RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 RABGEF1Q9UJ41 708 aa10.72□□□□□ -0.69
SQLE-204ENST00000520493 NYAP1Q6ZVC0 841 aa10.7□□□□□ -0.7
SQLE-204ENST00000520493 NRG2O14511 850 aaPredicted RBP10.68□□□□□ -0.7
SQLE-204ENST00000520493 ZNF775Q96BV0 537 aaPredicted RBP10.68□□□□□ -0.7
SQLE-204ENST00000520493 ZFRQ96KR1 1074 aaKnown RBP10.66□□□□□ -0.7
SQLE-204ENST00000520493 PRKD2Q9BZL6 878 aa10.66□□□□□ -0.7
SQLE-204ENST00000520493 PPP1R3GB7ZBB8 358 aa10.65□□□□□ -0.7
SQLE-204ENST00000520493 EVI5O60447 810 aa10.65□□□□□ -0.7
SQLE-204ENST00000520493 ANO8Q9HCE9 1232 aaPredicted RBP10.65□□□□□ -0.7
SQLE-204ENST00000520493 LAPTM4BQ86VI4 370 aa10.64□□□□□ -0.71
SQLE-204ENST00000520493 SPRYD3Q8NCJ5 442 aa10.64□□□□□ -0.71
SQLE-204ENST00000520493 COL9A1P20849 921 aa10.62□□□□□ -0.71
SQLE-204ENST00000520493 KIAA1468Q9P260 1216 aa10.62□□□□□ -0.71
SQLE-204ENST00000520493 PPP1R15BQ5SWA1 713 aa10.61□□□□□ -0.71
SQLE-204ENST00000520493 SEPT9Q9UHD8 586 aaPredicted RBP10.6□□□□□ -0.71
SQLE-204ENST00000520493 HPS5Q9UPZ3 1129 aa10.59□□□□□ -0.71
SQLE-204ENST00000520493 PDE4AP27815 886 aa10.58□□□□□ -0.72
SQLE-204ENST00000520493 PAXIP1Q6ZW49 1069 aaPredicted RBP10.57□□□□□ -0.72
SQLE-204ENST00000520493 CFAP44Q96MT7 982 aa10.57□□□□□ -0.72
SQLE-204ENST00000520493 TSR3Q9UJK0 312 aaKnown RBP10.57□□□□□ -0.72
SQLE-204ENST00000520493 CRISPLD2Q9H0B8 497 aa10.55□□□□□ -0.72
SQLE-204ENST00000520493 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.55□□□□□ -0.72
SQLE-204ENST00000520493 PDZRN3Q9UPQ7 1066 aa10.54□□□□□ -0.72
SQLE-204ENST00000520493 PCDHGA10Q9Y5H3 936 aa10.54□□□□□ -0.72
SQLE-204ENST00000520493 LRCH3Q96II8 777 aa10.53□□□□□ -0.72
SQLE-204ENST00000520493 MAP3K9P80192 1104 aa10.52□□□□□ -0.73
SQLE-204ENST00000520493 V9GY48 417 aaPredicted RBP10.52□□□□□ -0.73
SQLE-204ENST00000520493 LARP6Q9BRS8 491 aaKnown RBP10.51□□□□□ -0.73
SQLE-204ENST00000520493 NCKAP5LQ9HCH0 1330 aa10.51□□□□□ -0.73
SQLE-204ENST00000520493 PPP1R18Q6NYC8 613 aa10.5□□□□□ -0.73
SQLE-204ENST00000520493 DDX27Q96GQ7 796 aaKnown RBP10.5□□□□□ -0.73
SQLE-204ENST00000520493 FAM98CQ17RN3 349 aaKnown RBP10.49□□□□□ -0.73
SQLE-204ENST00000520493 TYW1BQ6NUM6 668 aa10.48□□□□□ -0.73
SQLE-204ENST00000520493 ONECUT3O60422 494 aaPredicted RBP10.47□□□□□ -0.73
SQLE-204ENST00000520493 TJAP1Q5JTD0 557 aa10.47□□□□□ -0.73
SQLE-204ENST00000520493 PPP4CP60510 307 aa10.46□□□□□ -0.73
SQLE-204ENST00000520493 CADPS2Q86UW7 1296 aa10.46□□□□□ -0.73
SQLE-204ENST00000520493 FBXW7Q969H0 707 aa10.46□□□□□ -0.73
SQLE-204ENST00000520493 MFSD10Q14728 455 aa10.45□□□□□ -0.74
SQLE-204ENST00000520493 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.44□□□□□ -0.74
SQLE-204ENST00000520493 TRIM6-TRIM34B2RNG4 842 aa10.43□□□□□ -0.74
SQLE-204ENST00000520493 PHF14O94880 888 aa10.42□□□□□ -0.74
SQLE-204ENST00000520493 MTRQ99707 1265 aa10.42□□□□□ -0.74
SQLE-204ENST00000520493 C6orf132Q5T0Z8 1188 aa10.41□□□□□ -0.74
SQLE-204ENST00000520493 IL21Q9HBE4 155 aa10.4□□□□□ -0.74
SQLE-204ENST00000520493 POTECB2RU33 542 aa10.38□□□□□ -0.75
SQLE-204ENST00000520493 ZNF516Q92618 1163 aa10.38□□□□□ -0.75
SQLE-204ENST00000520493 WDR70Q9NW82 654 aa10.38□□□□□ -0.75
SQLE-204ENST00000520493 RBM33Q96EV2 1170 aaKnown RBP10.36□□□□□ -0.75
SQLE-204ENST00000520493 EMILIN3Q9NT22 766 aa10.36□□□□□ -0.75
SQLE-204ENST00000520493 PKDCCQ504Y2 493 aa10.33□□□□□ -0.76
SQLE-204ENST00000520493 SAMD7Q7Z3H4 446 aa10.33□□□□□ -0.76
SQLE-204ENST00000520493 NKX2-3Q8TAU0 364 aa10.33□□□□□ -0.76
SQLE-204ENST00000520493 MYT1Q01538 1121 aa10.32□□□□□ -0.76
SQLE-204ENST00000520493 PACS2Q86VP3 889 aa10.32□□□□□ -0.76
SQLE-204ENST00000520493 PLCB2Q00722 1185 aa10.31□□□□□ -0.76
SQLE-204ENST00000520493 EPAS1Q99814 870 aa10.31□□□□□ -0.76
SQLE-204ENST00000520493 CAMK2BQ13554 666 aa10.3□□□□□ -0.76
SQLE-204ENST00000520493 TREML4Q6UXN2 200 aa10.3□□□□□ -0.76
SQLE-204ENST00000520493 SMAPO00193 183 aa10.29□□□□□ -0.76
SQLE-204ENST00000520493 GGCXP38435 758 aa10.29□□□□□ -0.76
SQLE-204ENST00000520493 TSHZ2Q9NRE2 1034 aa10.29□□□□□ -0.76
SQLE-204ENST00000520493 TSKSQ9UJT2 592 aa10.29□□□□□ -0.76
SQLE-204ENST00000520493 E2F4Q16254 413 aa10.27□□□□□ -0.77
SQLE-204ENST00000520493 TRIM67Q6ZTA4 783 aa10.27□□□□□ -0.77
SQLE-204ENST00000520493 DGAT1O75907 488 aa10.26□□□□□ -0.77
SQLE-204ENST00000520493 RNF40O75150 1001 aa10.25□□□□□ -0.77
SQLE-204ENST00000520493 DPYSL4O14531 572 aa10.24□□□□□ -0.77
SQLE-204ENST00000520493 LCE2AQ5TA79 106 aaPredicted RBP10.24□□□□□ -0.77
SQLE-204ENST00000520493 SLC19A1P41440 591 aa10.22□□□□□ -0.77
SQLE-204ENST00000520493 APLP1P51693 650 aa10.22□□□□□ -0.77
SQLE-204ENST00000520493 COPS2P61201 443 aa10.22□□□□□ -0.77
SQLE-204ENST00000520493 DDX12PQ92771 950 aa10.21□□□□□ -0.77
SQLE-204ENST00000520493 FAM187AA6NFU0 413 aa10.2□□□□□ -0.78
SQLE-204ENST00000520493 TSR1Q2NL82 804 aaKnown RBP10.2□□□□□ -0.78
SQLE-204ENST00000520493 TMUB1Q9BVT8 246 aa10.2□□□□□ -0.78
SQLE-204ENST00000520493 HAP1P54257 671 aaPredicted RBP10.19□□□□□ -0.78
SQLE-204ENST00000520493 SPDYE16A6NNV3 312 aaPredicted RBP10.18□□□□□ -0.78
SQLE-204ENST00000520493 MAP3K7O43318 606 aa10.18□□□□□ -0.78
SQLE-204ENST00000520493 ST8SIA5O15466 376 aa10.16□□□□□ -0.78
SQLE-204ENST00000520493 PDIA6Q15084 440 aa10.16□□□□□ -0.78
SQLE-204ENST00000520493 CDCA7LQ96GN5 454 aa10.16□□□□□ -0.78
SQLE-204ENST00000520493 STK17AQ9UEE5 414 aa10.16□□□□□ -0.78
SQLE-204ENST00000520493 ARIH1Q9Y4X5 557 aaPredicted RBP10.16□□□□□ -0.78
SQLE-204ENST00000520493 HDGFP51858 240 aaKnown RBP10.15□□□□□ -0.78
SQLE-204ENST00000520493 PNMA3Q9UL41 463 aa10.15□□□□□ -0.78
SQLE-204ENST00000520493 C3orf80F5H4A9 247 aa10.14□□□□□ -0.79
SQLE-204ENST00000520493 WFS1O76024 890 aa10.14□□□□□ -0.79
SQLE-204ENST00000520493 SPRYD7Q5W111 196 aa10.14□□□□□ -0.79
SQLE-204ENST00000520493 P3H3Q8IVL6 736 aa10.14□□□□□ -0.79
SQLE-204ENST00000520493 TATDN2Q93075 761 aa10.14□□□□□ -0.79
SQLE-204ENST00000520493 EMID1Q96A84 441 aaPredicted RBP10.14□□□□□ -0.79
SQLE-204ENST00000520493 FAM198AQ9UFP1 575 aa10.14□□□□□ -0.79
SQLE-204ENST00000520493 RNF223E7ERA6 249 aa10.13□□□□□ -0.79
SQLE-204ENST00000520493 TNFRSF10AO00220 468 aa10.13□□□□□ -0.79
SQLE-204ENST00000520493 PRR20EP86478 221 aa10.13□□□□□ -0.79
SQLE-204ENST00000520493 PRR20CP86479 221 aa10.13□□□□□ -0.79
SQLE-204ENST00000520493 PRR20DP86480 221 aa10.13□□□□□ -0.79
SQLE-204ENST00000520493 PRR20BP86481 221 aa10.13□□□□□ -0.79
SQLE-204ENST00000520493 PRR20AP86496 221 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms