RNA–Protein interactions for RNA: ENST00000518960.5

MSR1-209, Transcript of macrophage scavenger receptor 1, humanhuman

TSL 3

Gene MSR1, Length 353 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1-209ENST00000518960 SMYD5Q6GMV2 418 aa5.01□□□□□ -1.61
MSR1-209ENST00000518960 ANKRD13DQ6ZTN6 518 aa5.01□□□□□ -1.61
MSR1-209ENST00000518960 BCL2L12Q9HB09 334 aa5□□□□□ -1.61
MSR1-209ENST00000518960 PCDHGA10Q9Y5H3 936 aa5□□□□□ -1.61
MSR1-209ENST00000518960 GRXCR2A6NFK2 248 aa4.99□□□□□ -1.61
MSR1-209ENST00000518960 LSM11P83369 360 aaKnown RBP eCLIP4.99□□□□□ -1.61
MSR1-209ENST00000518960 DDX12PQ92771 950 aa4.99□□□□□ -1.61
MSR1-209ENST00000518960 KDM2AQ9Y2K7 1162 aa4.99□□□□□ -1.61
MSR1-209ENST00000518960 CECR2Q9BXF3 1484 aa4.99□□□□□ -1.61
MSR1-209ENST00000518960 TK2O00142 265 aa4.98□□□□□ -1.61
MSR1-209ENST00000518960 KCNV2Q8TDN2 545 aa4.98□□□□□ -1.61
MSR1-209ENST00000518960 AXIN2Q9Y2T1 843 aa4.98□□□□□ -1.61
MSR1-209ENST00000518960 TULP1O00294 542 aaPredicted RBP4.97□□□□□ -1.61
MSR1-209ENST00000518960 C6orf132Q5T0Z8 1188 aa4.97□□□□□ -1.61
MSR1-209ENST00000518960 KCNK17Q96T54 332 aa4.97□□□□□ -1.61
MSR1-209ENST00000518960 ADAM33Q9BZ11 813 aa4.97□□□□□ -1.61
MSR1-209ENST00000518960 MAP3K7O43318 606 aa4.96□□□□□ -1.62
MSR1-209ENST00000518960 PSEN2P49810 448 aa4.96□□□□□ -1.62
MSR1-209ENST00000518960 NBR1Q14596 966 aa4.96□□□□□ -1.62
MSR1-209ENST00000518960 CERKQ8TCT0 537 aa4.96□□□□□ -1.62
MSR1-209ENST00000518960 RBM33Q96EV2 1170 aaKnown RBP4.96□□□□□ -1.62
MSR1-209ENST00000518960 SLC4A5Q9BY07 1137 aa4.96□□□□□ -1.62
MSR1-209ENST00000518960 EIF4G1Q04637 1599 aaKnown RBP4.95□□□□□ -1.62
MSR1-209ENST00000518960 SMARCA4P51532 1647 aa4.95□□□□□ -1.62
MSR1-209ENST00000518960 ONECUT3O60422 494 aaPredicted RBP4.95□□□□□ -1.62
MSR1-209ENST00000518960 GOLGA8CPA6NN73 597 aa4.94□□□□□ -1.62
MSR1-209ENST00000518960 PPP1R3GB7ZBB8 358 aa4.94□□□□□ -1.62
MSR1-209ENST00000518960 OSBPP22059 807 aa4.94□□□□□ -1.62
MSR1-209ENST00000518960 EN1Q05925 392 aaPredicted RBP4.94□□□□□ -1.62
MSR1-209ENST00000518960 ADGRD1Q6QNK2 874 aa4.94□□□□□ -1.62
MSR1-209ENST00000518960 POTEEQ6S8J3 1075 aa4.94□□□□□ -1.62
MSR1-209ENST00000518960 MROH2BQ7Z745 1585 aa4.94□□□□□ -1.62
MSR1-209ENST00000518960 BAZ1AQ9NRL2 1556 aaPredicted RBP4.94□□□□□ -1.62
MSR1-209ENST00000518960 PACS2Q86VP3 889 aa4.93□□□□□ -1.62
MSR1-209ENST00000518960 VPS9D1Q9Y2B5 631 aa4.93□□□□□ -1.62
MSR1-209ENST00000518960 CC2D2AQ9P2K1 1620 aa4.93□□□□□ -1.62
MSR1-209ENST00000518960 SEMA3EO15041 775 aa4.92□□□□□ -1.62
MSR1-209ENST00000518960 DMRTA1Q5VZB9 504 aa4.92□□□□□ -1.62
MSR1-209ENST00000518960 RNF166Q96A37 237 aaPredicted RBP4.92□□□□□ -1.62
MSR1-209ENST00000518960 ZBED2Q9BTP6 218 aa4.92□□□□□ -1.62
MSR1-209ENST00000518960 NBPF3Q9H094 633 aa4.92□□□□□ -1.62
MSR1-209ENST00000518960 MYT1LQ9UL68 1186 aa4.92□□□□□ -1.62
MSR1-209ENST00000518960 SUPT5HO00267 1087 aaKnown RBP4.91□□□□□ -1.62
MSR1-209ENST00000518960 MLLT3P42568 568 aaPredicted RBP4.91□□□□□ -1.62
MSR1-209ENST00000518960 HDGFP51858 240 aaKnown RBP4.91□□□□□ -1.62
MSR1-209ENST00000518960 MRPL50Q8N5N7 158 aaKnown RBP4.91□□□□□ -1.62
MSR1-209ENST00000518960 RABGEF1Q9UJ41 708 aa4.91□□□□□ -1.62
MSR1-209ENST00000518960 WIZO95785 1651 aa4.91□□□□□ -1.62
MSR1-209ENST00000518960 RSF1Q96T23 1441 aaPredicted RBP4.9□□□□□ -1.62
MSR1-209ENST00000518960 NUTM2FA1L443 756 aa4.9□□□□□ -1.63
MSR1-209ENST00000518960 TESPA1A2RU30 521 aaPredicted RBP4.9□□□□□ -1.63
MSR1-209ENST00000518960 PRSS12P56730 875 aa4.9□□□□□ -1.63
MSR1-209ENST00000518960 KIAA1468Q9P260 1216 aa4.9□□□□□ -1.63
MSR1-209ENST00000518960 TRIM6-TRIM34B2RNG4 842 aa4.89□□□□□ -1.63
MSR1-209ENST00000518960 HRO43593 1189 aa4.89□□□□□ -1.63
MSR1-209ENST00000518960 SLC24A1O60721 1099 aa4.89□□□□□ -1.63
MSR1-209ENST00000518960 COL9A1P20849 921 aa4.89□□□□□ -1.63
MSR1-209ENST00000518960 TSR1Q2NL82 804 aaKnown RBP4.89□□□□□ -1.63
MSR1-209ENST00000518960 LAPTM4BQ86VI4 370 aa4.89□□□□□ -1.63
MSR1-209ENST00000518960 CDCA7LQ96GN5 454 aa4.89□□□□□ -1.63
MSR1-209ENST00000518960 ATAD2BQ9ULI0 1458 aa4.88□□□□□ -1.63
MSR1-209ENST00000518960 SMARCA2P51531 1590 aa4.88□□□□□ -1.63
MSR1-209ENST00000518960 BHMG1C9JSJ3 638 aaPredicted RBP4.88□□□□□ -1.63
MSR1-209ENST00000518960 FCHSD2O94868 740 aa4.88□□□□□ -1.63
MSR1-209ENST00000518960 PROX2Q3B8N5 592 aa4.87□□□□□ -1.63
MSR1-209ENST00000518960 RBM27Q9P2N5 1060 aaKnown RBP4.87□□□□□ -1.63
MSR1-209ENST00000518960 BAZ1BQ9UIG0 1483 aaKnown RBP4.87□□□□□ -1.63
MSR1-209ENST00000518960 HCSTQ9UBK5 93 aa4.86□□□□□ -1.63
MSR1-209ENST00000518960 NBPF26B4DH59 902 aa4.85□□□□□ -1.63
MSR1-209ENST00000518960 SLC4A3P48751 1232 aa4.85□□□□□ -1.63
MSR1-209ENST00000518960 TATDN2Q93075 761 aa4.85□□□□□ -1.63
MSR1-209ENST00000518960 WNT2BQ93097 391 aa4.85□□□□□ -1.63
MSR1-209ENST00000518960 KCTD12Q96CX2 325 aaKnown RBP4.85□□□□□ -1.63
MSR1-209ENST00000518960 NPDC1Q9NQX5 325 aaPredicted RBP4.85□□□□□ -1.63
MSR1-209ENST00000518960 PEG3Q9GZU2 1588 aa4.85□□□□□ -1.63
MSR1-209ENST00000518960 TOP2AP11388 1531 aaKnown RBP4.84□□□□□ -1.63
MSR1-209ENST00000518960 HMGXB3Q12766 1538 aa4.84□□□□□ -1.63
MSR1-209ENST00000518960 OATP04181 439 aa4.84□□□□□ -1.63
MSR1-209ENST00000518960 PRIM1P49642 420 aaKnown RBP4.84□□□□□ -1.63
MSR1-209ENST00000518960 PTGDRQ13258 359 aa4.84□□□□□ -1.63
MSR1-209ENST00000518960 HIC1Q14526 733 aa4.84□□□□□ -1.63
MSR1-209ENST00000518960 FAM98CQ17RN3 349 aaKnown RBP4.84□□□□□ -1.63
MSR1-209ENST00000518960 RBM26Q5T8P6 1007 aaKnown RBP4.84□□□□□ -1.63
MSR1-209ENST00000518960 ANKK1Q8NFD2 765 aa4.84□□□□□ -1.63
MSR1-209ENST00000518960 PNMA3Q9UL41 463 aa4.84□□□□□ -1.63
MSR1-209ENST00000518960 NCAPD3P42695 1498 aa4.83□□□□□ -1.64
MSR1-209ENST00000518960 NUDT18Q6ZVK8 323 aa4.83□□□□□ -1.64
MSR1-209ENST00000518960 RBM46Q8TBY0 533 aaKnown RBP4.83□□□□□ -1.64
MSR1-209ENST00000518960 ZFRQ96KR1 1074 aaKnown RBP4.83□□□□□ -1.64
MSR1-209ENST00000518960 TSKSQ9UJT2 592 aa4.83□□□□□ -1.64
MSR1-209ENST00000518960 GNPATO15228 680 aa4.82□□□□□ -1.64
MSR1-209ENST00000518960 PADI6Q6TGC4 694 aa4.82□□□□□ -1.64
MSR1-209ENST00000518960 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.82□□□□□ -1.64
MSR1-209ENST00000518960 GPIHBP1Q8IV16 184 aa4.82□□□□□ -1.64
MSR1-209ENST00000518960 NECTIN2Q92692 538 aa4.82□□□□□ -1.64
MSR1-209ENST00000518960 CDHR5Q9HBB8 845 aa4.82□□□□□ -1.64
MSR1-209ENST00000518960 SEPT9Q9UHD8 586 aaPredicted RBP4.82□□□□□ -1.64
MSR1-209ENST00000518960 PTPN5P54829 565 aa4.81□□□□□ -1.64
MSR1-209ENST00000518960 NYAP1Q6ZVC0 841 aa4.81□□□□□ -1.64
MSR1-209ENST00000518960 TTC13Q8NBP0 860 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms