RNA–Protein interactions for RNA: ENST00000519222.5

CSGALNACT1-207, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 2,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-207ENST00000519222 UNC13BO14795 1591 aa25.06■■□□□ 1.6
CSGALNACT1-207ENST00000519222 CARD11Q9BXL7 1154 aa25.06■■□□□ 1.6
CSGALNACT1-207ENST00000519222 CYB5RLQ6IPT4 315 aa25.05■■□□□ 1.6
CSGALNACT1-207ENST00000519222 USP47Q96K76 1375 aa25.05■■□□□ 1.6
CSGALNACT1-207ENST00000519222 KIF7Q2M1P5 1343 aa25.05■■□□□ 1.6
CSGALNACT1-207ENST00000519222 RTEL1-TNFRSF6BF6WH68 1400 aa25.04■■□□□ 1.6
CSGALNACT1-207ENST00000519222 KIF3BO15066 747 aa25.04■■□□□ 1.6
CSGALNACT1-207ENST00000519222 ZFYVE16Q7Z3T8 1539 aa25.04■■□□□ 1.6
CSGALNACT1-207ENST00000519222 CCER2I3L3R5 266 aa25.02■■□□□ 1.6
CSGALNACT1-207ENST00000519222 CD109Q6YHK3 1445 aa25.01■■□□□ 1.59
CSGALNACT1-207ENST00000519222 UHRF1BP1Q6BDS2 1440 aa25■■□□□ 1.59
CSGALNACT1-207ENST00000519222 IQGAP3Q86VI3 1631 aa24.99■■□□□ 1.59
CSGALNACT1-207ENST00000519222 CNGB1Q14028 1251 aaPredicted RBP24.97■■□□□ 1.59
CSGALNACT1-207ENST00000519222 MAGI2Q86UL8 1455 aa24.97■■□□□ 1.59
CSGALNACT1-207ENST00000519222 ATP7AQ04656 1500 aa24.97■■□□□ 1.59
CSGALNACT1-207ENST00000519222 NBPF1Q3BBV0 1214 aa24.95■■□□□ 1.59
CSGALNACT1-207ENST00000519222 CNTLNQ9NXG0 1405 aa24.95■■□□□ 1.58
CSGALNACT1-207ENST00000519222 ST20-MTHFSA0A0A6YYL1 179 aa24.95■■□□□ 1.58
CSGALNACT1-207ENST00000519222 ROCK2O75116 1388 aaKnown RBP24.94■■□□□ 1.58
CSGALNACT1-207ENST00000519222 RALGAPBQ86X10 1494 aa24.93■■□□□ 1.58
CSGALNACT1-207ENST00000519222 DHX29Q7Z478 1369 aaKnown RBP24.91■■□□□ 1.58
CSGALNACT1-207ENST00000519222 RAPGEF3O95398 923 aa24.9■■□□□ 1.58
CSGALNACT1-207ENST00000519222 A2MP01023 1474 aa24.89■■□□□ 1.58
CSGALNACT1-207ENST00000519222 INO80Q9ULG1 1556 aaPredicted RBP24.89■■□□□ 1.57
CSGALNACT1-207ENST00000519222 CCDC184Q52MB2 194 aa24.88■■□□□ 1.57
CSGALNACT1-207ENST00000519222 PRAG1Q86YV5 1406 aa24.88■■□□□ 1.57
CSGALNACT1-207ENST00000519222 KDM5CP41229 1560 aa24.87■■□□□ 1.57
CSGALNACT1-207ENST00000519222 PRKRIP1Q9H875 184 aaPredicted RBP24.87■■□□□ 1.57
CSGALNACT1-207ENST00000519222 KANK1Q14678 1352 aa24.87■■□□□ 1.57
CSGALNACT1-207ENST00000519222 ZNF518AQ6AHZ1 1483 aa24.86■■□□□ 1.57
CSGALNACT1-207ENST00000519222 ATP10AO60312 1499 aa24.85■■□□□ 1.57
CSGALNACT1-207ENST00000519222 BCORL1Q5H9F3 1711 aa24.85■■□□□ 1.57
CSGALNACT1-207ENST00000519222 GGT6Q6P531 493 aa24.83■■□□□ 1.57
CSGALNACT1-207ENST00000519222 E9PCH4 1651 aa24.8■■□□□ 1.56
CSGALNACT1-207ENST00000519222 POGZQ7Z3K3 1410 aa24.8■■□□□ 1.56
CSGALNACT1-207ENST00000519222 KIDINS220Q9ULH0 1771 aa24.79■■□□□ 1.56
CSGALNACT1-207ENST00000519222 DEPDC5O75140 1603 aa24.76■■□□□ 1.55
CSGALNACT1-207ENST00000519222 PTPRTO14522 1441 aa24.75■■□□□ 1.55
CSGALNACT1-207ENST00000519222 MRS2Q9HD23 443 aa24.74■■□□□ 1.55
CSGALNACT1-207ENST00000519222 HNRNPUQ00839 825 aaKnown RBP eCLIP24.73■■□□□ 1.55
CSGALNACT1-207ENST00000519222 FAM69CQ0P6D2 419 aa24.73■■□□□ 1.55
CSGALNACT1-207ENST00000519222 FAM9BQ8IZU0 186 aa24.73■■□□□ 1.55
CSGALNACT1-207ENST00000519222 ARID4BQ4LE39 1312 aaPredicted RBP24.72■■□□□ 1.55
CSGALNACT1-207ENST00000519222 TRPM1Q7Z4N2 1603 aa24.72■■□□□ 1.55
CSGALNACT1-207ENST00000519222 MROH1Q8NDA8 1641 aa24.72■■□□□ 1.55
CSGALNACT1-207ENST00000519222 TRPM2O94759 1503 aa24.71■■□□□ 1.55
CSGALNACT1-207ENST00000519222 VWDEQ8N2E2 1590 aa24.71■■□□□ 1.55
CSGALNACT1-207ENST00000519222 MLH3Q9UHC1 1453 aa24.7■■□□□ 1.54
CSGALNACT1-207ENST00000519222 PRDM15P57071 1507 aaPredicted RBP24.69■■□□□ 1.54
CSGALNACT1-207ENST00000519222 UGGT1Q9NYU2 1555 aa24.69■■□□□ 1.54
CSGALNACT1-207ENST00000519222 GPRASP1Q5JY77 1395 aa24.69■■□□□ 1.54
CSGALNACT1-207ENST00000519222 TET3O43151 1660 aa24.68■■□□□ 1.54
CSGALNACT1-207ENST00000519222 RIMBP3CA6NJZ7 1639 aa24.68■■□□□ 1.54
CSGALNACT1-207ENST00000519222 RIMBP3BA6NNM3 1639 aa24.68■■□□□ 1.54
CSGALNACT1-207ENST00000519222 RIMBP3Q9UFD9 1639 aa24.68■■□□□ 1.54
CSGALNACT1-207ENST00000519222 CLTCL1P53675 1640 aa24.67■■□□□ 1.54
CSGALNACT1-207ENST00000519222 CHGAP10645 457 aaKnown RBP24.67■■□□□ 1.54
CSGALNACT1-207ENST00000519222 WASHC2CQ9Y4E1 1318 aa24.67■■□□□ 1.54
CSGALNACT1-207ENST00000519222 NEO1Q92859 1461 aa24.67■■□□□ 1.54
CSGALNACT1-207ENST00000519222 CFAP74Q9C0B2 1584 aa24.67■■□□□ 1.54
CSGALNACT1-207ENST00000519222 POLR1AO95602 1720 aaPredicted RBP24.66■■□□□ 1.54
CSGALNACT1-207ENST00000519222 TESK2Q96S53 571 aa24.66■■□□□ 1.54
CSGALNACT1-207ENST00000519222 EIF2AK4Q9P2K8 1649 aaKnown RBP24.66■■□□□ 1.54
CSGALNACT1-207ENST00000519222 FRMPD1Q5SYB0 1578 aa24.65■■□□□ 1.54
CSGALNACT1-207ENST00000519222 SPHKAPQ2M3C7 1700 aa24.65■■□□□ 1.54
CSGALNACT1-207ENST00000519222 HECW2Q9P2P5 1572 aa24.64■■□□□ 1.53
CSGALNACT1-207ENST00000519222 SUPT16HQ9Y5B9 1047 aaKnown RBP24.62■■□□□ 1.53
CSGALNACT1-207ENST00000519222 DISP3Q9P2K9 1392 aa24.62■■□□□ 1.53
CSGALNACT1-207ENST00000519222 YEATS2Q9ULM3 1422 aa24.6■■□□□ 1.53
CSGALNACT1-207ENST00000519222 EFCAB6Q5THR3 1501 aa24.6■■□□□ 1.53
CSGALNACT1-207ENST00000519222 ABCA6Q8N139 1617 aa24.59■■□□□ 1.53
CSGALNACT1-207ENST00000519222 ADGRF5Q8IZF2 1346 aa24.59■■□□□ 1.53
CSGALNACT1-207ENST00000519222 PPRC1Q5VV67 1664 aaKnown RBP24.58■■□□□ 1.53
CSGALNACT1-207ENST00000519222 NPATQ14207 1427 aa24.58■■□□□ 1.53
CSGALNACT1-207ENST00000519222 CFAP70Q5T0N1 1121 aa24.58■■□□□ 1.53
CSGALNACT1-207ENST00000519222 CEP152O94986 1710 aa24.55■■□□□ 1.52
CSGALNACT1-207ENST00000519222 TMF1P82094 1093 aa24.55■■□□□ 1.52
CSGALNACT1-207ENST00000519222 MAP3K4Q9Y6R4 1608 aa24.54■■□□□ 1.52
CSGALNACT1-207ENST00000519222 SENP3-EIF4A1A0A087X0R7 540 aa24.54■■□□□ 1.52
CSGALNACT1-207ENST00000519222 MADDQ8WXG6 1647 aa24.54■■□□□ 1.52
CSGALNACT1-207ENST00000519222 LMTK2Q8IWU2 1503 aa24.52■■□□□ 1.52
CSGALNACT1-207ENST00000519222 STAC3Q96MF2 364 aa24.52■■□□□ 1.52
CSGALNACT1-207ENST00000519222 RNF17Q9BXT8 1623 aaKnown RBP24.52■■□□□ 1.52
CSGALNACT1-207ENST00000519222 NUTM2DQ5VT03 806 aaPredicted RBP24.51■■□□□ 1.51
CSGALNACT1-207ENST00000519222 PANK3Q9H999 370 aa24.51■■□□□ 1.51
CSGALNACT1-207ENST00000519222 CFAP65Q6ZU64 1925 aaKnown RBP24.5■■□□□ 1.51
CSGALNACT1-207ENST00000519222 DIP2CQ9Y2E4 1556 aa24.5■■□□□ 1.51
CSGALNACT1-207ENST00000519222 FKBP8Q14318 412 aa24.5■■□□□ 1.51
CSGALNACT1-207ENST00000519222 COL17A1Q9UMD9 1497 aaPredicted RBP24.49■■□□□ 1.51
CSGALNACT1-207ENST00000519222 SENP3Q9H4L4 574 aaPredicted RBP24.49■■□□□ 1.51
CSGALNACT1-207ENST00000519222 PER1O15534 1290 aaPredicted RBP24.49■■□□□ 1.51
CSGALNACT1-207ENST00000519222 TMC1Q8TDI8 760 aa24.49■■□□□ 1.51
CSGALNACT1-207ENST00000519222 BCANQ96GW7 911 aa24.48■■□□□ 1.51
CSGALNACT1-207ENST00000519222 ABCC3O15438 1527 aa24.48■■□□□ 1.51
CSGALNACT1-207ENST00000519222 CC2D1BQ5T0F9 858 aaKnown RBP24.47■■□□□ 1.51
CSGALNACT1-207ENST00000519222 LAMC1P11047 1609 aa24.47■■□□□ 1.51
CSGALNACT1-207ENST00000519222 GLI2P10070 1586 aa24.47■■□□□ 1.51
CSGALNACT1-207ENST00000519222 RICTORQ6R327 1708 aa24.46■■□□□ 1.51
CSGALNACT1-207ENST00000519222 NOS1P29475 1434 aa24.45■■□□□ 1.51
CSGALNACT1-207ENST00000519222 DIP2BQ9P265 1576 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms