RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 RUSC2Q8N2Y8 1516 aa15.11■□□□□ 0.01
ERGIC1-208ENST00000520399 PMFBP1Q8TBY8 1022 aa15.11■□□□□ 0.01
ERGIC1-208ENST00000520399 KIF15Q9NS87 1388 aa15.11■□□□□ 0.01
ERGIC1-208ENST00000520399 HTATSF1O43719 755 aaKnown RBP15.11■□□□□ 0.01
ERGIC1-208ENST00000520399 SPRYD3Q8NCJ5 442 aa15.11■□□□□ 0.01
ERGIC1-208ENST00000520399 PHLDB1Q86UU1 1377 aa15.1■□□□□ 0.01
ERGIC1-208ENST00000520399 ZNF771Q7L3S4 317 aaPredicted RBP15.1■□□□□ 0.01
ERGIC1-208ENST00000520399 TCERG1O14776 1098 aaKnown RBP15.1■□□□□ 0.01
ERGIC1-208ENST00000520399 PDIA4P13667 645 aaKnown RBP15.1■□□□□ 0.01
ERGIC1-208ENST00000520399 DHX57Q6P158 1386 aaKnown RBP15.1■□□□□ 0.01
ERGIC1-208ENST00000520399 JPH4Q96JJ6 628 aa15.09■□□□□ 0.01
ERGIC1-208ENST00000520399 WASHC2CQ9Y4E1 1318 aa15.09■□□□□ 0.01
ERGIC1-208ENST00000520399 CCDC144AA2RUR9 1427 aa15.08■□□□□ 0
ERGIC1-208ENST00000520399 UACAQ9BZF9 1416 aa15.08■□□□□ 0
ERGIC1-208ENST00000520399 APBB1O00213 710 aa15.08■□□□□ 0
ERGIC1-208ENST00000520399 NLRP13Q86W25 1043 aa15.07■□□□□ 0
ERGIC1-208ENST00000520399 TMX4Q9H1E5 349 aaPredicted RBP15.07■□□□□ 0
ERGIC1-208ENST00000520399 TPM2P07951 284 aa15.07■□□□□ 0
ERGIC1-208ENST00000520399 CCDC34Q96HJ3 373 aa15.07■□□□□ 0
ERGIC1-208ENST00000520399 KIAA1211Q6ZU35 1233 aa15.06■□□□□ 0
ERGIC1-208ENST00000520399 PDE3BQ13370 1112 aa15.06■□□□□ 0
ERGIC1-208ENST00000520399 FAM43AQ8N2R8 423 aa15.06■□□□□ 0
ERGIC1-208ENST00000520399 CSB-PGBD3P0DP91 1061 aa15.06■□□□□ 0
ERGIC1-208ENST00000520399 CCDC146Q8IYE0 955 aa15.06■□□□□ 0
ERGIC1-208ENST00000520399 MYBBP1AQ9BQG0 1328 aaKnown RBP15.05■□□□□ 0
ERGIC1-208ENST00000520399 SMC4Q9NTJ3 1288 aa15.05■□□□□ 0
ERGIC1-208ENST00000520399 CHMP4AQ9BY43 222 aa15.05■□□□□ -0
ERGIC1-208ENST00000520399 NUTM2DQ5VT03 806 aaPredicted RBP15.05■□□□□ -0
ERGIC1-208ENST00000520399 EID1Q9Y6B2 187 aa15.05■□□□□ -0
ERGIC1-208ENST00000520399 ZMYND15Q9H091 742 aa15.04■□□□□ -0
ERGIC1-208ENST00000520399 STK31Q9BXU1 1019 aa15.04■□□□□ -0
ERGIC1-208ENST00000520399 CENPJQ9HC77 1338 aaPredicted RBP15.03■□□□□ -0
ERGIC1-208ENST00000520399 LMOD3Q0VAK6 560 aa15.03■□□□□ -0
ERGIC1-208ENST00000520399 TAF7LQ5H9L4 462 aa15.03■□□□□ -0
ERGIC1-208ENST00000520399 GBP4Q96PP9 640 aa15.02■□□□□ -0
ERGIC1-208ENST00000520399 FGD5Q6ZNL6 1462 aa15.02□□□□□ -0.01
ERGIC1-208ENST00000520399 CUX1P39880 1505 aa15.02□□□□□ -0.01
ERGIC1-208ENST00000520399 TAF3Q5VWG9 929 aa15.01□□□□□ -0.01
ERGIC1-208ENST00000520399 IL27Q8NEV9 243 aa15.01□□□□□ -0.01
ERGIC1-208ENST00000520399 TPM3P06753 285 aa15.01□□□□□ -0.01
ERGIC1-208ENST00000520399 PTPRGP23470 1445 aa15□□□□□ -0.01
ERGIC1-208ENST00000520399 CCDC66A2RUB6 948 aa15□□□□□ -0.01
ERGIC1-208ENST00000520399 SYAP1Q96A49 352 aaPredicted RBP15□□□□□ -0.01
ERGIC1-208ENST00000520399 PDZRN4Q6ZMN7 1036 aaPredicted RBP15□□□□□ -0.01
ERGIC1-208ENST00000520399 GPATCH3Q96I76 525 aa14.99□□□□□ -0.01
ERGIC1-208ENST00000520399 HMMRO75330 724 aa14.99□□□□□ -0.01
ERGIC1-208ENST00000520399 GAPVD1Q14C86 1478 aa14.99□□□□□ -0.01
ERGIC1-208ENST00000520399 FAM13BQ9NYF5 915 aa14.99□□□□□ -0.01
ERGIC1-208ENST00000520399 TRAK1Q9UPV9 953 aa14.99□□□□□ -0.01
ERGIC1-208ENST00000520399 PANK3Q9H999 370 aa14.98□□□□□ -0.01
ERGIC1-208ENST00000520399 NGDNQ8NEJ9 315 aaKnown RBP14.98□□□□□ -0.01
ERGIC1-208ENST00000520399 ST20-MTHFSA0A0A6YYL1 179 aa14.98□□□□□ -0.01
ERGIC1-208ENST00000520399 MFAP1P55081 439 aaKnown RBP14.98□□□□□ -0.01
ERGIC1-208ENST00000520399 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.97□□□□□ -0.01
ERGIC1-208ENST00000520399 HDAC5Q9UQL6 1122 aa14.97□□□□□ -0.01
ERGIC1-208ENST00000520399 RASSF8Q8NHQ8 419 aa14.97□□□□□ -0.01
ERGIC1-208ENST00000520399 HSP90B1P14625 803 aaKnown RBP14.96□□□□□ -0.01
ERGIC1-208ENST00000520399 USP47Q96K76 1375 aa14.96□□□□□ -0.01
ERGIC1-208ENST00000520399 AMPHP49418 695 aa14.96□□□□□ -0.01
ERGIC1-208ENST00000520399 ZNF330Q9Y3S2 320 aaPredicted RBP14.96□□□□□ -0.02
ERGIC1-208ENST00000520399 FBXO3Q9UK99 471 aa14.95□□□□□ -0.02
ERGIC1-208ENST00000520399 RRP12Q5JTH9 1297 aaKnown RBP14.94□□□□□ -0.02
ERGIC1-208ENST00000520399 PRDM2Q13029 1718 aa14.94□□□□□ -0.02
ERGIC1-208ENST00000520399 CSPP1Q1MSJ5 1256 aa14.94□□□□□ -0.02
ERGIC1-208ENST00000520399 MYOM3Q5VTT5 1437 aa14.94□□□□□ -0.02
ERGIC1-208ENST00000520399 EVC2Q86UK5 1308 aa14.93□□□□□ -0.02
ERGIC1-208ENST00000520399 TRIM6-TRIM34B2RNG4 842 aa14.93□□□□□ -0.02
ERGIC1-208ENST00000520399 PATL2C9JE40 543 aaKnown RBP14.93□□□□□ -0.02
ERGIC1-208ENST00000520399 SLC4A10Q6U841 1118 aa14.93□□□□□ -0.02
ERGIC1-208ENST00000520399 CLUAP1Q96AJ1 413 aa14.93□□□□□ -0.02
ERGIC1-208ENST00000520399 SLKQ9H2G2 1235 aaPredicted RBP14.93□□□□□ -0.02
ERGIC1-208ENST00000520399 RAD54L2Q9Y4B4 1467 aa14.93□□□□□ -0.02
ERGIC1-208ENST00000520399 CGNL1Q0VF96 1302 aa14.93□□□□□ -0.02
ERGIC1-208ENST00000520399 IGF1RP08069 1367 aa14.93□□□□□ -0.02
ERGIC1-208ENST00000520399 KIF21BO75037 1637 aa14.92□□□□□ -0.02
ERGIC1-208ENST00000520399 NOM1Q5C9Z4 860 aaKnown RBP14.92□□□□□ -0.02
ERGIC1-208ENST00000520399 VGFO15240 615 aaPredicted RBP14.92□□□□□ -0.02
ERGIC1-208ENST00000520399 CHMP3Q9Y3E7 222 aa14.92□□□□□ -0.02
ERGIC1-208ENST00000520399 GORABQ5T7V8 394 aa14.91□□□□□ -0.02
ERGIC1-208ENST00000520399 FGD6Q6ZV73 1430 aa14.91□□□□□ -0.02
ERGIC1-208ENST00000520399 RRP7AQ9Y3A4 280 aaKnown RBP14.9□□□□□ -0.02
ERGIC1-208ENST00000520399 GZF1Q9H116 711 aaPredicted RBP14.9□□□□□ -0.02
ERGIC1-208ENST00000520399 CREBRFQ8IUR6 639 aa14.9□□□□□ -0.02
ERGIC1-208ENST00000520399 PRKRIP1Q9H875 184 aaPredicted RBP14.9□□□□□ -0.02
ERGIC1-208ENST00000520399 CCDC70Q6NSX1 233 aa14.89□□□□□ -0.03
ERGIC1-208ENST00000520399 E9PSI1 815 aa14.89□□□□□ -0.03
ERGIC1-208ENST00000520399 G3V3G9 751 aa14.89□□□□□ -0.03
ERGIC1-208ENST00000520399 DCAF8Q5TAQ9 597 aa14.89□□□□□ -0.03
ERGIC1-208ENST00000520399 COG3Q96JB2 828 aa14.89□□□□□ -0.03
ERGIC1-208ENST00000520399 MARCH6O60337 910 aa14.89□□□□□ -0.03
ERGIC1-208ENST00000520399 ZBED9Q6R2W3 1325 aa14.88□□□□□ -0.03
ERGIC1-208ENST00000520399 VPS53Q5VIR6 699 aa14.88□□□□□ -0.03
ERGIC1-208ENST00000520399 CENPQQ7L2Z9 268 aaPredicted RBP14.88□□□□□ -0.03
ERGIC1-208ENST00000520399 LTV1Q96GA3 475 aaPredicted RBP14.88□□□□□ -0.03
ERGIC1-208ENST00000520399 LRRC9Q6ZRR7 1453 aa14.87□□□□□ -0.03
ERGIC1-208ENST00000520399 GPS2Q13227 327 aa14.87□□□□□ -0.03
ERGIC1-208ENST00000520399 RRP1P56182 461 aaKnown RBP14.86□□□□□ -0.03
ERGIC1-208ENST00000520399 BBXQ8WY36 941 aaPredicted RBP14.86□□□□□ -0.03
ERGIC1-208ENST00000520399 NUTM2FA1L443 756 aa14.86□□□□□ -0.03
ERGIC1-208ENST00000520399 FYCO1Q9BQS8 1478 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms