST00000522777 SUPT5HO00267 1087 aaKnown RBP11.89□□□□□ -0.51
PCM1-216ENST00000522777 FLIIQ13045 1269 aa11.89□□□□□ -0.51
PCM1-216ENST00000522777 POTEEQ6S8J3 1075 aa11.89□□□□□ -0.51
PCM1-216ENST00000522777 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.89□□□□□ -0.51
PCM1-216ENST00000522777 TBC1D2Q9BYX2 928 aa11.89□□□□□ -0.51
PCM1-216ENST00000522777 SMAPO00193 183 aa11.88□□□□□ -0.51
PCM1-216ENST00000522777 POLR3EQ9NVU0 708 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms