RNA–Protein interactions for RNA: ENST00000522117.5

SPIDR-217, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,745 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-217ENST00000522117 MAP7D2Q96T17 732 aa15.51■□□□□ 0.07
SPIDR-217ENST00000522117 POLR1AO95602 1720 aaPredicted RBP15.5■□□□□ 0.07
SPIDR-217ENST00000522117 WDR62O43379 1518 aa15.5■□□□□ 0.07
SPIDR-217ENST00000522117 USP19O94966 1318 aa15.49■□□□□ 0.07
SPIDR-217ENST00000522117 MYH16Q9H6N6 1097 aa15.49■□□□□ 0.07
SPIDR-217ENST00000522117 BCCIPQ9P287 314 aaKnown RBP eCLIP15.49■□□□□ 0.07
SPIDR-217ENST00000522117 FBXO3Q9UK99 471 aa15.49■□□□□ 0.07
SPIDR-217ENST00000522117 EFCAB5A4FU69 1503 aa15.48■□□□□ 0.07
SPIDR-217ENST00000522117 SLKQ9H2G2 1235 aaPredicted RBP15.48■□□□□ 0.07
SPIDR-217ENST00000522117 PBRM1Q86U86 1689 aa15.48■□□□□ 0.07
SPIDR-217ENST00000522117 LRPPRCP42704 1394 aaKnown RBP15.48■□□□□ 0.07
SPIDR-217ENST00000522117 CFAP43Q8NDM7 1665 aa15.48■□□□□ 0.07
SPIDR-217ENST00000522117 PLIN1O60240 522 aa15.48■□□□□ 0.07
SPIDR-217ENST00000522117 CANXP27824 592 aaKnown RBP15.48■□□□□ 0.07
SPIDR-217ENST00000522117 GZF1Q9H116 711 aaPredicted RBP15.48■□□□□ 0.07
SPIDR-217ENST00000522117 THOC2Q8NI27 1593 aaKnown RBP15.48■□□□□ 0.07
SPIDR-217ENST00000522117 UTP14CQ5TAP6 766 aaKnown RBP15.47■□□□□ 0.07
SPIDR-217ENST00000522117 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.46■□□□□ 0.07
SPIDR-217ENST00000522117 KCNA4P22459 653 aa15.46■□□□□ 0.07
SPIDR-217ENST00000522117 GRPEL1Q9HAV7 217 aa15.46■□□□□ 0.07
SPIDR-217ENST00000522117 TERF1P54274 439 aa15.45■□□□□ 0.06
SPIDR-217ENST00000522117 DMTNQ08495 405 aa15.45■□□□□ 0.06
SPIDR-217ENST00000522117 SECISBP2LQ93073 1101 aaKnown RBP15.45■□□□□ 0.06
SPIDR-217ENST00000522117 OFD1O75665 1012 aa15.44■□□□□ 0.06
SPIDR-217ENST00000522117 HSP90B1P14625 803 aaKnown RBP15.44■□□□□ 0.06
SPIDR-217ENST00000522117 FBLN2P98095 1184 aa15.44■□□□□ 0.06
SPIDR-217ENST00000522117 CENPQQ7L2Z9 268 aaPredicted RBP15.44■□□□□ 0.06
SPIDR-217ENST00000522117 SPATA31E1Q6ZUB1 1445 aa15.44■□□□□ 0.06
SPIDR-217ENST00000522117 PRDM10Q9NQV6 1147 aa15.44■□□□□ 0.06
SPIDR-217ENST00000522117 FAM13BQ9NYF5 915 aa15.44■□□□□ 0.06
SPIDR-217ENST00000522117 PTPN23Q9H3S7 1636 aa15.43■□□□□ 0.06
SPIDR-217ENST00000522117 CNGB1Q14028 1251 aaPredicted RBP15.43■□□□□ 0.06
SPIDR-217ENST00000522117 HFM1A2PYH4 1435 aa15.43■□□□□ 0.06
SPIDR-217ENST00000522117 MCM4P33991 863 aa15.43■□□□□ 0.06
SPIDR-217ENST00000522117 ATP1B4Q9UN42 357 aaPredicted RBP15.43■□□□□ 0.06
SPIDR-217ENST00000522117 TRIM44Q96DX7 344 aaPredicted RBP15.41■□□□□ 0.06
SPIDR-217ENST00000522117 BECN1Q14457 450 aa15.41■□□□□ 0.06
SPIDR-217ENST00000522117 SAMD9Q5K651 1589 aa15.4■□□□□ 0.06
SPIDR-217ENST00000522117 TMEM51Q9NW97 253 aa15.4■□□□□ 0.06
SPIDR-217ENST00000522117 FHOD3Q2V2M9 1422 aa15.4■□□□□ 0.06
SPIDR-217ENST00000522117 IFT140Q96RY7 1462 aa15.4■□□□□ 0.06
SPIDR-217ENST00000522117 PCF11O94913 1555 aaKnown RBP15.4■□□□□ 0.06
SPIDR-217ENST00000522117 FOXD1Q16676 465 aa15.4■□□□□ 0.06
SPIDR-217ENST00000522117 TMC1Q8TDI8 760 aa15.4■□□□□ 0.06
SPIDR-217ENST00000522117 VIRMAQ69YN4 1812 aaKnown RBP15.39■□□□□ 0.05
SPIDR-217ENST00000522117 TRAK2O60296 914 aa15.39■□□□□ 0.05
SPIDR-217ENST00000522117 PDE3BQ13370 1112 aa15.39■□□□□ 0.05
SPIDR-217ENST00000522117 PTPRKQ15262 1439 aa15.39■□□□□ 0.05
SPIDR-217ENST00000522117 ZSCAN20P17040 1043 aaPredicted RBP15.38■□□□□ 0.05
SPIDR-217ENST00000522117 C20orf194Q5TEA3 1177 aa15.38■□□□□ 0.05
SPIDR-217ENST00000522117 PPP4R3BQ5MIZ7 849 aa15.38■□□□□ 0.05
SPIDR-217ENST00000522117 TEX2Q8IWB9 1127 aa15.38■□□□□ 0.05
SPIDR-217ENST00000522117 NCLP19338 710 aaKnown RBP15.37■□□□□ 0.05
SPIDR-217ENST00000522117 DENND4BO75064 1496 aaPredicted RBP15.37■□□□□ 0.05
SPIDR-217ENST00000522117 ISY1Q9ULR0 285 aaKnown RBP15.37■□□□□ 0.05
SPIDR-217ENST00000522117 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.37■□□□□ 0.05
SPIDR-217ENST00000522117 L3MBTL2Q969R5 705 aa15.37■□□□□ 0.05
SPIDR-217ENST00000522117 CDCA7LQ96GN5 454 aa15.37■□□□□ 0.05
SPIDR-217ENST00000522117 SNAPC4Q5SXM2 1469 aa15.36■□□□□ 0.05
SPIDR-217ENST00000522117 NLRP1Q9C000 1473 aa15.36■□□□□ 0.05
SPIDR-217ENST00000522117 EIF4G3O43432 1585 aaKnown RBP15.36■□□□□ 0.05
SPIDR-217ENST00000522117 CNPY4Q8N129 248 aa15.36■□□□□ 0.05
SPIDR-217ENST00000522117 NAIPQ13075 1403 aa15.36■□□□□ 0.05
SPIDR-217ENST00000522117 GRIN2BQ13224 1484 aa15.35■□□□□ 0.05
SPIDR-217ENST00000522117 FYCO1Q9BQS8 1478 aa15.35■□□□□ 0.05
SPIDR-217ENST00000522117 ARID3CA6NKF2 412 aa15.35■□□□□ 0.05
SPIDR-217ENST00000522117 SEC24BO95487 1268 aa15.35■□□□□ 0.05
SPIDR-217ENST00000522117 NBPF8Q3BBV2 869 aa15.35■□□□□ 0.05
SPIDR-217ENST00000522117 FTSJ3Q8IY81 847 aaKnown RBP15.35■□□□□ 0.05
SPIDR-217ENST00000522117 POLR3GLQ9BT43 218 aa15.35■□□□□ 0.05
SPIDR-217ENST00000522117 MTERF4Q7Z6M4 381 aaKnown RBP15.34■□□□□ 0.05
SPIDR-217ENST00000522117 ADAMTS12P58397 1594 aa15.34■□□□□ 0.05
SPIDR-217ENST00000522117 ARID3AQ99856 593 aa15.34■□□□□ 0.05
SPIDR-217ENST00000522117 ZNF830Q96NB3 372 aaPredicted RBP15.33■□□□□ 0.05
SPIDR-217ENST00000522117 ZSCAN30Q86W11 494 aa15.33■□□□□ 0.04
SPIDR-217ENST00000522117 GAS2L3Q86XJ1 694 aa15.32■□□□□ 0.04
SPIDR-217ENST00000522117 LRRIQ1Q96JM4 1722 aa15.32■□□□□ 0.04
SPIDR-217ENST00000522117 R3HCC1Q9Y3T6 440 aaKnown RBP15.32■□□□□ 0.04
SPIDR-217ENST00000522117 BRD4O60885 1362 aaPredicted RBP15.32■□□□□ 0.04
SPIDR-217ENST00000522117 CHRM1P11229 460 aaPredicted RBP15.31■□□□□ 0.04
SPIDR-217ENST00000522117 FMN1Q68DA7 1419 aa15.31■□□□□ 0.04
SPIDR-217ENST00000522117 CHMP7Q8WUX9 453 aaPredicted RBP15.31■□□□□ 0.04
SPIDR-217ENST00000522117 TBC1D2Q9BYX2 928 aa15.31■□□□□ 0.04
SPIDR-217ENST00000522117 CASKIN1Q8WXD9 1431 aa15.31■□□□□ 0.04
SPIDR-217ENST00000522117 UQCRHLA0A096LP55 91 aa15.3■□□□□ 0.04
SPIDR-217ENST00000522117 UQCRHP07919 91 aa15.3■□□□□ 0.04
SPIDR-217ENST00000522117 PPP1R9BQ96SB3 815 aa15.3■□□□□ 0.04
SPIDR-217ENST00000522117 CCDC94Q9BW85 323 aaPredicted RBP15.3■□□□□ 0.04
SPIDR-217ENST00000522117 FGD6Q6ZV73 1430 aa15.29■□□□□ 0.04
SPIDR-217ENST00000522117 BCORL1Q5H9F3 1711 aa15.29■□□□□ 0.04
SPIDR-217ENST00000522117 DYNC1I1O14576 645 aa15.28■□□□□ 0.04
SPIDR-217ENST00000522117 KIF20AO95235 890 aa15.28■□□□□ 0.04
SPIDR-217ENST00000522117 PLCD3Q8N3E9 789 aa15.28■□□□□ 0.04
SPIDR-217ENST00000522117 ANP32BQ92688 251 aaKnown RBP15.27■□□□□ 0.04
SPIDR-217ENST00000522117 HECW1Q76N89 1606 aa15.27■□□□□ 0.03
SPIDR-217ENST00000522117 VGLL3A8MV65 326 aa15.27■□□□□ 0.03
SPIDR-217ENST00000522117 CCDC173Q0VFZ6 552 aa15.27■□□□□ 0.03
SPIDR-217ENST00000522117 CFAP44Q96MT7 982 aa15.27■□□□□ 0.03
SPIDR-217ENST00000522117 MIA2Q96PC5 1412 aa15.26■□□□□ 0.03
SPIDR-217ENST00000522117 GTPBP4Q9BZE4 634 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 161.1 ms