RNA–Protein interactions for RNA: ENST00000519219.1

TRIM35-202, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 423 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-202ENST00000519219 NEURL4Q96JN8 1562 aa14.09□□□□□ -0.15
TRIM35-202ENST00000519219 FBXO31Q5XUX0 539 aaPredicted RBP14.09□□□□□ -0.15
TRIM35-202ENST00000519219 KDM5DQ9BY66 1539 aa14.07□□□□□ -0.16
TRIM35-202ENST00000519219 KIF3BO15066 747 aa14.07□□□□□ -0.16
TRIM35-202ENST00000519219 PKD2Q13563 968 aa14.07□□□□□ -0.16
TRIM35-202ENST00000519219 TNRQ92752 1358 aa14.06□□□□□ -0.16
TRIM35-202ENST00000519219 PZPP20742 1482 aa14.06□□□□□ -0.16
TRIM35-202ENST00000519219 PPP6R1Q9UPN7 881 aa14.05□□□□□ -0.16
TRIM35-202ENST00000519219 ARHGEF5Q12774 1597 aa14.05□□□□□ -0.16
TRIM35-202ENST00000519219 UBAP1LF5GYI3 381 aa14.04□□□□□ -0.16
TRIM35-202ENST00000519219 CFAP65Q6ZU64 1925 aaKnown RBP14.03□□□□□ -0.16
TRIM35-202ENST00000519219 RNF17Q9BXT8 1623 aaKnown RBP14.01□□□□□ -0.17
TRIM35-202ENST00000519219 FAM135AQ9P2D6 1515 aa14.01□□□□□ -0.17
TRIM35-202ENST00000519219 CEP152O94986 1710 aa14.01□□□□□ -0.17
TRIM35-202ENST00000519219 MROH1Q8NDA8 1641 aa14.01□□□□□ -0.17
TRIM35-202ENST00000519219 VWDEQ8N2E2 1590 aa14□□□□□ -0.17
TRIM35-202ENST00000519219 LRRC9Q6ZRR7 1453 aa14□□□□□ -0.17
TRIM35-202ENST00000519219 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14□□□□□ -0.17
TRIM35-202ENST00000519219 LOC105371045A0A1W2PR82 267 aa14□□□□□ -0.17
TRIM35-202ENST00000519219 STRCP1A6NGW2 1772 aa14□□□□□ -0.17
TRIM35-202ENST00000519219 MAST1Q9Y2H9 1570 aa14□□□□□ -0.17
TRIM35-202ENST00000519219 WASHC2CQ9Y4E1 1318 aa13.99□□□□□ -0.17
TRIM35-202ENST00000519219 ABCC3O15438 1527 aa13.99□□□□□ -0.17
TRIM35-202ENST00000519219 VPS8Q8N3P4 1428 aa13.98□□□□□ -0.17
TRIM35-202ENST00000519219 MIA2Q96PC5 1412 aa13.98□□□□□ -0.17
TRIM35-202ENST00000519219 ALKQ9UM73 1620 aa13.98□□□□□ -0.17
TRIM35-202ENST00000519219 UGGT1Q9NYU2 1555 aa13.98□□□□□ -0.17
TRIM35-202ENST00000519219 KANK4Q5T7N3 995 aaPredicted RBP13.98□□□□□ -0.17
TRIM35-202ENST00000519219 SHANK2Q9UPX8 1470 aa13.98□□□□□ -0.17
TRIM35-202ENST00000519219 DEPDC5O75140 1603 aa13.97□□□□□ -0.17
TRIM35-202ENST00000519219 IQGAP1P46940 1657 aa13.96□□□□□ -0.17
TRIM35-202ENST00000519219 ZC3H13Q5T200 1668 aaKnown RBP13.96□□□□□ -0.17
TRIM35-202ENST00000519219 NLRP1Q9C000 1473 aa13.96□□□□□ -0.17
TRIM35-202ENST00000519219 EIF2AK4Q9P2K8 1649 aaKnown RBP13.96□□□□□ -0.17
TRIM35-202ENST00000519219 CPS1P31327 1500 aa13.95□□□□□ -0.18
TRIM35-202ENST00000519219 RSPH4AQ5TD94 716 aa13.95□□□□□ -0.18
TRIM35-202ENST00000519219 NPHP4O75161 1426 aaPredicted RBP13.95□□□□□ -0.18
TRIM35-202ENST00000519219 ERVK-7P63135 1459 aa13.94□□□□□ -0.18
TRIM35-202ENST00000519219 TSPY4P0CV99 314 aa13.94□□□□□ -0.18
TRIM35-202ENST00000519219 TSPY10P0CW01 314 aa13.94□□□□□ -0.18
TRIM35-202ENST00000519219 HSPA1LP34931 641 aa13.94□□□□□ -0.18
TRIM35-202ENST00000519219 PIP4K2BP78356 416 aa13.94□□□□□ -0.18
TRIM35-202ENST00000519219 MED14O60244 1454 aa13.93□□□□□ -0.18
TRIM35-202ENST00000519219 SCAF1Q9H7N4 1312 aaKnown RBP13.93□□□□□ -0.18
TRIM35-202ENST00000519219 UBR1Q8IWV7 1749 aa13.93□□□□□ -0.18
TRIM35-202ENST00000519219 ANKLE2Q86XL3 938 aa13.93□□□□□ -0.18
TRIM35-202ENST00000519219 CROCC2H7BZ55 1655 aa13.93□□□□□ -0.18
TRIM35-202ENST00000519219 MED1Q15648 1581 aaPredicted RBP13.92□□□□□ -0.18
TRIM35-202ENST00000519219 MYOM3Q5VTT5 1437 aa13.92□□□□□ -0.18
TRIM35-202ENST00000519219 THEMISQ8N1K5 641 aaPredicted RBP13.91□□□□□ -0.18
TRIM35-202ENST00000519219 MAP3K1Q13233 1512 aa13.9□□□□□ -0.18
TRIM35-202ENST00000519219 DUOX2Q9NRD8 1548 aa13.89□□□□□ -0.19
TRIM35-202ENST00000519219 XIRP1Q702N8 1843 aaKnown RBP13.88□□□□□ -0.19
TRIM35-202ENST00000519219 PTPN23Q9H3S7 1636 aa13.88□□□□□ -0.19
TRIM35-202ENST00000519219 PRDM15P57071 1507 aaPredicted RBP13.88□□□□□ -0.19
TRIM35-202ENST00000519219 LRRC7Q96NW7 1537 aa13.88□□□□□ -0.19
TRIM35-202ENST00000519219 SENP3Q9H4L4 574 aaPredicted RBP13.87□□□□□ -0.19
TRIM35-202ENST00000519219 ABCC5O15440 1437 aa13.87□□□□□ -0.19
TRIM35-202ENST00000519219 TOM1O60784 492 aa13.86□□□□□ -0.19
TRIM35-202ENST00000519219 PIK3C2BO00750 1634 aa13.86□□□□□ -0.19
TRIM35-202ENST00000519219 KIF15Q9NS87 1388 aa13.85□□□□□ -0.19
TRIM35-202ENST00000519219 SYNMO15061 1565 aa13.85□□□□□ -0.19
TRIM35-202ENST00000519219 LTKP29376 864 aa13.84□□□□□ -0.19
TRIM35-202ENST00000519219 RRP7BPQ9NSQ0 103 aa13.84□□□□□ -0.19
TRIM35-202ENST00000519219 SCAF11Q99590 1463 aaKnown RBP13.84□□□□□ -0.19
TRIM35-202ENST00000519219 ARHGAP23Q9P227 1491 aa13.84□□□□□ -0.19
TRIM35-202ENST00000519219 SLIT1O75093 1534 aa13.83□□□□□ -0.2
TRIM35-202ENST00000519219 DAPK1P53355 1430 aa13.82□□□□□ -0.2
TRIM35-202ENST00000519219 ARHGAP31Q2M1Z3 1444 aa13.81□□□□□ -0.2
TRIM35-202ENST00000519219 ERBINQ96RT1 1412 aa13.81□□□□□ -0.2
TRIM35-202ENST00000519219 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.81□□□□□ -0.2
TRIM35-202ENST00000519219 FGD6Q6ZV73 1430 aa13.8□□□□□ -0.2
TRIM35-202ENST00000519219 TXNDC2Q86VQ3 553 aa13.79□□□□□ -0.2
TRIM35-202ENST00000519219 CHIC2Q9UKJ5 165 aa13.78□□□□□ -0.2
TRIM35-202ENST00000519219 MYO5BQ9ULV0 1848 aa13.78□□□□□ -0.2
TRIM35-202ENST00000519219 LMTK2Q8IWU2 1503 aa13.76□□□□□ -0.21
TRIM35-202ENST00000519219 TMEM2Q9UHN6 1383 aa13.76□□□□□ -0.21
TRIM35-202ENST00000519219 EFCAB6Q5THR3 1501 aa13.75□□□□□ -0.21
TRIM35-202ENST00000519219 KDM5AP29375 1690 aaKnown RBP13.75□□□□□ -0.21
TRIM35-202ENST00000519219 TET3O43151 1660 aa13.74□□□□□ -0.21
TRIM35-202ENST00000519219 IDI1Q13907 227 aa13.73□□□□□ -0.21
TRIM35-202ENST00000519219 RBM33Q96EV2 1170 aaKnown RBP13.73□□□□□ -0.21
TRIM35-202ENST00000519219 ADGRB3O60242 1522 aa13.73□□□□□ -0.21
TRIM35-202ENST00000519219 NOS1P29475 1434 aa13.73□□□□□ -0.21
TRIM35-202ENST00000519219 KANK1Q14678 1352 aa13.72□□□□□ -0.21
TRIM35-202ENST00000519219 ANKRD30AQ9BXX3 1397 aa13.72□□□□□ -0.21
TRIM35-202ENST00000519219 PHF23Q9BUL5 403 aaPredicted RBP13.72□□□□□ -0.21
TRIM35-202ENST00000519219 EID1Q9Y6B2 187 aa13.71□□□□□ -0.21
TRIM35-202ENST00000519219 ADGRL2O95490 1459 aa13.71□□□□□ -0.21
TRIM35-202ENST00000519219 TMEM94Q12767 1356 aa13.71□□□□□ -0.22
TRIM35-202ENST00000519219 GCC2Q8IWJ2 1684 aa13.7□□□□□ -0.22
TRIM35-202ENST00000519219 SLC26A8Q96RN1 970 aa13.7□□□□□ -0.22
TRIM35-202ENST00000519219 STAG3Q9UJ98 1225 aa13.7□□□□□ -0.22
TRIM35-202ENST00000519219 ROBO1Q9Y6N7 1651 aa13.69□□□□□ -0.22
TRIM35-202ENST00000519219 APLP2Q06481 763 aa13.69□□□□□ -0.22
TRIM35-202ENST00000519219 RGS17Q9UGC6 210 aaPredicted RBP13.69□□□□□ -0.22
TRIM35-202ENST00000519219 NWD1Q149M9 1564 aa13.69□□□□□ -0.22
TRIM35-202ENST00000519219 CHD2O14647 1828 aaKnown RBP13.67□□□□□ -0.22
TRIM35-202ENST00000519219 TMEM131LA2VDJ0 1609 aa13.66□□□□□ -0.22
TRIM35-202ENST00000519219 KCNA6P17658 529 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms