RNA–Protein interactions for RNA: ENST00000522045.5

SGCE-211, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 408 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-211ENST00000522045 PDIA6Q15084 440 aa14.22□□□□□ -0.13
SGCE-211ENST00000522045 BHMG1C9JSJ3 638 aaPredicted RBP14.2□□□□□ -0.14
SGCE-211ENST00000522045 DDX12PQ92771 950 aa14.2□□□□□ -0.14
SGCE-211ENST00000522045 SPDYE16A6NNV3 312 aaPredicted RBP14.19□□□□□ -0.14
SGCE-211ENST00000522045 NBPF3Q9H094 633 aa14.19□□□□□ -0.14
SGCE-211ENST00000522045 MRPL50Q8N5N7 158 aaKnown RBP14.18□□□□□ -0.14
SGCE-211ENST00000522045 COL9A1P20849 921 aa14.17□□□□□ -0.14
SGCE-211ENST00000522045 GOLGA8CPA6NN73 597 aa14.16□□□□□ -0.14
SGCE-211ENST00000522045 ARIH1Q9Y4X5 557 aaPredicted RBP14.16□□□□□ -0.14
SGCE-211ENST00000522045 C6orf132Q5T0Z8 1188 aa14.15□□□□□ -0.14
SGCE-211ENST00000522045 NBR1Q14596 966 aa14.14□□□□□ -0.15
SGCE-211ENST00000522045 PROX2Q3B8N5 592 aa14.14□□□□□ -0.15
SGCE-211ENST00000522045 RBM33Q96EV2 1170 aaKnown RBP14.14□□□□□ -0.15
SGCE-211ENST00000522045 RABGEF1Q9UJ41 708 aa14.13□□□□□ -0.15
SGCE-211ENST00000522045 EN1Q05925 392 aaPredicted RBP14.1□□□□□ -0.15
SGCE-211ENST00000522045 WNT2BQ93097 391 aa14.1□□□□□ -0.15
SGCE-211ENST00000522045 PLA2G2EQ9NZK7 142 aa14.09□□□□□ -0.15
SGCE-211ENST00000522045 MAP3K7O43318 606 aa14.08□□□□□ -0.16
SGCE-211ENST00000522045 PTPN5P54829 565 aa14.08□□□□□ -0.16
SGCE-211ENST00000522045 THSD4Q6ZMP0 1018 aa14.08□□□□□ -0.16
SGCE-211ENST00000522045 TSHZ2Q9NRE2 1034 aa14.07□□□□□ -0.16
SGCE-211ENST00000522045 ONECUT3O60422 494 aaPredicted RBP14.06□□□□□ -0.16
SGCE-211ENST00000522045 LAPTM4BQ86VI4 370 aa14.04□□□□□ -0.16
SGCE-211ENST00000522045 KIAA1468Q9P260 1216 aa14.04□□□□□ -0.16
SGCE-211ENST00000522045 GRXCR2A6NFK2 248 aa14.03□□□□□ -0.16
SGCE-211ENST00000522045 TRIM6-TRIM34B2RNG4 842 aa14.03□□□□□ -0.16
SGCE-211ENST00000522045 TSR1Q2NL82 804 aaKnown RBP14.03□□□□□ -0.16
SGCE-211ENST00000522045 ANKK1Q8NFD2 765 aa14.01□□□□□ -0.17
SGCE-211ENST00000522045 SEPT9Q9UHD8 586 aaPredicted RBP13.97□□□□□ -0.17
SGCE-211ENST00000522045 CERKQ8TCT0 537 aa13.96□□□□□ -0.17
SGCE-211ENST00000522045 ZFRQ96KR1 1074 aaKnown RBP13.95□□□□□ -0.18
SGCE-211ENST00000522045 PRIM1P49642 420 aaKnown RBP13.94□□□□□ -0.18
SGCE-211ENST00000522045 FAM98CQ17RN3 349 aaKnown RBP13.94□□□□□ -0.18
SGCE-211ENST00000522045 PACS2Q86VP3 889 aa13.94□□□□□ -0.18
SGCE-211ENST00000522045 OSBPP22059 807 aa13.93□□□□□ -0.18
SGCE-211ENST00000522045 ARHGEF1Q92888 912 aaKnown RBP13.93□□□□□ -0.18
SGCE-211ENST00000522045 TSKSQ9UJT2 592 aa13.93□□□□□ -0.18
SGCE-211ENST00000522045 KCNV2Q8TDN2 545 aa13.92□□□□□ -0.18
SGCE-211ENST00000522045 SOWAHBA6NEL2 793 aa13.91□□□□□ -0.18
SGCE-211ENST00000522045 BCAMP50895 628 aa13.91□□□□□ -0.18
SGCE-211ENST00000522045 CDCA7LQ96GN5 454 aa13.91□□□□□ -0.18
SGCE-211ENST00000522045 PRSS12P56730 875 aa13.9□□□□□ -0.18
SGCE-211ENST00000522045 CDHR5Q9HBB8 845 aa13.88□□□□□ -0.19
SGCE-211ENST00000522045 PLCB2Q00722 1185 aa13.86□□□□□ -0.19
SGCE-211ENST00000522045 P3H3Q8IVL6 736 aa13.86□□□□□ -0.19
SGCE-211ENST00000522045 LRCH3Q96II8 777 aa13.85□□□□□ -0.19
SGCE-211ENST00000522045 NBPF26B4DH59 902 aa13.84□□□□□ -0.19
SGCE-211ENST00000522045 NYAP1Q6ZVC0 841 aa13.84□□□□□ -0.19
SGCE-211ENST00000522045 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.84□□□□□ -0.19
SGCE-211ENST00000522045 RBM27Q9P2N5 1060 aaKnown RBP13.84□□□□□ -0.19
SGCE-211ENST00000522045 IFFO2Q5TF58 517 aa13.83□□□□□ -0.2
SGCE-211ENST00000522045 FAM198AQ9UFP1 575 aa13.82□□□□□ -0.2
SGCE-211ENST00000522045 WBP1LQ9NX94 342 aa13.81□□□□□ -0.2
SGCE-211ENST00000522045 SMAPO00193 183 aa13.8□□□□□ -0.2
SGCE-211ENST00000522045 MLLT3P42568 568 aaPredicted RBP13.8□□□□□ -0.2
SGCE-211ENST00000522045 TATDN2Q93075 761 aa13.8□□□□□ -0.2
SGCE-211ENST00000522045 PNMA3Q9UL41 463 aa13.8□□□□□ -0.2
SGCE-211ENST00000522045 TSR3Q9UJK0 312 aaKnown RBP13.79□□□□□ -0.2
SGCE-211ENST00000522045 HPS5Q9UPZ3 1129 aa13.79□□□□□ -0.2
SGCE-211ENST00000522045 NPDC1Q9NQX5 325 aaPredicted RBP13.76□□□□□ -0.21
SGCE-211ENST00000522045 C3orf80F5H4A9 247 aa13.75□□□□□ -0.21
SGCE-211ENST00000522045 NUDT18Q6ZVK8 323 aa13.75□□□□□ -0.21
SGCE-211ENST00000522045 ITGBL1O95965 494 aaPredicted RBP13.74□□□□□ -0.21
SGCE-211ENST00000522045 PADI6Q6TGC4 694 aa13.74□□□□□ -0.21
SGCE-211ENST00000522045 SAMD7Q7Z3H4 446 aa13.74□□□□□ -0.21
SGCE-211ENST00000522045 A0A0G2JS52 829 aa13.72□□□□□ -0.21
SGCE-211ENST00000522045 PPP4CP60510 307 aa13.72□□□□□ -0.21
SGCE-211ENST00000522045 TTC13Q8NBP0 860 aa13.72□□□□□ -0.21
SGCE-211ENST00000522045 HDGFP51858 240 aaKnown RBP13.7□□□□□ -0.22
SGCE-211ENST00000522045 SEMA3EO15041 775 aa13.66□□□□□ -0.22
SGCE-211ENST00000522045 RGS20O76081 388 aa13.66□□□□□ -0.22
SGCE-211ENST00000522045 KCNC4Q03721 635 aa13.66□□□□□ -0.22
SGCE-211ENST00000522045 PTGDRQ13258 359 aa13.66□□□□□ -0.22
SGCE-211ENST00000522045 RNF40O75150 1001 aa13.65□□□□□ -0.22
SGCE-211ENST00000522045 HAP1P54257 671 aaPredicted RBP13.65□□□□□ -0.22
SGCE-211ENST00000522045 NUTM2FA1L443 756 aa13.64□□□□□ -0.23
SGCE-211ENST00000522045 NECTIN2Q92692 538 aa13.61□□□□□ -0.23
SGCE-211ENST00000522045 SWT1Q5T5J6 900 aaKnown RBP13.6□□□□□ -0.23
SGCE-211ENST00000522045 EYA1Q99502 592 aa13.6□□□□□ -0.23
SGCE-211ENST00000522045 SLC4A3P48751 1232 aa13.59□□□□□ -0.23
SGCE-211ENST00000522045 SLF2Q8IX21 1173 aa13.59□□□□□ -0.23
SGCE-211ENST00000522045 FCHSD2O94868 740 aa13.57□□□□□ -0.24
SGCE-211ENST00000522045 TESPA1A2RU30 521 aaPredicted RBP13.56□□□□□ -0.24
SGCE-211ENST00000522045 SMYD5Q6GMV2 418 aa13.56□□□□□ -0.24
SGCE-211ENST00000522045 RBM46Q8TBY0 533 aaKnown RBP13.55□□□□□ -0.24
SGCE-211ENST00000522045 DNAJB2P25686 324 aa13.53□□□□□ -0.24
SGCE-211ENST00000522045 TJAP1Q5JTD0 557 aa13.53□□□□□ -0.24
SGCE-211ENST00000522045 ADGRG1Q9Y653 693 aa13.53□□□□□ -0.24
SGCE-211ENST00000522045 APLP1P51693 650 aa13.52□□□□□ -0.25
SGCE-211ENST00000522045 MTRQ99707 1265 aa13.52□□□□□ -0.25
SGCE-211ENST00000522045 IL21Q9HBE4 155 aa13.52□□□□□ -0.25
SGCE-211ENST00000522045 HIC1Q14526 733 aa13.48□□□□□ -0.25
SGCE-211ENST00000522045 RBM26Q5T8P6 1007 aaKnown RBP13.48□□□□□ -0.25
SGCE-211ENST00000522045 TMEM134Q9H6X4 195 aa13.48□□□□□ -0.25
SGCE-211ENST00000522045 KDM2AQ9Y2K7 1162 aa13.48□□□□□ -0.25
SGCE-211ENST00000522045 FAM161AQ3B820 660 aa13.47□□□□□ -0.25
SGCE-211ENST00000522045 PRR14Q9BWN1 585 aa13.47□□□□□ -0.25
SGCE-211ENST00000522045 RCCD1A6NED2 376 aa13.45□□□□□ -0.26
SGCE-211ENST00000522045 OATP04181 439 aa13.43□□□□□ -0.26
SGCE-211ENST00000522045 IRX2Q9BZI1 471 aaPredicted RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms