RNA–Protein interactions for RNA: ENST00000520947.1

PTPN12-214, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 5

Gene PTPN12, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-214ENST00000520947 SEMA3EO15041 775 aa12.2□□□□□ -0.46
PTPN12-214ENST00000520947 PTPREP23469 700 aa12.2□□□□□ -0.46
PTPN12-214ENST00000520947 MLLT3P42568 568 aaPredicted RBP12.2□□□□□ -0.46
PTPN12-214ENST00000520947 LSM11P83369 360 aaKnown RBP eCLIP12.2□□□□□ -0.46
PTPN12-214ENST00000520947 DMRTA1Q5VZB9 504 aa12.2□□□□□ -0.46
PTPN12-214ENST00000520947 KCNH8Q96L42 1107 aa12.2□□□□□ -0.46
PTPN12-214ENST00000520947 RNF166Q96A37 237 aaPredicted RBP12.18□□□□□ -0.46
PTPN12-214ENST00000520947 MYT1LQ9UL68 1186 aa12.17□□□□□ -0.46
PTPN12-214ENST00000520947 MAP3K7O43318 606 aa12.16□□□□□ -0.46
PTPN12-214ENST00000520947 PRIM1P49642 420 aaKnown RBP12.16□□□□□ -0.46
PTPN12-214ENST00000520947 OSBPP22059 807 aa12.15□□□□□ -0.46
PTPN12-214ENST00000520947 EN1Q05925 392 aaPredicted RBP12.15□□□□□ -0.46
PTPN12-214ENST00000520947 TSR1Q2NL82 804 aaKnown RBP12.14□□□□□ -0.47
PTPN12-214ENST00000520947 C6orf132Q5T0Z8 1188 aa12.14□□□□□ -0.47
PTPN12-214ENST00000520947 COL9A1P20849 921 aa12.12□□□□□ -0.47
PTPN12-214ENST00000520947 ADGRD1Q6QNK2 874 aa12.11□□□□□ -0.47
PTPN12-214ENST00000520947 PPP1R3GB7ZBB8 358 aa12.1□□□□□ -0.47
PTPN12-214ENST00000520947 TESPA1A2RU30 521 aaPredicted RBP12.08□□□□□ -0.48
PTPN12-214ENST00000520947 ZBED2Q9BTP6 218 aa12.08□□□□□ -0.48
PTPN12-214ENST00000520947 CDHR5Q9HBB8 845 aa12.07□□□□□ -0.48
PTPN12-214ENST00000520947 VPS9D1Q9Y2B5 631 aa12.07□□□□□ -0.48
PTPN12-214ENST00000520947 TK2O00142 265 aa12.06□□□□□ -0.48
PTPN12-214ENST00000520947 PROX2Q3B8N5 592 aa12.06□□□□□ -0.48
PTPN12-214ENST00000520947 SMYD5Q6GMV2 418 aa12.02□□□□□ -0.49
PTPN12-214ENST00000520947 SLC4A5Q9BY07 1137 aa12.02□□□□□ -0.49
PTPN12-214ENST00000520947 NUTM2FA1L443 756 aa12.01□□□□□ -0.49
PTPN12-214ENST00000520947 HRO43593 1189 aa12.01□□□□□ -0.49
PTPN12-214ENST00000520947 RBM26Q5T8P6 1007 aaKnown RBP12.01□□□□□ -0.49
PTPN12-214ENST00000520947 STAC3Q96MF2 364 aa12□□□□□ -0.49
PTPN12-214ENST00000520947 TRIM6-TRIM34B2RNG4 842 aa11.97□□□□□ -0.49
PTPN12-214ENST00000520947 CERKQ8TCT0 537 aa11.97□□□□□ -0.49
PTPN12-214ENST00000520947 KIAA1468Q9P260 1216 aa11.97□□□□□ -0.49
PTPN12-214ENST00000520947 PRSS12P56730 875 aa11.96□□□□□ -0.49
PTPN12-214ENST00000520947 CDCA7LQ96GN5 454 aa11.96□□□□□ -0.49
PTPN12-214ENST00000520947 NPDC1Q9NQX5 325 aaPredicted RBP11.96□□□□□ -0.49
PTPN12-214ENST00000520947 RABGEF1Q9UJ41 708 aa11.95□□□□□ -0.5
PTPN12-214ENST00000520947 TSKSQ9UJT2 592 aa11.95□□□□□ -0.5
PTPN12-214ENST00000520947 BHMG1C9JSJ3 638 aaPredicted RBP11.94□□□□□ -0.5
PTPN12-214ENST00000520947 NBPF3Q9H094 633 aa11.94□□□□□ -0.5
PTPN12-214ENST00000520947 MRPL50Q8N5N7 158 aaKnown RBP11.93□□□□□ -0.5
PTPN12-214ENST00000520947 FAM198AQ9UFP1 575 aa11.93□□□□□ -0.5
PTPN12-214ENST00000520947 TULP1O00294 542 aaPredicted RBP11.92□□□□□ -0.5
PTPN12-214ENST00000520947 PTGDRQ13258 359 aa11.92□□□□□ -0.5
PTPN12-214ENST00000520947 SEPT9Q9UHD8 586 aaPredicted RBP11.92□□□□□ -0.5
PTPN12-214ENST00000520947 ONECUT3O60422 494 aaPredicted RBP11.91□□□□□ -0.5
PTPN12-214ENST00000520947 PADI6Q6TGC4 694 aa11.91□□□□□ -0.5
PTPN12-214ENST00000520947 PACS2Q86VP3 889 aa11.91□□□□□ -0.5
PTPN12-214ENST00000520947 GOLGA8CPA6NN73 597 aa11.89□□□□□ -0.51
PTPN12-214ENST00000520947 SMAPO00193 183 aa11.88□□□□□ -0.51
PTPN12-214ENST00000520947 FCHSD2O94868 740 aa11.88□□□□□ -0.51
PTPN12-214ENST00000520947 KCTD12Q96CX2 325 aaKnown RBP11.88□□□□□ -0.51
PTPN12-214ENST00000520947 GPIHBP1Q8IV16 184 aa11.87□□□□□ -0.51
PTPN12-214ENST00000520947 C3orf80F5H4A9 247 aa11.86□□□□□ -0.51
PTPN12-214ENST00000520947 RBM27Q9P2N5 1060 aaKnown RBP11.86□□□□□ -0.51
PTPN12-214ENST00000520947 PNMA3Q9UL41 463 aa11.86□□□□□ -0.51
PTPN12-214ENST00000520947 NBPF26B4DH59 902 aa11.84□□□□□ -0.51
PTPN12-214ENST00000520947 NUDT18Q6ZVK8 323 aa11.84□□□□□ -0.51
PTPN12-214ENST00000520947 TATDN2Q93075 761 aa11.84□□□□□ -0.51
PTPN12-214ENST00000520947 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.83□□□□□ -0.52
PTPN12-214ENST00000520947 TTC13Q8NBP0 860 aa11.83□□□□□ -0.52
PTPN12-214ENST00000520947 WNT2BQ93097 391 aa11.83□□□□□ -0.52
PTPN12-214ENST00000520947 GPR37O15354 613 aa11.82□□□□□ -0.52
PTPN12-214ENST00000520947 HIC1Q14526 733 aa11.82□□□□□ -0.52
PTPN12-214ENST00000520947 FAM98CQ17RN3 349 aaKnown RBP11.82□□□□□ -0.52
PTPN12-214ENST00000520947 LAPTM4BQ86VI4 370 aa11.82□□□□□ -0.52
PTPN12-214ENST00000520947 HCSTQ9UBK5 93 aa11.82□□□□□ -0.52
PTPN12-214ENST00000520947 FAM161AQ3B820 660 aa11.81□□□□□ -0.52
PTPN12-214ENST00000520947 LMOD2Q6P5Q4 547 aa11.81□□□□□ -0.52
PTPN12-214ENST00000520947 ZFRQ96KR1 1074 aaKnown RBP11.81□□□□□ -0.52
PTPN12-214ENST00000520947 FECHP22830 423 aa11.8□□□□□ -0.52
PTPN12-214ENST00000520947 GNPATO15228 680 aa11.79□□□□□ -0.52
PTPN12-214ENST00000520947 ANKK1Q8NFD2 765 aa11.79□□□□□ -0.52
PTPN12-214ENST00000520947 PTPN5P54829 565 aa11.77□□□□□ -0.53
PTPN12-214ENST00000520947 BCAMP50895 628 aa11.76□□□□□ -0.53
PTPN12-214ENST00000520947 THSD4Q6ZMP0 1018 aa11.76□□□□□ -0.53
PTPN12-214ENST00000520947 ADGRG1Q9Y653 693 aa11.76□□□□□ -0.53
PTPN12-214ENST00000520947 BCANQ96GW7 911 aa11.74□□□□□ -0.53
PTPN12-214ENST00000520947 EYA1Q99502 592 aa11.74□□□□□ -0.53
PTPN12-214ENST00000520947 SAMD7Q7Z3H4 446 aa11.73□□□□□ -0.53
PTPN12-214ENST00000520947 RBM46Q8TBY0 533 aaKnown RBP11.73□□□□□ -0.53
PTPN12-214ENST00000520947 PLA2G2EQ9NZK7 142 aa11.73□□□□□ -0.53
PTPN12-214ENST00000520947 LRCH3Q96II8 777 aa11.72□□□□□ -0.53
PTPN12-214ENST00000520947 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.72□□□□□ -0.53
PTPN12-214ENST00000520947 SOWAHBA6NEL2 793 aa11.71□□□□□ -0.53
PTPN12-214ENST00000520947 RNF40O75150 1001 aa11.69□□□□□ -0.54
PTPN12-214ENST00000520947 HDGFP51858 240 aaKnown RBP11.69□□□□□ -0.54
PTPN12-214ENST00000520947 OATP04181 439 aa11.68□□□□□ -0.54
PTPN12-214ENST00000520947 SWT1Q5T5J6 900 aaKnown RBP11.68□□□□□ -0.54
PTPN12-214ENST00000520947 RCCD1A6NED2 376 aa11.67□□□□□ -0.54
PTPN12-214ENST00000520947 PXYLP1Q8TE99 480 aa11.67□□□□□ -0.54
PTPN12-214ENST00000520947 HPS5Q9UPZ3 1129 aa11.67□□□□□ -0.54
PTPN12-214ENST00000520947 DNAJB2P25686 324 aa11.66□□□□□ -0.54
PTPN12-214ENST00000520947 METTL3Q86U44 580 aaKnown RBP11.66□□□□□ -0.54
PTPN12-214ENST00000520947 ZC3H15Q8WU90 426 aaKnown RBP11.66□□□□□ -0.54
PTPN12-214ENST00000520947 WBP1LQ9NX94 342 aa11.66□□□□□ -0.54
PTPN12-214ENST00000520947 MAP2K5Q13163 448 aa11.64□□□□□ -0.55
PTPN12-214ENST00000520947 NLRP7Q8WX94 980 aa11.64□□□□□ -0.55
PTPN12-214ENST00000520947 TSR3Q9UJK0 312 aaKnown RBP11.64□□□□□ -0.55
PTPN12-214ENST00000520947 PPP4CP60510 307 aa11.63□□□□□ -0.55
PTPN12-214ENST00000520947 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms