RNA–Protein interactions for RNA: ENST00000518877.1

PCM1-208, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-208ENST00000518877 IFFO2Q5TF58 517 aa8.98□□□□□ -0.97
PCM1-208ENST00000518877 A0A0G2JS52 829 aa8.95□□□□□ -0.98
PCM1-208ENST00000518877 RGS20O76081 388 aa8.95□□□□□ -0.98
PCM1-208ENST00000518877 DPYSL4O14531 572 aa8.94□□□□□ -0.98
PCM1-208ENST00000518877 BCAMP50895 628 aa8.94□□□□□ -0.98
PCM1-208ENST00000518877 EPAS1Q99814 870 aa8.93□□□□□ -0.98
PCM1-208ENST00000518877 KIAA1468Q9P260 1216 aa8.93□□□□□ -0.98
PCM1-208ENST00000518877 C6orf132Q5T0Z8 1188 aa8.92□□□□□ -0.98
PCM1-208ENST00000518877 LAPTM4BQ86VI4 370 aa8.92□□□□□ -0.98
PCM1-208ENST00000518877 IRX2Q9BZI1 471 aaPredicted RBP8.92□□□□□ -0.98
PCM1-208ENST00000518877 CAMK2BQ13554 666 aa8.91□□□□□ -0.98
PCM1-208ENST00000518877 RBM33Q96EV2 1170 aaKnown RBP8.91□□□□□ -0.98
PCM1-208ENST00000518877 ZFRQ96KR1 1074 aaKnown RBP8.91□□□□□ -0.98
PCM1-208ENST00000518877 SOWAHBA6NEL2 793 aa8.9□□□□□ -0.98
PCM1-208ENST00000518877 SEPT9Q9UHD8 586 aaPredicted RBP8.9□□□□□ -0.98
PCM1-208ENST00000518877 DDX12PQ92771 950 aa8.89□□□□□ -0.99
PCM1-208ENST00000518877 ONECUT3O60422 494 aaPredicted RBP8.88□□□□□ -0.99
PCM1-208ENST00000518877 TRIM6-TRIM34B2RNG4 842 aa8.87□□□□□ -0.99
PCM1-208ENST00000518877 ITGBL1O95965 494 aaPredicted RBP8.86□□□□□ -0.99
PCM1-208ENST00000518877 NYAP1Q6ZVC0 841 aa8.86□□□□□ -0.99
PCM1-208ENST00000518877 WBP1LQ9NX94 342 aa8.86□□□□□ -0.99
PCM1-208ENST00000518877 NBR1Q14596 966 aa8.85□□□□□ -0.99
PCM1-208ENST00000518877 FAM98CQ17RN3 349 aaKnown RBP8.85□□□□□ -0.99
PCM1-208ENST00000518877 MAP3K7O43318 606 aa8.84□□□□□ -0.99
PCM1-208ENST00000518877 BBXQ8WY36 941 aaPredicted RBP8.84□□□□□ -0.99
PCM1-208ENST00000518877 LRCH3Q96II8 777 aa8.84□□□□□ -0.99
PCM1-208ENST00000518877 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.84□□□□□ -0.99
PCM1-208ENST00000518877 KCNC4Q03721 635 aa8.83□□□□□ -1
PCM1-208ENST00000518877 HPS5Q9UPZ3 1129 aa8.83□□□□□ -1
PCM1-208ENST00000518877 EN1Q05925 392 aaPredicted RBP8.82□□□□□ -1
PCM1-208ENST00000518877 TSR1Q2NL82 804 aaKnown RBP8.81□□□□□ -1
PCM1-208ENST00000518877 PACS2Q86VP3 889 aa8.81□□□□□ -1
PCM1-208ENST00000518877 TSR3Q9UJK0 312 aaKnown RBP8.81□□□□□ -1
PCM1-208ENST00000518877 PDIA6Q15084 440 aa8.79□□□□□ -1
PCM1-208ENST00000518877 TSKSQ9UJT2 592 aa8.79□□□□□ -1
PCM1-208ENST00000518877 SPDYE16A6NNV3 312 aaPredicted RBP8.78□□□□□ -1
PCM1-208ENST00000518877 SPRYD3Q8NCJ5 442 aa8.78□□□□□ -1
PCM1-208ENST00000518877 PPP4CP60510 307 aa8.77□□□□□ -1.01
PCM1-208ENST00000518877 GRXCR2A6NFK2 248 aa8.76□□□□□ -1.01
PCM1-208ENST00000518877 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.76□□□□□ -1.01
PCM1-208ENST00000518877 SMAPO00193 183 aa8.75□□□□□ -1.01
PCM1-208ENST00000518877 E2F4Q16254 413 aa8.75□□□□□ -1.01
PCM1-208ENST00000518877 CDCA7LQ96GN5 454 aa8.75□□□□□ -1.01
PCM1-208ENST00000518877 WDR70Q9NW82 654 aa8.75□□□□□ -1.01
PCM1-208ENST00000518877 PRSS12P56730 875 aa8.74□□□□□ -1.01
PCM1-208ENST00000518877 Q6ZNB5 142 aa8.74□□□□□ -1.01
PCM1-208ENST00000518877 SAMD7Q7Z3H4 446 aa8.73□□□□□ -1.01
PCM1-208ENST00000518877 CERKQ8TCT0 537 aa8.73□□□□□ -1.01
PCM1-208ENST00000518877 PNMA3Q9UL41 463 aa8.72□□□□□ -1.01
PCM1-208ENST00000518877 NBPF26B4DH59 902 aa8.71□□□□□ -1.02
PCM1-208ENST00000518877 RNF40O75150 1001 aa8.71□□□□□ -1.02
PCM1-208ENST00000518877 CFAP44Q96MT7 982 aa8.71□□□□□ -1.02
PCM1-208ENST00000518877 TATDN2Q93075 761 aa8.7□□□□□ -1.02
PCM1-208ENST00000518877 HDGFP51858 240 aaKnown RBP8.69□□□□□ -1.02
PCM1-208ENST00000518877 FAM198AQ9UFP1 575 aa8.69□□□□□ -1.02
PCM1-208ENST00000518877 PRIM1P49642 420 aaKnown RBP8.68□□□□□ -1.02
PCM1-208ENST00000518877 PAXIP1Q6ZW49 1069 aaPredicted RBP8.68□□□□□ -1.02
PCM1-208ENST00000518877 CDHR5Q9HBB8 845 aa8.67□□□□□ -1.02
PCM1-208ENST00000518877 TJAP1Q5JTD0 557 aa8.66□□□□□ -1.02
PCM1-208ENST00000518877 NUDT18Q6ZVK8 323 aa8.66□□□□□ -1.02
PCM1-208ENST00000518877 MTRQ99707 1265 aa8.66□□□□□ -1.02
PCM1-208ENST00000518877 IL21Q9HBE4 155 aa8.66□□□□□ -1.02
PCM1-208ENST00000518877 C3orf80F5H4A9 247 aa8.65□□□□□ -1.02
PCM1-208ENST00000518877 LAPTM4AQ15012 233 aa8.65□□□□□ -1.02
PCM1-208ENST00000518877 ARIH1Q9Y4X5 557 aaPredicted RBP8.65□□□□□ -1.02
PCM1-208ENST00000518877 GFRA3O60609 400 aa8.64□□□□□ -1.03
PCM1-208ENST00000518877 OSBPP22059 807 aa8.64□□□□□ -1.03
PCM1-208ENST00000518877 PRKD2Q9BZL6 878 aa8.63□□□□□ -1.03
PCM1-208ENST00000518877 RBM27Q9P2N5 1060 aaKnown RBP8.62□□□□□ -1.03
PCM1-208ENST00000518877 PPP1R18Q6NYC8 613 aa8.61□□□□□ -1.03
PCM1-208ENST00000518877 NECTIN2Q92692 538 aa8.61□□□□□ -1.03
PCM1-208ENST00000518877 APLP1P51693 650 aa8.6□□□□□ -1.03
PCM1-208ENST00000518877 AMER1Q5JTC6 1135 aaPredicted RBP8.6□□□□□ -1.03
PCM1-208ENST00000518877 PADI6Q6TGC4 694 aa8.6□□□□□ -1.03
PCM1-208ENST00000518877 ZNF516Q92618 1163 aa8.6□□□□□ -1.03
PCM1-208ENST00000518877 SLC4A3P48751 1232 aa8.59□□□□□ -1.03
PCM1-208ENST00000518877 SWT1Q5T5J6 900 aaKnown RBP8.59□□□□□ -1.03
PCM1-208ENST00000518877 SLF2Q8IX21 1173 aa8.58□□□□□ -1.04
PCM1-208ENST00000518877 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.58□□□□□ -1.04
PCM1-208ENST00000518877 COPS2P61201 443 aa8.57□□□□□ -1.04
PCM1-208ENST00000518877 TRAF7Q6Q0C0 670 aa8.56□□□□□ -1.04
PCM1-208ENST00000518877 V9GY48 417 aaPredicted RBP8.56□□□□□ -1.04
PCM1-208ENST00000518877 GGCXP38435 758 aa8.55□□□□□ -1.04
PCM1-208ENST00000518877 NKX2-3Q8TAU0 364 aa8.55□□□□□ -1.04
PCM1-208ENST00000518877 NRG2O14511 850 aaPredicted RBP8.54□□□□□ -1.04
PCM1-208ENST00000518877 TTC13Q8NBP0 860 aa8.54□□□□□ -1.04
PCM1-208ENST00000518877 RTN4Q9NQC3 1192 aaKnown RBP8.54□□□□□ -1.04
PCM1-208ENST00000518877 NPDC1Q9NQX5 325 aaPredicted RBP8.54□□□□□ -1.04
PCM1-208ENST00000518877 PRR14Q9BWN1 585 aa8.51□□□□□ -1.05
PCM1-208ENST00000518877 LCE2BO14633 110 aa8.5□□□□□ -1.05
PCM1-208ENST00000518877 PDZRN3Q9UPQ7 1066 aa8.5□□□□□ -1.05
PCM1-208ENST00000518877 PCDHB3Q9Y5E6 796 aa8.5□□□□□ -1.05
PCM1-208ENST00000518877 ZPR1O75312 459 aa8.49□□□□□ -1.05
PCM1-208ENST00000518877 EYA1Q99502 592 aa8.49□□□□□ -1.05
PCM1-208ENST00000518877 MLLT3P42568 568 aaPredicted RBP8.48□□□□□ -1.05
PCM1-208ENST00000518877 TMUB1Q9BVT8 246 aa8.47□□□□□ -1.05
PCM1-208ENST00000518877 DNAJB2P25686 324 aa8.46□□□□□ -1.06
PCM1-208ENST00000518877 BLOC1S3Q6QNY0 202 aa8.46□□□□□ -1.06
PCM1-208ENST00000518877 RBM46Q8TBY0 533 aaKnown RBP8.46□□□□□ -1.06
PCM1-208ENST00000518877 ARHGEF1Q92888 912 aaKnown RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms