RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 PANK3Q9H999 370 aa15.3■□□□□ 0.04
CLK4-206ENST00000520878 KNSTRNQ9Y448 316 aa15.3■□□□□ 0.04
CLK4-206ENST00000520878 STAG3Q9UJ98 1225 aa15.29■□□□□ 0.04
CLK4-206ENST00000520878 PLPPR3Q6T4P5 718 aa15.28■□□□□ 0.04
CLK4-206ENST00000520878 WASHC2CQ9Y4E1 1318 aa15.28■□□□□ 0.04
CLK4-206ENST00000520878 MLECQ14165 292 aa15.28■□□□□ 0.04
CLK4-206ENST00000520878 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.27■□□□□ 0.04
CLK4-206ENST00000520878 SHANK2Q9UPX8 1470 aa15.26■□□□□ 0.03
CLK4-206ENST00000520878 CDC42BPAQ5VT25 1732 aa15.26■□□□□ 0.03
CLK4-206ENST00000520878 SAFB2Q14151 953 aaKnown RBP eCLIP15.26■□□□□ 0.03
CLK4-206ENST00000520878 KDM5BQ9UGL1 1544 aa15.26■□□□□ 0.03
CLK4-206ENST00000520878 FAM135AQ9P2D6 1515 aa15.25■□□□□ 0.03
CLK4-206ENST00000520878 SAMD9LQ8IVG5 1584 aa15.25■□□□□ 0.03
CLK4-206ENST00000520878 TTC37Q6PGP7 1564 aa15.24■□□□□ 0.03
CLK4-206ENST00000520878 CFAP70Q5T0N1 1121 aa15.24■□□□□ 0.03
CLK4-206ENST00000520878 TNNT2P45379 298 aaPredicted RBP15.24■□□□□ 0.03
CLK4-206ENST00000520878 B4GALNT3Q6L9W6 998 aa15.24■□□□□ 0.03
CLK4-206ENST00000520878 KTN1Q86UP2 1357 aaKnown RBP15.23■□□□□ 0.03
CLK4-206ENST00000520878 FANCAO15360 1455 aa15.23■□□□□ 0.03
CLK4-206ENST00000520878 RALBP1Q15311 655 aa15.22■□□□□ 0.03
CLK4-206ENST00000520878 TRAK1Q9UPV9 953 aa15.22■□□□□ 0.03
CLK4-206ENST00000520878 ASXL2Q76L83 1435 aa15.21■□□□□ 0.03
CLK4-206ENST00000520878 WDR43Q15061 677 aaKnown RBP eCLIP15.21■□□□□ 0.03
CLK4-206ENST00000520878 ADGRL1O94910 1474 aa15.21■□□□□ 0.03
CLK4-206ENST00000520878 CDCA8Q53HL2 280 aa15.21■□□□□ 0.03
CLK4-206ENST00000520878 STK26Q9P289 416 aa15.2■□□□□ 0.02
CLK4-206ENST00000520878 ARHGEF12Q9NZN5 1544 aa15.2■□□□□ 0.02
CLK4-206ENST00000520878 ADCY10Q96PN6 1610 aa15.2■□□□□ 0.02
CLK4-206ENST00000520878 ADGBQ8N7X0 1667 aa15.2■□□□□ 0.02
CLK4-206ENST00000520878 FAM69CQ0P6D2 419 aa15.19■□□□□ 0.02
CLK4-206ENST00000520878 ESF1Q9H501 851 aaKnown RBP15.19■□□□□ 0.02
CLK4-206ENST00000520878 MYBBP1AQ9BQG0 1328 aaKnown RBP15.19■□□□□ 0.02
CLK4-206ENST00000520878 ARID4BQ4LE39 1312 aaPredicted RBP15.19■□□□□ 0.02
CLK4-206ENST00000520878 NLRP13Q86W25 1043 aa15.19■□□□□ 0.02
CLK4-206ENST00000520878 SPATA31E1Q6ZUB1 1445 aa15.18■□□□□ 0.02
CLK4-206ENST00000520878 ZBED9Q6R2W3 1325 aa15.18■□□□□ 0.02
CLK4-206ENST00000520878 WDR7Q9Y4E6 1490 aa15.18■□□□□ 0.02
CLK4-206ENST00000520878 TMEM132EQ6IEE7 984 aa15.18■□□□□ 0.02
CLK4-206ENST00000520878 TSHZ2Q9NRE2 1034 aa15.18■□□□□ 0.02
CLK4-206ENST00000520878 CD109Q6YHK3 1445 aa15.17■□□□□ 0.02
CLK4-206ENST00000520878 CCDC136Q96JN2 1154 aa15.17■□□□□ 0.02
CLK4-206ENST00000520878 PNISRQ8TF01 805 aaKnown RBP15.16■□□□□ 0.02
CLK4-206ENST00000520878 ARHGEF5Q12774 1597 aa15.15■□□□□ 0.02
CLK4-206ENST00000520878 DUOX2Q9NRD8 1548 aa15.15■□□□□ 0.02
CLK4-206ENST00000520878 PREX2Q70Z35 1606 aa15.14■□□□□ 0.01
CLK4-206ENST00000520878 RALGAPBQ86X10 1494 aa15.14■□□□□ 0.01
CLK4-206ENST00000520878 CDC42BPBQ9Y5S2 1711 aa15.14■□□□□ 0.01
CLK4-206ENST00000520878 ERICH6Q7L0X2 663 aa15.13■□□□□ 0.01
CLK4-206ENST00000520878 PPP4R2Q9NY27 417 aa15.13■□□□□ 0.01
CLK4-206ENST00000520878 PRAG1Q86YV5 1406 aa15.13■□□□□ 0.01
CLK4-206ENST00000520878 NUDCQ9Y266 331 aa15.12■□□□□ 0.01
CLK4-206ENST00000520878 ADGRF5Q8IZF2 1346 aa15.12■□□□□ 0.01
CLK4-206ENST00000520878 DISP3Q9P2K9 1392 aa15.12■□□□□ 0.01
CLK4-206ENST00000520878 ZCCHC11Q5TAX3 1644 aaKnown RBP15.12■□□□□ 0.01
CLK4-206ENST00000520878 DHX29Q7Z478 1369 aaKnown RBP15.11■□□□□ 0.01
CLK4-206ENST00000520878 NEUROD2Q15784 382 aa15.11■□□□□ 0.01
CLK4-206ENST00000520878 ERBINQ96RT1 1412 aa15.11■□□□□ 0.01
CLK4-206ENST00000520878 PLA2R1Q13018 1463 aa15.1■□□□□ 0.01
CLK4-206ENST00000520878 MYO5CQ9NQX4 1742 aa15.1■□□□□ 0.01
CLK4-206ENST00000520878 A2MP01023 1474 aa15.1■□□□□ 0.01
CLK4-206ENST00000520878 TESK2Q96S53 571 aa15.1■□□□□ 0.01
CLK4-206ENST00000520878 UHRF1BP1Q6BDS2 1440 aa15.1■□□□□ 0.01
CLK4-206ENST00000520878 UHRF1BP1LA0JNW5 1464 aa15.09■□□□□ 0.01
CLK4-206ENST00000520878 CCDC146Q8IYE0 955 aa15.08■□□□□ 0.01
CLK4-206ENST00000520878 POGKQ9P215 609 aa15.08■□□□□ 0
CLK4-206ENST00000520878 CROCC2H7BZ55 1655 aa15.08■□□□□ 0
CLK4-206ENST00000520878 EIF3AQ14152 1382 aaKnown RBP15.07■□□□□ 0
CLK4-206ENST00000520878 SRPK2P78362 688 aaKnown RBP15.06■□□□□ 0
CLK4-206ENST00000520878 CDCA7LQ96GN5 454 aa15.06■□□□□ 0
CLK4-206ENST00000520878 CLASP1Q7Z460 1538 aa15.06■□□□□ 0
CLK4-206ENST00000520878 SHROOM2Q13796 1616 aa15.05■□□□□ 0
CLK4-206ENST00000520878 MORC1Q86VD1 984 aa15.05■□□□□ -0
CLK4-206ENST00000520878 BRD4O60885 1362 aaPredicted RBP15.04■□□□□ -0
CLK4-206ENST00000520878 ADAMTS8Q9UP79 889 aa15.04■□□□□ -0
CLK4-206ENST00000520878 RBM19Q9Y4C8 960 aaKnown RBP15.04■□□□□ -0
CLK4-206ENST00000520878 RCAN3Q9UKA8 241 aa15.03■□□□□ -0
CLK4-206ENST00000520878 RTEL1-TNFRSF6BF6WH68 1400 aa15.03■□□□□ -0
CLK4-206ENST00000520878 ABCC1P33527 1531 aa15.03■□□□□ -0
CLK4-206ENST00000520878 STAC3Q96MF2 364 aa15.03■□□□□ -0
CLK4-206ENST00000520878 CENPJQ9HC77 1338 aaPredicted RBP15.03■□□□□ -0
CLK4-206ENST00000520878 VGFO15240 615 aaPredicted RBP15.02■□□□□ -0
CLK4-206ENST00000520878 SLC12A5Q9H2X9 1139 aa15.02□□□□□ -0.01
CLK4-206ENST00000520878 PLIN1O60240 522 aa15.02□□□□□ -0.01
CLK4-206ENST00000520878 PER1O15534 1290 aaPredicted RBP15.01□□□□□ -0.01
CLK4-206ENST00000520878 PPP2R1AP30153 589 aa15.01□□□□□ -0.01
CLK4-206ENST00000520878 FBXO31Q5XUX0 539 aaPredicted RBP15.01□□□□□ -0.01
CLK4-206ENST00000520878 PPM1GO15355 546 aaPredicted RBP15□□□□□ -0.01
CLK4-206ENST00000520878 ATP7AQ04656 1500 aa15□□□□□ -0.01
CLK4-206ENST00000520878 SLC24A1O60721 1099 aa15□□□□□ -0.01
CLK4-206ENST00000520878 CANXP27824 592 aaKnown RBP15□□□□□ -0.01
CLK4-206ENST00000520878 IDI1Q13907 227 aa15□□□□□ -0.01
CLK4-206ENST00000520878 KDM5DQ9BY66 1539 aa15□□□□□ -0.01
CLK4-206ENST00000520878 CFAP65Q6ZU64 1925 aaKnown RBP14.99□□□□□ -0.01
CLK4-206ENST00000520878 BCORL1Q5H9F3 1711 aa14.99□□□□□ -0.01
CLK4-206ENST00000520878 MINK1Q8N4C8 1332 aaPredicted RBP14.99□□□□□ -0.01
CLK4-206ENST00000520878 KDM5CP41229 1560 aa14.98□□□□□ -0.01
CLK4-206ENST00000520878 CABP2Q9NPB3 220 aa14.98□□□□□ -0.01
CLK4-206ENST00000520878 ZNF518AQ6AHZ1 1483 aa14.98□□□□□ -0.01
CLK4-206ENST00000520878 MAST1Q9Y2H9 1570 aa14.98□□□□□ -0.01
CLK4-206ENST00000520878 NOS1P29475 1434 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms