RNA–Protein interactions for RNA: ENST00000521553.5

RUNX1T1-234, Transcript of RUNX1 translocation partner 1, humanhuman

TSL 1 (best) BASIC

Gene RUNX1T1, Length 1,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1T1-234ENST00000521553 PDE4AP27815 886 aa11.9□□□□□ -0.5
RUNX1T1-234ENST00000521553 LAPTM4AQ15012 233 aa11.9□□□□□ -0.5
RUNX1T1-234ENST00000521553 PPP1R15BQ5SWA1 713 aa11.9□□□□□ -0.5
RUNX1T1-234ENST00000521553 JPH4Q96JJ6 628 aa11.9□□□□□ -0.5
RUNX1T1-234ENST00000521553 SMARCA2P51531 1590 aa11.89□□□□□ -0.51
RUNX1T1-234ENST00000521553 ZDHHC16Q969W1 377 aa11.88□□□□□ -0.51
RUNX1T1-234ENST00000521553 MROH2BQ7Z745 1585 aa11.88□□□□□ -0.51
RUNX1T1-234ENST00000521553 NCKAP5LQ9HCH0 1330 aa11.86□□□□□ -0.51
RUNX1T1-234ENST00000521553 ATAD2BQ9ULI0 1458 aa11.86□□□□□ -0.51
RUNX1T1-234ENST00000521553 NYAP1Q6ZVC0 841 aa11.86□□□□□ -0.51
RUNX1T1-234ENST00000521553 ADAM33Q9BZ11 813 aa11.85□□□□□ -0.51
RUNX1T1-234ENST00000521553 GTPBP6O43824 516 aaPredicted RBP11.84□□□□□ -0.51
RUNX1T1-234ENST00000521553 HMGXB3Q12766 1538 aa11.83□□□□□ -0.52
RUNX1T1-234ENST00000521553 KCNC4Q03721 635 aa11.83□□□□□ -0.52
RUNX1T1-234ENST00000521553 RABGEF1Q9UJ41 708 aa11.83□□□□□ -0.52
RUNX1T1-234ENST00000521553 PEG3Q9GZU2 1588 aa11.82□□□□□ -0.52
RUNX1T1-234ENST00000521553 NCAPD3P42695 1498 aa11.82□□□□□ -0.52
RUNX1T1-234ENST00000521553 BAZ1BQ9UIG0 1483 aaKnown RBP11.82□□□□□ -0.52
RUNX1T1-234ENST00000521553 BCAMP50895 628 aa11.82□□□□□ -0.52
RUNX1T1-234ENST00000521553 LARP6Q9BRS8 491 aaKnown RBP11.82□□□□□ -0.52
RUNX1T1-234ENST00000521553 WIZO95785 1651 aa11.81□□□□□ -0.52
RUNX1T1-234ENST00000521553 PPP1R3GB7ZBB8 358 aa11.81□□□□□ -0.52
RUNX1T1-234ENST00000521553 ANO8Q9HCE9 1232 aaPredicted RBP11.81□□□□□ -0.52
RUNX1T1-234ENST00000521553 EVI5O60447 810 aa11.8□□□□□ -0.52
RUNX1T1-234ENST00000521553 TRAF7Q6Q0C0 670 aa11.8□□□□□ -0.52
RUNX1T1-234ENST00000521553 SOWAHBA6NEL2 793 aa11.79□□□□□ -0.52
RUNX1T1-234ENST00000521553 DDX27Q96GQ7 796 aaKnown RBP11.79□□□□□ -0.52
RUNX1T1-234ENST00000521553 LAPTM4BQ86VI4 370 aa11.78□□□□□ -0.52
RUNX1T1-234ENST00000521553 GFRA3O60609 400 aa11.77□□□□□ -0.53
RUNX1T1-234ENST00000521553 MAP3K9P80192 1104 aa11.76□□□□□ -0.53
RUNX1T1-234ENST00000521553 PROX2Q3B8N5 592 aa11.76□□□□□ -0.53
RUNX1T1-234ENST00000521553 MFSD10Q14728 455 aa11.73□□□□□ -0.53
RUNX1T1-234ENST00000521553 WBP1LQ9NX94 342 aa11.73□□□□□ -0.53
RUNX1T1-234ENST00000521553 ZFRQ96KR1 1074 aaKnown RBP11.72□□□□□ -0.53
RUNX1T1-234ENST00000521553 RSF1Q96T23 1441 aaPredicted RBP11.72□□□□□ -0.53
RUNX1T1-234ENST00000521553 LCE2BO14633 110 aa11.71□□□□□ -0.53
RUNX1T1-234ENST00000521553 COL9A1P20849 921 aa11.68□□□□□ -0.54
RUNX1T1-234ENST00000521553 EMILIN3Q9NT22 766 aa11.67□□□□□ -0.54
RUNX1T1-234ENST00000521553 KIAA1468Q9P260 1216 aa11.67□□□□□ -0.54
RUNX1T1-234ENST00000521553 NRG2O14511 850 aaPredicted RBP11.66□□□□□ -0.54
RUNX1T1-234ENST00000521553 FBXW7Q969H0 707 aa11.66□□□□□ -0.54
RUNX1T1-234ENST00000521553 TOP2AP11388 1531 aaKnown RBP11.66□□□□□ -0.54
RUNX1T1-234ENST00000521553 PCDHGA10Q9Y5H3 936 aa11.65□□□□□ -0.54
RUNX1T1-234ENST00000521553 TYW1BQ6NUM6 668 aa11.64□□□□□ -0.55
RUNX1T1-234ENST00000521553 TSR3Q9UJK0 312 aaKnown RBP11.64□□□□□ -0.55
RUNX1T1-234ENST00000521553 CADPS2Q86UW7 1296 aa11.63□□□□□ -0.55
RUNX1T1-234ENST00000521553 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.63□□□□□ -0.55
RUNX1T1-234ENST00000521553 SEPT9Q9UHD8 586 aaPredicted RBP11.63□□□□□ -0.55
RUNX1T1-234ENST00000521553 ONECUT3O60422 494 aaPredicted RBP11.62□□□□□ -0.55
RUNX1T1-234ENST00000521553 LRCH3Q96II8 777 aa11.62□□□□□ -0.55
RUNX1T1-234ENST00000521553 HPS5Q9UPZ3 1129 aa11.62□□□□□ -0.55
RUNX1T1-234ENST00000521553 PRKD2Q9BZL6 878 aa11.61□□□□□ -0.55
RUNX1T1-234ENST00000521553 FAM98CQ17RN3 349 aaKnown RBP11.6□□□□□ -0.55
RUNX1T1-234ENST00000521553 NESP48681 1621 aa11.6□□□□□ -0.55
RUNX1T1-234ENST00000521553 ZNF787Q6DD87 383 aa11.6□□□□□ -0.55
RUNX1T1-234ENST00000521553 PHF14O94880 888 aa11.59□□□□□ -0.55
RUNX1T1-234ENST00000521553 LAMC3Q9Y6N6 1575 aa11.58□□□□□ -0.56
RUNX1T1-234ENST00000521553 ERCC6Q03468 1493 aa11.58□□□□□ -0.56
RUNX1T1-234ENST00000521553 TRIM6-TRIM34B2RNG4 842 aa11.55□□□□□ -0.56
RUNX1T1-234ENST00000521553 CAMK2BQ13554 666 aa11.54□□□□□ -0.56
RUNX1T1-234ENST00000521553 V9GY48 417 aaPredicted RBP11.54□□□□□ -0.56
RUNX1T1-234ENST00000521553 KIF21AQ7Z4S6 1674 aa11.54□□□□□ -0.56
RUNX1T1-234ENST00000521553 EPAS1Q99814 870 aa11.53□□□□□ -0.56
RUNX1T1-234ENST00000521553 PPP4CP60510 307 aa11.52□□□□□ -0.57
RUNX1T1-234ENST00000521553 C6orf132Q5T0Z8 1188 aa11.52□□□□□ -0.57
RUNX1T1-234ENST00000521553 DPYSL4O14531 572 aa11.51□□□□□ -0.57
RUNX1T1-234ENST00000521553 PRDM2Q13029 1718 aa11.5□□□□□ -0.57
RUNX1T1-234ENST00000521553 SUPT5HO00267 1087 aaKnown RBP11.5□□□□□ -0.57
RUNX1T1-234ENST00000521553 ZNF775Q96BV0 537 aaPredicted RBP11.49□□□□□ -0.57
RUNX1T1-234ENST00000521553 PDZRN3Q9UPQ7 1066 aa11.49□□□□□ -0.57
RUNX1T1-234ENST00000521553 CADPSQ9ULU8 1353 aa11.48□□□□□ -0.57
RUNX1T1-234ENST00000521553 CCDC88BA6NC98 1476 aa11.48□□□□□ -0.57
RUNX1T1-234ENST00000521553 TJAP1Q5JTD0 557 aa11.47□□□□□ -0.57
RUNX1T1-234ENST00000521553 PPP1R18Q6NYC8 613 aa11.47□□□□□ -0.57
RUNX1T1-234ENST00000521553 BBXQ8WY36 941 aaPredicted RBP11.47□□□□□ -0.57
RUNX1T1-234ENST00000521553 PDS5BQ9NTI5 1447 aa11.47□□□□□ -0.57
RUNX1T1-234ENST00000521553 IL21Q9HBE4 155 aa11.46□□□□□ -0.57
RUNX1T1-234ENST00000521553 THOC2Q8NI27 1593 aaKnown RBP11.44□□□□□ -0.58
RUNX1T1-234ENST00000521553 PACS2Q86VP3 889 aa11.44□□□□□ -0.58
RUNX1T1-234ENST00000521553 DDX12PQ92771 950 aa11.44□□□□□ -0.58
RUNX1T1-234ENST00000521553 RBM33Q96EV2 1170 aaKnown RBP11.44□□□□□ -0.58
RUNX1T1-234ENST00000521553 MTRQ99707 1265 aa11.43□□□□□ -0.58
RUNX1T1-234ENST00000521553 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.43□□□□□ -0.58
RUNX1T1-234ENST00000521553 CFTRP13569 1480 aa11.43□□□□□ -0.58
RUNX1T1-234ENST00000521553 CEP164Q9UPV0 1460 aa11.41□□□□□ -0.58
RUNX1T1-234ENST00000521553 FANCD2Q9BXW9 1451 aa11.4□□□□□ -0.58
RUNX1T1-234ENST00000521553 CUX2O14529 1486 aa11.4□□□□□ -0.59
RUNX1T1-234ENST00000521553 MRC2Q9UBG0 1479 aa11.38□□□□□ -0.59
RUNX1T1-234ENST00000521553 GGCXP38435 758 aa11.37□□□□□ -0.59
RUNX1T1-234ENST00000521553 SAMD7Q7Z3H4 446 aa11.37□□□□□ -0.59
RUNX1T1-234ENST00000521553 NBR1Q14596 966 aa11.36□□□□□ -0.59
RUNX1T1-234ENST00000521553 SPRYD3Q8NCJ5 442 aa11.36□□□□□ -0.59
RUNX1T1-234ENST00000521553 MAP3K7O43318 606 aa11.35□□□□□ -0.59
RUNX1T1-234ENST00000521553 PDIA6Q15084 440 aa11.35□□□□□ -0.59
RUNX1T1-234ENST00000521553 TSKSQ9UJT2 592 aa11.35□□□□□ -0.59
RUNX1T1-234ENST00000521553 SPDYE16A6NNV3 312 aaPredicted RBP11.35□□□□□ -0.59
RUNX1T1-234ENST00000521553 EN1Q05925 392 aaPredicted RBP11.35□□□□□ -0.59
RUNX1T1-234ENST00000521553 WDR62O43379 1518 aa11.34□□□□□ -0.59
RUNX1T1-234ENST00000521553 TSR1Q2NL82 804 aaKnown RBP11.34□□□□□ -0.59
RUNX1T1-234ENST00000521553 ZNF516Q92618 1163 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms