RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 PTPREP23469 700 aa8.47□□□□□ -1.05
VPS13B-208ENST00000521037 RGS20O76081 388 aa8.46□□□□□ -1.06
VPS13B-208ENST00000521037 ZDHHC16Q969W1 377 aa8.46□□□□□ -1.06
VPS13B-208ENST00000521037 MFSD10Q14728 455 aa8.45□□□□□ -1.06
VPS13B-208ENST00000521037 ATAD2BQ9ULI0 1458 aa8.45□□□□□ -1.06
VPS13B-208ENST00000521037 EMILIN3Q9NT22 766 aa8.44□□□□□ -1.06
VPS13B-208ENST00000521037 MRPL50Q8N5N7 158 aaKnown RBP8.42□□□□□ -1.06
VPS13B-208ENST00000521037 WNT2BQ93097 391 aa8.42□□□□□ -1.06
VPS13B-208ENST00000521037 LARP6Q9BRS8 491 aaKnown RBP8.42□□□□□ -1.06
VPS13B-208ENST00000521037 PCDHGA10Q9Y5H3 936 aa8.42□□□□□ -1.06
VPS13B-208ENST00000521037 A0A0G2JS52 829 aa8.41□□□□□ -1.06
VPS13B-208ENST00000521037 BAZ1AQ9NRL2 1556 aaPredicted RBP8.4□□□□□ -1.06
VPS13B-208ENST00000521037 DDX27Q96GQ7 796 aaKnown RBP8.4□□□□□ -1.06
VPS13B-208ENST00000521037 SMARCA2P51531 1590 aa8.39□□□□□ -1.07
VPS13B-208ENST00000521037 HMGXB3Q12766 1538 aa8.39□□□□□ -1.07
VPS13B-208ENST00000521037 COL9A1P20849 921 aa8.39□□□□□ -1.07
VPS13B-208ENST00000521037 KIF21AQ7Z4S6 1674 aa8.39□□□□□ -1.07
VPS13B-208ENST00000521037 RIMBP3CA6NJZ7 1639 aa8.39□□□□□ -1.07
VPS13B-208ENST00000521037 RIMBP3BA6NNM3 1639 aa8.39□□□□□ -1.07
VPS13B-208ENST00000521037 RIMBP3Q9UFD9 1639 aa8.39□□□□□ -1.07
VPS13B-208ENST00000521037 RABGEF1Q9UJ41 708 aa8.38□□□□□ -1.07
VPS13B-208ENST00000521037 PPP1R3GB7ZBB8 358 aa8.37□□□□□ -1.07
VPS13B-208ENST00000521037 MAP3K9P80192 1104 aa8.37□□□□□ -1.07
VPS13B-208ENST00000521037 NBPF3Q9H094 633 aa8.37□□□□□ -1.07
VPS13B-208ENST00000521037 ITGBL1O95965 494 aaPredicted RBP8.36□□□□□ -1.07
VPS13B-208ENST00000521037 PROX2Q3B8N5 592 aa8.36□□□□□ -1.07
VPS13B-208ENST00000521037 CADPS2Q86UW7 1296 aa8.36□□□□□ -1.07
VPS13B-208ENST00000521037 LAMC3Q9Y6N6 1575 aa8.35□□□□□ -1.07
VPS13B-208ENST00000521037 WDR62O43379 1518 aa8.35□□□□□ -1.07
VPS13B-208ENST00000521037 GOLGA8CPA6NN73 597 aa8.35□□□□□ -1.07
VPS13B-208ENST00000521037 PHF14O94880 888 aa8.33□□□□□ -1.08
VPS13B-208ENST00000521037 CAMK2BQ13554 666 aa8.32□□□□□ -1.08
VPS13B-208ENST00000521037 LAPTM4BQ86VI4 370 aa8.32□□□□□ -1.08
VPS13B-208ENST00000521037 FBXW7Q969H0 707 aa8.32□□□□□ -1.08
VPS13B-208ENST00000521037 ARHGEF11O15085 1522 aa8.32□□□□□ -1.08
VPS13B-208ENST00000521037 SOWAHBA6NEL2 793 aa8.31□□□□□ -1.08
VPS13B-208ENST00000521037 ONECUT3O60422 494 aaPredicted RBP8.31□□□□□ -1.08
VPS13B-208ENST00000521037 TYW1BQ6NUM6 668 aa8.31□□□□□ -1.08
VPS13B-208ENST00000521037 IRX2Q9BZI1 471 aaPredicted RBP8.31□□□□□ -1.08
VPS13B-208ENST00000521037 BCAMP50895 628 aa8.3□□□□□ -1.08
VPS13B-208ENST00000521037 KIAA1468Q9P260 1216 aa8.3□□□□□ -1.08
VPS13B-208ENST00000521037 MRC2Q9UBG0 1479 aa8.3□□□□□ -1.08
VPS13B-208ENST00000521037 C6orf132Q5T0Z8 1188 aa8.29□□□□□ -1.08
VPS13B-208ENST00000521037 ANKK1Q8NFD2 765 aa8.29□□□□□ -1.08
VPS13B-208ENST00000521037 ZFRQ96KR1 1074 aaKnown RBP8.29□□□□□ -1.08
VPS13B-208ENST00000521037 PDS5BQ9NTI5 1447 aa8.28□□□□□ -1.08
VPS13B-208ENST00000521037 WBP1LQ9NX94 342 aa8.27□□□□□ -1.09
VPS13B-208ENST00000521037 SMARCA4P51532 1647 aa8.25□□□□□ -1.09
VPS13B-208ENST00000521037 NYAP1Q6ZVC0 841 aa8.25□□□□□ -1.09
VPS13B-208ENST00000521037 EPAS1Q99814 870 aa8.25□□□□□ -1.09
VPS13B-208ENST00000521037 PEG3Q9GZU2 1588 aa8.25□□□□□ -1.09
VPS13B-208ENST00000521037 ARAP1Q96P48 1450 aa8.25□□□□□ -1.09
VPS13B-208ENST00000521037 TRIM6-TRIM34B2RNG4 842 aa8.23□□□□□ -1.09
VPS13B-208ENST00000521037 BAZ1BQ9UIG0 1483 aaKnown RBP8.22□□□□□ -1.09
VPS13B-208ENST00000521037 DPYSL4O14531 572 aa8.22□□□□□ -1.09
VPS13B-208ENST00000521037 SEPT9Q9UHD8 586 aaPredicted RBP8.22□□□□□ -1.09
VPS13B-208ENST00000521037 CADPSQ9ULU8 1353 aa8.22□□□□□ -1.09
VPS13B-208ENST00000521037 FAM98CQ17RN3 349 aaKnown RBP8.21□□□□□ -1.1
VPS13B-208ENST00000521037 KCNC4Q03721 635 aa8.2□□□□□ -1.1
VPS13B-208ENST00000521037 CYB5RLQ6IPT4 315 aa8.2□□□□□ -1.1
VPS13B-208ENST00000521037 LCE2BO14633 110 aa8.19□□□□□ -1.1
VPS13B-208ENST00000521037 TSKSQ9UJT2 592 aa8.19□□□□□ -1.1
VPS13B-208ENST00000521037 TSR3Q9UJK0 312 aaKnown RBP8.18□□□□□ -1.1
VPS13B-208ENST00000521037 DDX12PQ92771 950 aa8.17□□□□□ -1.1
VPS13B-208ENST00000521037 RBM33Q96EV2 1170 aaKnown RBP8.17□□□□□ -1.1
VPS13B-208ENST00000521037 EN1Q05925 392 aaPredicted RBP8.16□□□□□ -1.1
VPS13B-208ENST00000521037 URB2Q14146 1524 aaKnown RBP8.16□□□□□ -1.1
VPS13B-208ENST00000521037 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.16□□□□□ -1.1
VPS13B-208ENST00000521037 C3orf80F5H4A9 247 aa8.15□□□□□ -1.1
VPS13B-208ENST00000521037 TSR1Q2NL82 804 aaKnown RBP8.15□□□□□ -1.1
VPS13B-208ENST00000521037 FAM198AQ9UFP1 575 aa8.15□□□□□ -1.1
VPS13B-208ENST00000521037 HPS5Q9UPZ3 1129 aa8.15□□□□□ -1.1
VPS13B-208ENST00000521037 ZNF608Q9ULD9 1512 aaPredicted RBP8.14□□□□□ -1.11
VPS13B-208ENST00000521037 PRIM1P49642 420 aaKnown RBP8.14□□□□□ -1.11
VPS13B-208ENST00000521037 PDIA6Q15084 440 aa8.14□□□□□ -1.11
VPS13B-208ENST00000521037 TJAP1Q5JTD0 557 aa8.14□□□□□ -1.11
VPS13B-208ENST00000521037 LRCH3Q96II8 777 aa8.14□□□□□ -1.11
VPS13B-208ENST00000521037 PACS2Q86VP3 889 aa8.12□□□□□ -1.11
VPS13B-208ENST00000521037 Q6ZNB5 142 aa8.11□□□□□ -1.11
VPS13B-208ENST00000521037 FANCD2Q9BXW9 1451 aa8.11□□□□□ -1.11
VPS13B-208ENST00000521037 CEP164Q9UPV0 1460 aa8.11□□□□□ -1.11
VPS13B-208ENST00000521037 MROH2BQ7Z745 1585 aa8.1□□□□□ -1.11
VPS13B-208ENST00000521037 PRSS12P56730 875 aa8.09□□□□□ -1.11
VPS13B-208ENST00000521037 NBR1Q14596 966 aa8.09□□□□□ -1.11
VPS13B-208ENST00000521037 CDCA7LQ96GN5 454 aa8.09□□□□□ -1.11
VPS13B-208ENST00000521037 ARIH1Q9Y4X5 557 aaPredicted RBP8.09□□□□□ -1.11
VPS13B-208ENST00000521037 SPDYE16A6NNV3 312 aaPredicted RBP8.08□□□□□ -1.12
VPS13B-208ENST00000521037 SMAPO00193 183 aa8.08□□□□□ -1.12
VPS13B-208ENST00000521037 MAP3K7O43318 606 aa8.08□□□□□ -1.12
VPS13B-208ENST00000521037 PPP4CP60510 307 aa8.08□□□□□ -1.12
VPS13B-208ENST00000521037 SAMD7Q7Z3H4 446 aa8.08□□□□□ -1.12
VPS13B-208ENST00000521037 LAPTM4AQ15012 233 aa8.07□□□□□ -1.12
VPS13B-208ENST00000521037 RSF1Q96T23 1441 aaPredicted RBP8.06□□□□□ -1.12
VPS13B-208ENST00000521037 BBXQ8WY36 941 aaPredicted RBP8.05□□□□□ -1.12
VPS13B-208ENST00000521037 TATDN2Q93075 761 aa8.05□□□□□ -1.12
VPS13B-208ENST00000521037 CFTRP13569 1480 aa8.05□□□□□ -1.12
VPS13B-208ENST00000521037 GFRA3O60609 400 aa8.04□□□□□ -1.12
VPS13B-208ENST00000521037 OSBPP22059 807 aa8.04□□□□□ -1.12
VPS13B-208ENST00000521037 TRAF7Q6Q0C0 670 aa8.04□□□□□ -1.12
VPS13B-208ENST00000521037 CERKQ8TCT0 537 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms