RNA–Protein interactions for RNA: ENST00000520752.1

SHPRH-208, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 4

Gene SHPRH, Length 821 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-208ENST00000520752 MYT1LQ9UL68 1186 aa12.8□□□□□ -0.36
SHPRH-208ENST00000520752 EN1Q05925 392 aaPredicted RBP12.79□□□□□ -0.36
SHPRH-208ENST00000520752 NUTM2FA1L443 756 aa12.78□□□□□ -0.36
SHPRH-208ENST00000520752 BARGINQ6ZT62 677 aa12.78□□□□□ -0.36
SHPRH-208ENST00000520752 GPR37O15354 613 aa12.77□□□□□ -0.37
SHPRH-208ENST00000520752 LHX6Q9UPM6 363 aa12.77□□□□□ -0.37
SHPRH-208ENST00000520752 PSDA5PKW4 1024 aaPredicted RBP12.76□□□□□ -0.37
SHPRH-208ENST00000520752 ZNF454Q8N9F8 522 aa12.75□□□□□ -0.37
SHPRH-208ENST00000520752 ZDHHC16Q969W1 377 aa12.75□□□□□ -0.37
SHPRH-208ENST00000520752 DAXXQ9UER7 740 aaPredicted RBP12.74□□□□□ -0.37
SHPRH-208ENST00000520752 FCHSD2O94868 740 aa12.73□□□□□ -0.37
SHPRH-208ENST00000520752 DIEXFQ68CQ4 756 aaKnown RBP12.73□□□□□ -0.37
SHPRH-208ENST00000520752 MAP3K7O43318 606 aa12.72□□□□□ -0.37
SHPRH-208ENST00000520752 PTGDRQ13258 359 aa12.71□□□□□ -0.37
SHPRH-208ENST00000520752 RBM33Q96EV2 1170 aaKnown RBP12.71□□□□□ -0.37
SHPRH-208ENST00000520752 HIC1Q14526 733 aa12.7□□□□□ -0.38
SHPRH-208ENST00000520752 PPP4R3BQ5MIZ7 849 aa12.69□□□□□ -0.38
SHPRH-208ENST00000520752 NPDC1Q9NQX5 325 aaPredicted RBP12.69□□□□□ -0.38
SHPRH-208ENST00000520752 GNPATO15228 680 aa12.68□□□□□ -0.38
SHPRH-208ENST00000520752 ST18O60284 1047 aa12.68□□□□□ -0.38
SHPRH-208ENST00000520752 C6orf132Q5T0Z8 1188 aa12.68□□□□□ -0.38
SHPRH-208ENST00000520752 ADAM33Q9BZ11 813 aa12.68□□□□□ -0.38
SHPRH-208ENST00000520752 SLC24A3Q9HC58 644 aa12.68□□□□□ -0.38
SHPRH-208ENST00000520752 TSR1Q2NL82 804 aaKnown RBP12.67□□□□□ -0.38
SHPRH-208ENST00000520752 CDHR5Q9HBB8 845 aa12.67□□□□□ -0.38
SHPRH-208ENST00000520752 KRI1Q8N9T8 703 aaKnown RBP12.66□□□□□ -0.38
SHPRH-208ENST00000520752 CERKQ8TCT0 537 aa12.66□□□□□ -0.38
SHPRH-208ENST00000520752 BCL2L12Q9HB09 334 aa12.65□□□□□ -0.38
SHPRH-208ENST00000520752 MINK1Q8N4C8 1332 aaPredicted RBP12.63□□□□□ -0.39
SHPRH-208ENST00000520752 ERICH6BQ5W0A0 696 aa12.63□□□□□ -0.39
SHPRH-208ENST00000520752 AK7Q96M32 723 aa12.63□□□□□ -0.39
SHPRH-208ENST00000520752 UBE2Q2Q8WVN8 375 aa12.62□□□□□ -0.39
SHPRH-208ENST00000520752 FECHP22830 423 aa12.61□□□□□ -0.39
SHPRH-208ENST00000520752 MAP2K5Q13163 448 aa12.61□□□□□ -0.39
SHPRH-208ENST00000520752 IRF6O14896 467 aa12.6□□□□□ -0.39
SHPRH-208ENST00000520752 FAM163AQ96GL9 167 aaPredicted RBP12.6□□□□□ -0.39
SHPRH-208ENST00000520752 ERBB3P21860 1342 aa12.59□□□□□ -0.39
SHPRH-208ENST00000520752 PTPREP23469 700 aa12.58□□□□□ -0.4
SHPRH-208ENST00000520752 EMP3P54852 163 aa12.57□□□□□ -0.4
SHPRH-208ENST00000520752 RBM27Q9P2N5 1060 aaKnown RBP12.57□□□□□ -0.4
SHPRH-208ENST00000520752 EIF5BO60841 1220 aaKnown RBP12.55□□□□□ -0.4
SHPRH-208ENST00000520752 VARS2Q5ST30 1063 aaKnown RBP12.55□□□□□ -0.4
SHPRH-208ENST00000520752 MARVELD3Q96A59 401 aa12.55□□□□□ -0.4
SHPRH-208ENST00000520752 PPP1R3GB7ZBB8 358 aa12.54□□□□□ -0.4
SHPRH-208ENST00000520752 TRIM66O15016 1216 aa12.54□□□□□ -0.4
SHPRH-208ENST00000520752 COL9A1P20849 921 aa12.54□□□□□ -0.4
SHPRH-208ENST00000520752 PRSS12P56730 875 aa12.54□□□□□ -0.4
SHPRH-208ENST00000520752 TTC13Q8NBP0 860 aa12.54□□□□□ -0.4
SHPRH-208ENST00000520752 LCE2DQ5TA82 110 aaPredicted RBP12.53□□□□□ -0.4
SHPRH-208ENST00000520752 CCDC102AQ96A19 550 aa12.53□□□□□ -0.4
SHPRH-208ENST00000520752 SUPT5HO00267 1087 aaKnown RBP12.51□□□□□ -0.41
SHPRH-208ENST00000520752 CDCA7LQ96GN5 454 aa12.51□□□□□ -0.41
SHPRH-208ENST00000520752 BRPF1P55201 1214 aaPredicted RBP12.5□□□□□ -0.41
SHPRH-208ENST00000520752 PADI6Q6TGC4 694 aa12.5□□□□□ -0.41
SHPRH-208ENST00000520752 FAM205CA6NFA0 338 aa12.49□□□□□ -0.41
SHPRH-208ENST00000520752 ZNF687Q8N1G0 1237 aa12.49□□□□□ -0.41
SHPRH-208ENST00000520752 KCNH8Q96L42 1107 aa12.49□□□□□ -0.41
SHPRH-208ENST00000520752 KCNK17Q96T54 332 aa12.49□□□□□ -0.41
SHPRH-208ENST00000520752 ARHGAP33O14559 1287 aa12.48□□□□□ -0.41
SHPRH-208ENST00000520752 PBX2P40425 430 aa12.47□□□□□ -0.41
SHPRH-208ENST00000520752 POTEEQ6S8J3 1075 aa12.47□□□□□ -0.41
SHPRH-208ENST00000520752 ONECUT3O60422 494 aaPredicted RBP12.46□□□□□ -0.41
SHPRH-208ENST00000520752 OATP04181 439 aa12.46□□□□□ -0.41
SHPRH-208ENST00000520752 PDE4DQ08499 809 aa12.46□□□□□ -0.41
SHPRH-208ENST00000520752 AMHR2Q16671 573 aa12.46□□□□□ -0.41
SHPRH-208ENST00000520752 ADGRG1Q9Y653 693 aa12.46□□□□□ -0.41
SHPRH-208ENST00000520752 POTEB3A0JP26 581 aa12.45□□□□□ -0.42
SHPRH-208ENST00000520752 NEUROD2Q15784 382 aa12.45□□□□□ -0.42
SHPRH-208ENST00000520752 POTEBQ6S5H4 581 aa12.45□□□□□ -0.42
SHPRH-208ENST00000520752 HS3ST6Q96QI5 342 aa12.45□□□□□ -0.42
SHPRH-208ENST00000520752 SUPT16HQ9Y5B9 1047 aaKnown RBP12.45□□□□□ -0.42
SHPRH-208ENST00000520752 PSEN2P49810 448 aa12.44□□□□□ -0.42
SHPRH-208ENST00000520752 FAM198AQ9UFP1 575 aa12.44□□□□□ -0.42
SHPRH-208ENST00000520752 TSKSQ9UJT2 592 aa12.44□□□□□ -0.42
SHPRH-208ENST00000520752 TRIM6-TRIM34B2RNG4 842 aa12.43□□□□□ -0.42
SHPRH-208ENST00000520752 ZBED2Q9BTP6 218 aa12.43□□□□□ -0.42
SHPRH-208ENST00000520752 SLC4A5Q9BY07 1137 aa12.43□□□□□ -0.42
SHPRH-208ENST00000520752 METTL3Q86U44 580 aaKnown RBP12.42□□□□□ -0.42
SHPRH-208ENST00000520752 PXYLP1Q8TE99 480 aa12.41□□□□□ -0.42
SHPRH-208ENST00000520752 FAM161AQ3B820 660 aa12.4□□□□□ -0.42
SHPRH-208ENST00000520752 PACS2Q86VP3 889 aa12.4□□□□□ -0.42
SHPRH-208ENST00000520752 AXIN2Q9Y2T1 843 aa12.4□□□□□ -0.42
SHPRH-208ENST00000520752 PROX2Q3B8N5 592 aa12.39□□□□□ -0.43
SHPRH-208ENST00000520752 RBM46Q8TBY0 533 aaKnown RBP12.39□□□□□ -0.43
SHPRH-208ENST00000520752 PHOX2BQ99453 314 aa12.39□□□□□ -0.43
SHPRH-208ENST00000520752 DMRTA1Q5VZB9 504 aa12.38□□□□□ -0.43
SHPRH-208ENST00000520752 EYA1Q99502 592 aa12.38□□□□□ -0.43
SHPRH-208ENST00000520752 NBPF26B4DH59 902 aa12.36□□□□□ -0.43
SHPRH-208ENST00000520752 PARP9Q8IXQ6 854 aa12.36□□□□□ -0.43
SHPRH-208ENST00000520752 TATDN2Q93075 761 aa12.36□□□□□ -0.43
SHPRH-208ENST00000520752 TMUB1Q9BVT8 246 aa12.36□□□□□ -0.43
SHPRH-208ENST00000520752 KDM4CQ9H3R0 1056 aa12.36□□□□□ -0.43
SHPRH-208ENST00000520752 GPBP1L1Q9HC44 474 aaPredicted RBP12.36□□□□□ -0.43
SHPRH-208ENST00000520752 NUDT18Q6ZVK8 323 aa12.35□□□□□ -0.43
SHPRH-208ENST00000520752 KIAA1468Q9P260 1216 aa12.35□□□□□ -0.43
SHPRH-208ENST00000520752 RABGEF1Q9UJ41 708 aa12.35□□□□□ -0.43
SHPRH-208ENST00000520752 C3orf80F5H4A9 247 aa12.34□□□□□ -0.43
SHPRH-208ENST00000520752 VPS9D1Q9Y2B5 631 aa12.34□□□□□ -0.43
SHPRH-208ENST00000520752 CLCN1P35523 988 aa12.33□□□□□ -0.44
SHPRH-208ENST00000520752 TTLL12Q14166 644 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms