RNA–Protein interactions for RNA: ENST00000520122.1

AP3B1-206, Transcript of adaptor related protein complex 3 subunit beta 1, humanhuman

TSL 3

Gene AP3B1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1-206ENST00000520122 IFFO2Q5TF58 517 aa12.85□□□□□ -0.35
AP3B1-206ENST00000520122 DPYSL4O14531 572 aa12.82□□□□□ -0.36
AP3B1-206ENST00000520122 EPAS1Q99814 870 aa12.82□□□□□ -0.36
AP3B1-206ENST00000520122 RGS20O76081 388 aa12.81□□□□□ -0.36
AP3B1-206ENST00000520122 LAPTM4BQ86VI4 370 aa12.8□□□□□ -0.36
AP3B1-206ENST00000520122 KIAA1468Q9P260 1216 aa12.8□□□□□ -0.36
AP3B1-206ENST00000520122 A0A0G2JS52 829 aa12.79□□□□□ -0.36
AP3B1-206ENST00000520122 CAMK2BQ13554 666 aa12.79□□□□□ -0.36
AP3B1-206ENST00000520122 C6orf132Q5T0Z8 1188 aa12.78□□□□□ -0.36
AP3B1-206ENST00000520122 RBM33Q96EV2 1170 aaKnown RBP12.78□□□□□ -0.36
AP3B1-206ENST00000520122 BCAMP50895 628 aa12.77□□□□□ -0.37
AP3B1-206ENST00000520122 ONECUT3O60422 494 aaPredicted RBP12.75□□□□□ -0.37
AP3B1-206ENST00000520122 DDX12PQ92771 950 aa12.75□□□□□ -0.37
AP3B1-206ENST00000520122 ZFRQ96KR1 1074 aaKnown RBP12.75□□□□□ -0.37
AP3B1-206ENST00000520122 SOWAHBA6NEL2 793 aa12.74□□□□□ -0.37
AP3B1-206ENST00000520122 BBXQ8WY36 941 aaPredicted RBP12.74□□□□□ -0.37
AP3B1-206ENST00000520122 IRX2Q9BZI1 471 aaPredicted RBP12.73□□□□□ -0.37
AP3B1-206ENST00000520122 SEPT9Q9UHD8 586 aaPredicted RBP12.73□□□□□ -0.37
AP3B1-206ENST00000520122 TRIM6-TRIM34B2RNG4 842 aa12.72□□□□□ -0.37
AP3B1-206ENST00000520122 NYAP1Q6ZVC0 841 aa12.71□□□□□ -0.37
AP3B1-206ENST00000520122 NBR1Q14596 966 aa12.69□□□□□ -0.38
AP3B1-206ENST00000520122 ITGBL1O95965 494 aaPredicted RBP12.68□□□□□ -0.38
AP3B1-206ENST00000520122 FAM98CQ17RN3 349 aaKnown RBP12.68□□□□□ -0.38
AP3B1-206ENST00000520122 WBP1LQ9NX94 342 aa12.68□□□□□ -0.38
AP3B1-206ENST00000520122 MAP3K7O43318 606 aa12.67□□□□□ -0.38
AP3B1-206ENST00000520122 LRCH3Q96II8 777 aa12.67□□□□□ -0.38
AP3B1-206ENST00000520122 PACS2Q86VP3 889 aa12.66□□□□□ -0.38
AP3B1-206ENST00000520122 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.66□□□□□ -0.38
AP3B1-206ENST00000520122 KCNC4Q03721 635 aa12.64□□□□□ -0.39
AP3B1-206ENST00000520122 EN1Q05925 392 aaPredicted RBP12.64□□□□□ -0.39
AP3B1-206ENST00000520122 SPRYD3Q8NCJ5 442 aa12.64□□□□□ -0.39
AP3B1-206ENST00000520122 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.64□□□□□ -0.39
AP3B1-206ENST00000520122 HPS5Q9UPZ3 1129 aa12.64□□□□□ -0.39
AP3B1-206ENST00000520122 SPDYE16A6NNV3 312 aaPredicted RBP12.63□□□□□ -0.39
AP3B1-206ENST00000520122 TSR3Q9UJK0 312 aaKnown RBP12.63□□□□□ -0.39
AP3B1-206ENST00000520122 PDIA6Q15084 440 aa12.62□□□□□ -0.39
AP3B1-206ENST00000520122 TSR1Q2NL82 804 aaKnown RBP12.61□□□□□ -0.39
AP3B1-206ENST00000520122 WDR70Q9NW82 654 aa12.6□□□□□ -0.39
AP3B1-206ENST00000520122 TSKSQ9UJT2 592 aa12.58□□□□□ -0.4
AP3B1-206ENST00000520122 E2F4Q16254 413 aa12.57□□□□□ -0.4
AP3B1-206ENST00000520122 PPP4CP60510 307 aa12.56□□□□□ -0.4
AP3B1-206ENST00000520122 GRXCR2A6NFK2 248 aa12.55□□□□□ -0.4
AP3B1-206ENST00000520122 CDCA7LQ96GN5 454 aa12.54□□□□□ -0.4
AP3B1-206ENST00000520122 CERKQ8TCT0 537 aa12.53□□□□□ -0.4
AP3B1-206ENST00000520122 PRSS12P56730 875 aa12.52□□□□□ -0.41
AP3B1-206ENST00000520122 CFAP44Q96MT7 982 aa12.52□□□□□ -0.41
AP3B1-206ENST00000520122 SMAPO00193 183 aa12.51□□□□□ -0.41
AP3B1-206ENST00000520122 SAMD7Q7Z3H4 446 aa12.5□□□□□ -0.41
AP3B1-206ENST00000520122 NBPF26B4DH59 902 aa12.49□□□□□ -0.41
AP3B1-206ENST00000520122 PAXIP1Q6ZW49 1069 aaPredicted RBP12.49□□□□□ -0.41
AP3B1-206ENST00000520122 HDGFP51858 240 aaKnown RBP12.48□□□□□ -0.41
AP3B1-206ENST00000520122 Q6ZNB5 142 aa12.48□□□□□ -0.41
AP3B1-206ENST00000520122 PNMA3Q9UL41 463 aa12.48□□□□□ -0.41
AP3B1-206ENST00000520122 TATDN2Q93075 761 aa12.47□□□□□ -0.41
AP3B1-206ENST00000520122 RNF40O75150 1001 aa12.46□□□□□ -0.41
AP3B1-206ENST00000520122 FAM198AQ9UFP1 575 aa12.44□□□□□ -0.42
AP3B1-206ENST00000520122 ARIH1Q9Y4X5 557 aaPredicted RBP12.44□□□□□ -0.42
AP3B1-206ENST00000520122 PRIM1P49642 420 aaKnown RBP12.43□□□□□ -0.42
AP3B1-206ENST00000520122 AMER1Q5JTC6 1135 aaPredicted RBP12.43□□□□□ -0.42
AP3B1-206ENST00000520122 NUDT18Q6ZVK8 323 aa12.41□□□□□ -0.42
AP3B1-206ENST00000520122 CDHR5Q9HBB8 845 aa12.41□□□□□ -0.42
AP3B1-206ENST00000520122 TJAP1Q5JTD0 557 aa12.4□□□□□ -0.42
AP3B1-206ENST00000520122 OSBPP22059 807 aa12.39□□□□□ -0.43
AP3B1-206ENST00000520122 MTRQ99707 1265 aa12.39□□□□□ -0.43
AP3B1-206ENST00000520122 IL21Q9HBE4 155 aa12.39□□□□□ -0.43
AP3B1-206ENST00000520122 LAPTM4AQ15012 233 aa12.38□□□□□ -0.43
AP3B1-206ENST00000520122 C3orf80F5H4A9 247 aa12.37□□□□□ -0.43
AP3B1-206ENST00000520122 RBM27Q9P2N5 1060 aaKnown RBP12.37□□□□□ -0.43
AP3B1-206ENST00000520122 NECTIN2Q92692 538 aa12.36□□□□□ -0.43
AP3B1-206ENST00000520122 GFRA3O60609 400 aa12.34□□□□□ -0.43
AP3B1-206ENST00000520122 SLC4A3P48751 1232 aa12.34□□□□□ -0.43
AP3B1-206ENST00000520122 PRKD2Q9BZL6 878 aa12.34□□□□□ -0.43
AP3B1-206ENST00000520122 PPP1R18Q6NYC8 613 aa12.32□□□□□ -0.44
AP3B1-206ENST00000520122 PADI6Q6TGC4 694 aa12.32□□□□□ -0.44
AP3B1-206ENST00000520122 APLP1P51693 650 aa12.31□□□□□ -0.44
AP3B1-206ENST00000520122 SWT1Q5T5J6 900 aaKnown RBP12.3□□□□□ -0.44
AP3B1-206ENST00000520122 SLF2Q8IX21 1173 aa12.3□□□□□ -0.44
AP3B1-206ENST00000520122 ZNF516Q92618 1163 aa12.3□□□□□ -0.44
AP3B1-206ENST00000520122 RTN4Q9NQC3 1192 aaKnown RBP12.3□□□□□ -0.44
AP3B1-206ENST00000520122 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.28□□□□□ -0.44
AP3B1-206ENST00000520122 GGCXP38435 758 aa12.26□□□□□ -0.45
AP3B1-206ENST00000520122 COPS2P61201 443 aa12.26□□□□□ -0.45
AP3B1-206ENST00000520122 V9GY48 417 aaPredicted RBP12.26□□□□□ -0.45
AP3B1-206ENST00000520122 TTC13Q8NBP0 860 aa12.25□□□□□ -0.45
AP3B1-206ENST00000520122 NPDC1Q9NQX5 325 aaPredicted RBP12.25□□□□□ -0.45
AP3B1-206ENST00000520122 TRAF7Q6Q0C0 670 aa12.24□□□□□ -0.45
AP3B1-206ENST00000520122 NKX2-3Q8TAU0 364 aa12.23□□□□□ -0.45
AP3B1-206ENST00000520122 PRR14Q9BWN1 585 aa12.22□□□□□ -0.45
AP3B1-206ENST00000520122 NRG2O14511 850 aaPredicted RBP12.21□□□□□ -0.45
AP3B1-206ENST00000520122 ARHGEF1Q92888 912 aaKnown RBP12.2□□□□□ -0.46
AP3B1-206ENST00000520122 EYA1Q99502 592 aa12.19□□□□□ -0.46
AP3B1-206ENST00000520122 PCDHB3Q9Y5E6 796 aa12.18□□□□□ -0.46
AP3B1-206ENST00000520122 ZPR1O75312 459 aa12.17□□□□□ -0.46
AP3B1-206ENST00000520122 MLLT3P42568 568 aaPredicted RBP12.17□□□□□ -0.46
AP3B1-206ENST00000520122 PDZRN3Q9UPQ7 1066 aa12.16□□□□□ -0.46
AP3B1-206ENST00000520122 RBM46Q8TBY0 533 aaKnown RBP12.15□□□□□ -0.46
AP3B1-206ENST00000520122 TMUB1Q9BVT8 246 aa12.15□□□□□ -0.46
AP3B1-206ENST00000520122 DNAJB2P25686 324 aa12.14□□□□□ -0.47
AP3B1-206ENST00000520122 NUTM2FA1L443 756 aa12.12□□□□□ -0.47
AP3B1-206ENST00000520122 LCE2BO14633 110 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms