RNA–Protein interactions for RNA: ENST00000520619.1

SNHG6-202, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 3 BASIC

Gene SNHG6, Length 479 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-202ENST00000520619 PTPREP23469 700 aa9.77□□□□□ -0.85
SNHG6-202ENST00000520619 PSEN2P49810 448 aa9.77□□□□□ -0.85
SNHG6-202ENST00000520619 KCNK17Q96T54 332 aa9.77□□□□□ -0.85
SNHG6-202ENST00000520619 MAP3K7O43318 606 aa9.75□□□□□ -0.85
SNHG6-202ENST00000520619 C6orf132Q5T0Z8 1188 aa9.75□□□□□ -0.85
SNHG6-202ENST00000520619 TSR1Q2NL82 804 aaKnown RBP9.74□□□□□ -0.85
SNHG6-202ENST00000520619 DMRTA1Q5VZB9 504 aa9.74□□□□□ -0.85
SNHG6-202ENST00000520619 KCNH8Q96L42 1107 aa9.74□□□□□ -0.85
SNHG6-202ENST00000520619 LSM11P83369 360 aaKnown RBP eCLIP9.73□□□□□ -0.85
SNHG6-202ENST00000520619 SMYD5Q6GMV2 418 aa9.72□□□□□ -0.85
SNHG6-202ENST00000520619 COL9A1P20849 921 aa9.71□□□□□ -0.86
SNHG6-202ENST00000520619 ANKRD13DQ6ZTN6 518 aa9.71□□□□□ -0.86
SNHG6-202ENST00000520619 PPP1R3GB7ZBB8 358 aa9.7□□□□□ -0.86
SNHG6-202ENST00000520619 CDHR5Q9HBB8 845 aa9.69□□□□□ -0.86
SNHG6-202ENST00000520619 RBM26Q5T8P6 1007 aaKnown RBP9.68□□□□□ -0.86
SNHG6-202ENST00000520619 ADGRD1Q6QNK2 874 aa9.67□□□□□ -0.86
SNHG6-202ENST00000520619 ZBED2Q9BTP6 218 aa9.67□□□□□ -0.86
SNHG6-202ENST00000520619 SLC4A5Q9BY07 1137 aa9.67□□□□□ -0.86
SNHG6-202ENST00000520619 TK2O00142 265 aa9.66□□□□□ -0.86
SNHG6-202ENST00000520619 CERKQ8TCT0 537 aa9.65□□□□□ -0.86
SNHG6-202ENST00000520619 VPS9D1Q9Y2B5 631 aa9.65□□□□□ -0.86
SNHG6-202ENST00000520619 NUTM2FA1L443 756 aa9.64□□□□□ -0.87
SNHG6-202ENST00000520619 TULP1O00294 542 aaPredicted RBP9.64□□□□□ -0.87
SNHG6-202ENST00000520619 NPDC1Q9NQX5 325 aaPredicted RBP9.64□□□□□ -0.87
SNHG6-202ENST00000520619 PROX2Q3B8N5 592 aa9.63□□□□□ -0.87
SNHG6-202ENST00000520619 SPNS2Q8IVW8 549 aa9.63□□□□□ -0.87
SNHG6-202ENST00000520619 PTGDRQ13258 359 aa9.62□□□□□ -0.87
SNHG6-202ENST00000520619 HRO43593 1189 aa9.61□□□□□ -0.87
SNHG6-202ENST00000520619 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.61□□□□□ -0.87
SNHG6-202ENST00000520619 CDCA7LQ96GN5 454 aa9.61□□□□□ -0.87
SNHG6-202ENST00000520619 BCANQ96GW7 911 aa9.61□□□□□ -0.87
SNHG6-202ENST00000520619 TRIM6-TRIM34B2RNG4 842 aa9.6□□□□□ -0.87
SNHG6-202ENST00000520619 PRSS12P56730 875 aa9.6□□□□□ -0.87
SNHG6-202ENST00000520619 ONECUT3O60422 494 aaPredicted RBP9.59□□□□□ -0.87
SNHG6-202ENST00000520619 TSKSQ9UJT2 592 aa9.59□□□□□ -0.87
SNHG6-202ENST00000520619 BHMG1C9JSJ3 638 aaPredicted RBP9.58□□□□□ -0.88
SNHG6-202ENST00000520619 FCHSD2O94868 740 aa9.58□□□□□ -0.88
SNHG6-202ENST00000520619 KIAA1468Q9P260 1216 aa9.58□□□□□ -0.88
SNHG6-202ENST00000520619 RABGEF1Q9UJ41 708 aa9.58□□□□□ -0.88
SNHG6-202ENST00000520619 GPR37O15354 613 aa9.57□□□□□ -0.88
SNHG6-202ENST00000520619 LMOD2Q6P5Q4 547 aa9.57□□□□□ -0.88
SNHG6-202ENST00000520619 GPIHBP1Q8IV16 184 aa9.57□□□□□ -0.88
SNHG6-202ENST00000520619 RBM27Q9P2N5 1060 aaKnown RBP9.57□□□□□ -0.88
SNHG6-202ENST00000520619 FAM198AQ9UFP1 575 aa9.57□□□□□ -0.88
SNHG6-202ENST00000520619 PADI6Q6TGC4 694 aa9.56□□□□□ -0.88
SNHG6-202ENST00000520619 TTC13Q8NBP0 860 aa9.56□□□□□ -0.88
SNHG6-202ENST00000520619 HIC1Q14526 733 aa9.54□□□□□ -0.88
SNHG6-202ENST00000520619 PACS2Q86VP3 889 aa9.54□□□□□ -0.88
SNHG6-202ENST00000520619 NBPF3Q9H094 633 aa9.54□□□□□ -0.88
SNHG6-202ENST00000520619 MMRN1Q13201 1228 aa9.53□□□□□ -0.88
SNHG6-202ENST00000520619 STAC3Q96MF2 364 aa9.53□□□□□ -0.88
SNHG6-202ENST00000520619 MYT1LQ9UL68 1186 aa9.53□□□□□ -0.88
SNHG6-202ENST00000520619 GNPATO15228 680 aa9.52□□□□□ -0.89
SNHG6-202ENST00000520619 MRPL50Q8N5N7 158 aaKnown RBP9.52□□□□□ -0.89
SNHG6-202ENST00000520619 C3orf80F5H4A9 247 aa9.51□□□□□ -0.89
SNHG6-202ENST00000520619 SEPT9Q9UHD8 586 aaPredicted RBP9.51□□□□□ -0.89
SNHG6-202ENST00000520619 FECHP22830 423 aa9.5□□□□□ -0.89
SNHG6-202ENST00000520619 TATDN2Q93075 761 aa9.5□□□□□ -0.89
SNHG6-202ENST00000520619 NBPF26B4DH59 902 aa9.49□□□□□ -0.89
SNHG6-202ENST00000520619 SMAPO00193 183 aa9.49□□□□□ -0.89
SNHG6-202ENST00000520619 NUDT18Q6ZVK8 323 aa9.49□□□□□ -0.89
SNHG6-202ENST00000520619 LAPTM4BQ86VI4 370 aa9.49□□□□□ -0.89
SNHG6-202ENST00000520619 PLSCR2Q9NRY7 297 aa9.49□□□□□ -0.89
SNHG6-202ENST00000520619 PNMA3Q9UL41 463 aa9.49□□□□□ -0.89
SNHG6-202ENST00000520619 FAM98CQ17RN3 349 aaKnown RBP9.47□□□□□ -0.89
SNHG6-202ENST00000520619 RNF166Q96A37 237 aaPredicted RBP9.47□□□□□ -0.89
SNHG6-202ENST00000520619 ADGRG1Q9Y653 693 aa9.47□□□□□ -0.89
SNHG6-202ENST00000520619 GOLGA8CPA6NN73 597 aa9.46□□□□□ -0.9
SNHG6-202ENST00000520619 FAM161AQ3B820 660 aa9.46□□□□□ -0.9
SNHG6-202ENST00000520619 ZC3H15Q8WU90 426 aaKnown RBP9.46□□□□□ -0.9
SNHG6-202ENST00000520619 ZFRQ96KR1 1074 aaKnown RBP9.45□□□□□ -0.9
SNHG6-202ENST00000520619 EYA1Q99502 592 aa9.45□□□□□ -0.9
SNHG6-202ENST00000520619 KCTD12Q96CX2 325 aaKnown RBP9.44□□□□□ -0.9
SNHG6-202ENST00000520619 ZMYND10O75800 440 aa9.43□□□□□ -0.9
SNHG6-202ENST00000520619 RBM46Q8TBY0 533 aaKnown RBP9.43□□□□□ -0.9
SNHG6-202ENST00000520619 WNT2BQ93097 391 aa9.43□□□□□ -0.9
SNHG6-202ENST00000520619 MAP2K5Q13163 448 aa9.42□□□□□ -0.9
SNHG6-202ENST00000520619 OATP04181 439 aa9.41□□□□□ -0.9
SNHG6-202ENST00000520619 ANKK1Q8NFD2 765 aa9.41□□□□□ -0.9
SNHG6-202ENST00000520619 BARGINQ6ZT62 677 aa9.4□□□□□ -0.9
SNHG6-202ENST00000520619 PXYLP1Q8TE99 480 aa9.4□□□□□ -0.9
SNHG6-202ENST00000520619 MINK1Q8N4C8 1332 aaPredicted RBP9.39□□□□□ -0.91
SNHG6-202ENST00000520619 IRF6O14896 467 aa9.39□□□□□ -0.91
SNHG6-202ENST00000520619 THSD4Q6ZMP0 1018 aa9.39□□□□□ -0.91
SNHG6-202ENST00000520619 METTL3Q86U44 580 aaKnown RBP9.39□□□□□ -0.91
SNHG6-202ENST00000520619 RCCD1A6NED2 376 aa9.38□□□□□ -0.91
SNHG6-202ENST00000520619 SOWAHBA6NEL2 793 aa9.38□□□□□ -0.91
SNHG6-202ENST00000520619 SAMD7Q7Z3H4 446 aa9.38□□□□□ -0.91
SNHG6-202ENST00000520619 LRCH3Q96II8 777 aa9.38□□□□□ -0.91
SNHG6-202ENST00000520619 DNAJB2P25686 324 aa9.37□□□□□ -0.91
SNHG6-202ENST00000520619 BCAMP50895 628 aa9.37□□□□□ -0.91
SNHG6-202ENST00000520619 KRI1Q8N9T8 703 aaKnown RBP9.36□□□□□ -0.91
SNHG6-202ENST00000520619 CCDC102AQ96A19 550 aa9.36□□□□□ -0.91
SNHG6-202ENST00000520619 PHOX2BQ99453 314 aa9.36□□□□□ -0.91
SNHG6-202ENST00000520619 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.36□□□□□ -0.91
SNHG6-202ENST00000520619 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.35□□□□□ -0.91
SNHG6-202ENST00000520619 HDGFP51858 240 aaKnown RBP9.35□□□□□ -0.91
SNHG6-202ENST00000520619 PTPN5P54829 565 aa9.35□□□□□ -0.91
SNHG6-202ENST00000520619 SWT1Q5T5J6 900 aaKnown RBP9.35□□□□□ -0.91
SNHG6-202ENST00000520619 TMEM134Q9H6X4 195 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms