RNA–Protein interactions for RNA: ENST00000521540.1

NEFM-205, Transcript of neurofilament medium, humanhuman

TSL 5

Gene NEFM, Length 1,885 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-205ENST00000521540 FRMPD1Q5SYB0 1578 aa18.49■□□□□ 0.55
NEFM-205ENST00000521540 POGZQ7Z3K3 1410 aa18.48■□□□□ 0.55
NEFM-205ENST00000521540 CCDC141Q6ZP82 1450 aa18.46■□□□□ 0.55
NEFM-205ENST00000521540 PKD2Q13563 968 aa18.46■□□□□ 0.54
NEFM-205ENST00000521540 ZNF518AQ6AHZ1 1483 aa18.45■□□□□ 0.54
NEFM-205ENST00000521540 TRAPPC8Q9Y2L5 1435 aa18.45■□□□□ 0.54
NEFM-205ENST00000521540 KDM5CP41229 1560 aa18.45■□□□□ 0.54
NEFM-205ENST00000521540 NEFLP07196 543 aa18.44■□□□□ 0.54
NEFM-205ENST00000521540 UHRF1BP1Q6BDS2 1440 aa18.44■□□□□ 0.54
NEFM-205ENST00000521540 HNRNPMP52272 730 aaKnown RBP eCLIP18.43■□□□□ 0.54
NEFM-205ENST00000521540 MAST1Q9Y2H9 1570 aa18.43■□□□□ 0.54
NEFM-205ENST00000521540 ZMYM4Q5VZL5 1548 aa18.43■□□□□ 0.54
NEFM-205ENST00000521540 NUP155O75694 1391 aa18.42■□□□□ 0.54
NEFM-205ENST00000521540 RAPGEF3O95398 923 aa18.42■□□□□ 0.54
NEFM-205ENST00000521540 ARID4BQ4LE39 1312 aaPredicted RBP18.42■□□□□ 0.54
NEFM-205ENST00000521540 KIF15Q9NS87 1388 aa18.42■□□□□ 0.54
NEFM-205ENST00000521540 AFAP1Q8N556 730 aa18.39■□□□□ 0.54
NEFM-205ENST00000521540 HECW2Q9P2P5 1572 aa18.39■□□□□ 0.53
NEFM-205ENST00000521540 C11orf95C9JLR9 678 aaPredicted RBP18.38■□□□□ 0.53
NEFM-205ENST00000521540 INO80Q9ULG1 1556 aaPredicted RBP18.37■□□□□ 0.53
NEFM-205ENST00000521540 RALGAPBQ86X10 1494 aa18.37■□□□□ 0.53
NEFM-205ENST00000521540 KIF7Q2M1P5 1343 aa18.37■□□□□ 0.53
NEFM-205ENST00000521540 PRKRIP1Q9H875 184 aaPredicted RBP18.37■□□□□ 0.53
NEFM-205ENST00000521540 FKBP8Q14318 412 aa18.37■□□□□ 0.53
NEFM-205ENST00000521540 MLH3Q9UHC1 1453 aa18.36■□□□□ 0.53
NEFM-205ENST00000521540 ZFYVE16Q7Z3T8 1539 aa18.36■□□□□ 0.53
NEFM-205ENST00000521540 MAGI2Q86UL8 1455 aa18.36■□□□□ 0.53
NEFM-205ENST00000521540 KIDINS220Q9ULH0 1771 aa18.35■□□□□ 0.53
NEFM-205ENST00000521540 PLXNC1O60486 1568 aa18.35■□□□□ 0.53
NEFM-205ENST00000521540 ATP7AQ04656 1500 aa18.35■□□□□ 0.53
NEFM-205ENST00000521540 USP47Q96K76 1375 aa18.34■□□□□ 0.53
NEFM-205ENST00000521540 UNC13BO14795 1591 aa18.34■□□□□ 0.53
NEFM-205ENST00000521540 HNRNPUQ00839 825 aaKnown RBP eCLIP18.33■□□□□ 0.53
NEFM-205ENST00000521540 ARHGEF40Q8TER5 1519 aa18.33■□□□□ 0.52
NEFM-205ENST00000521540 SPAG9O60271 1321 aaKnown RBP18.33■□□□□ 0.52
NEFM-205ENST00000521540 RTEL1-TNFRSF6BF6WH68 1400 aa18.33■□□□□ 0.52
NEFM-205ENST00000521540 ROCK2O75116 1388 aaKnown RBP18.32■□□□□ 0.52
NEFM-205ENST00000521540 FAM135AQ9P2D6 1515 aa18.32■□□□□ 0.52
NEFM-205ENST00000521540 YEATS2Q9ULM3 1422 aa18.31■□□□□ 0.52
NEFM-205ENST00000521540 ABCA6Q8N139 1617 aa18.31■□□□□ 0.52
NEFM-205ENST00000521540 DIP2CQ9Y2E4 1556 aa18.3■□□□□ 0.52
NEFM-205ENST00000521540 BCORL1Q5H9F3 1711 aa18.29■□□□□ 0.52
NEFM-205ENST00000521540 IQGAP3Q86VI3 1631 aa18.26■□□□□ 0.51
NEFM-205ENST00000521540 MYT1Q01538 1121 aa18.26■□□□□ 0.51
NEFM-205ENST00000521540 MRS2Q9HD23 443 aa18.26■□□□□ 0.51
NEFM-205ENST00000521540 DUOX2Q9NRD8 1548 aa18.26■□□□□ 0.51
NEFM-205ENST00000521540 ERICH6BQ5W0A0 696 aa18.25■□□□□ 0.51
NEFM-205ENST00000521540 MYT1LQ9UL68 1186 aa18.25■□□□□ 0.51
NEFM-205ENST00000521540 ZNF326Q5BKZ1 582 aaKnown RBP18.24■□□□□ 0.51
NEFM-205ENST00000521540 REREQ9P2R6 1566 aa18.24■□□□□ 0.51
NEFM-205ENST00000521540 ATP10AO60312 1499 aa18.24■□□□□ 0.51
NEFM-205ENST00000521540 DHX29Q7Z478 1369 aaKnown RBP18.24■□□□□ 0.51
NEFM-205ENST00000521540 CARD11Q9BXL7 1154 aa18.23■□□□□ 0.51
NEFM-205ENST00000521540 ERBINQ96RT1 1412 aa18.23■□□□□ 0.51
NEFM-205ENST00000521540 TSHZ2Q9NRE2 1034 aa18.22■□□□□ 0.51
NEFM-205ENST00000521540 ZBED9Q6R2W3 1325 aa18.22■□□□□ 0.51
NEFM-205ENST00000521540 CCDC144AA2RUR9 1427 aa18.22■□□□□ 0.51
NEFM-205ENST00000521540 BCANQ96GW7 911 aa18.21■□□□□ 0.51
NEFM-205ENST00000521540 SIGLEC1Q9BZZ2 1709 aa18.2■□□□□ 0.5
NEFM-205ENST00000521540 LAMC1P11047 1609 aa18.2■□□□□ 0.5
NEFM-205ENST00000521540 A2MP01023 1474 aa18.2■□□□□ 0.5
NEFM-205ENST00000521540 KTN1Q86UP2 1357 aaKnown RBP18.2■□□□□ 0.5
NEFM-205ENST00000521540 CCDC184Q52MB2 194 aa18.2■□□□□ 0.5
NEFM-205ENST00000521540 TRPM1Q7Z4N2 1603 aa18.19■□□□□ 0.5
NEFM-205ENST00000521540 DCAF11Q8TEB1 546 aa18.18■□□□□ 0.5
NEFM-205ENST00000521540 AGLP35573 1532 aa18.17■□□□□ 0.5
NEFM-205ENST00000521540 FAM9BQ8IZU0 186 aa18.17■□□□□ 0.5
NEFM-205ENST00000521540 PRAG1Q86YV5 1406 aa18.17■□□□□ 0.5
NEFM-205ENST00000521540 EIF2AK4Q9P2K8 1649 aaKnown RBP18.17■□□□□ 0.5
NEFM-205ENST00000521540 E9PCH4 1651 aa18.15■□□□□ 0.5
NEFM-205ENST00000521540 KDM2AQ9Y2K7 1162 aa18.14■□□□□ 0.49
NEFM-205ENST00000521540 GPRASP1Q5JY77 1395 aa18.14■□□□□ 0.49
NEFM-205ENST00000521540 PLA2R1Q13018 1463 aa18.14■□□□□ 0.49
NEFM-205ENST00000521540 ST20-MTHFSA0A0A6YYL1 179 aa18.12■□□□□ 0.49
NEFM-205ENST00000521540 DEPDC5O75140 1603 aa18.11■□□□□ 0.49
NEFM-205ENST00000521540 POLR3GLQ9BT43 218 aa18.1■□□□□ 0.49
NEFM-205ENST00000521540 RALBP1Q15311 655 aa18.09■□□□□ 0.49
NEFM-205ENST00000521540 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.09■□□□□ 0.49
NEFM-205ENST00000521540 RNF17Q9BXT8 1623 aaKnown RBP18.09■□□□□ 0.49
NEFM-205ENST00000521540 PRDM15P57071 1507 aaPredicted RBP18.08■□□□□ 0.49
NEFM-205ENST00000521540 BRD4O60885 1362 aaPredicted RBP18.07■□□□□ 0.48
NEFM-205ENST00000521540 MROH1Q8NDA8 1641 aa18.06■□□□□ 0.48
NEFM-205ENST00000521540 SMG6Q86US8 1419 aaKnown RBP18.06■□□□□ 0.48
NEFM-205ENST00000521540 KIF3BO15066 747 aa18.05■□□□□ 0.48
NEFM-205ENST00000521540 STAC3Q96MF2 364 aa18.05■□□□□ 0.48
NEFM-205ENST00000521540 PPP4R2Q9NY27 417 aa18.05■□□□□ 0.48
NEFM-205ENST00000521540 MYBBP1AQ9BQG0 1328 aaKnown RBP18.04■□□□□ 0.48
NEFM-205ENST00000521540 TMC1Q8TDI8 760 aa18.03■□□□□ 0.48
NEFM-205ENST00000521540 WASHC2CQ9Y4E1 1318 aa18.03■□□□□ 0.48
NEFM-205ENST00000521540 PNISRQ8TF01 805 aaKnown RBP18.03■□□□□ 0.48
NEFM-205ENST00000521540 ADAMTSL3P82987 1691 aa18.02■□□□□ 0.48
NEFM-205ENST00000521540 VWDEQ8N2E2 1590 aa18.02■□□□□ 0.48
NEFM-205ENST00000521540 RGL3Q3MIN7 710 aa18.01■□□□□ 0.47
NEFM-205ENST00000521540 TRPM2O94759 1503 aa18.01■□□□□ 0.47
NEFM-205ENST00000521540 LRPPRCP42704 1394 aaKnown RBP18■□□□□ 0.47
NEFM-205ENST00000521540 MLECQ14165 292 aa18■□□□□ 0.47
NEFM-205ENST00000521540 CEP152O94986 1710 aa18■□□□□ 0.47
NEFM-205ENST00000521540 TET3O43151 1660 aa18■□□□□ 0.47
NEFM-205ENST00000521540 GGT6Q6P531 493 aa17.99■□□□□ 0.47
NEFM-205ENST00000521540 FER1L4A9Z1Z3 1794 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms