RNA–Protein interactions for RNA: ENST00000518504.5

SMN1-210, Transcript of survival of motor neuron 1, telomeric, humanhuman

TSL 5

Gene SMN1, Length 453 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-210ENST00000518504 ANKK1Q8NFD2 765 aa11.35□□□□□ -0.59
SMN1-210ENST00000518504 IRX2Q9BZI1 471 aaPredicted RBP11.34□□□□□ -0.59
SMN1-210ENST00000518504 PHF14O94880 888 aa11.33□□□□□ -0.6
SMN1-210ENST00000518504 KIAA1468Q9P260 1216 aa11.33□□□□□ -0.6
SMN1-210ENST00000518504 RGS20O76081 388 aa11.32□□□□□ -0.6
SMN1-210ENST00000518504 FBXW7Q969H0 707 aa11.32□□□□□ -0.6
SMN1-210ENST00000518504 DPYSL4O14531 572 aa11.31□□□□□ -0.6
SMN1-210ENST00000518504 RBM33Q96EV2 1170 aaKnown RBP11.31□□□□□ -0.6
SMN1-210ENST00000518504 SEPT9Q9UHD8 586 aaPredicted RBP11.31□□□□□ -0.6
SMN1-210ENST00000518504 C6orf132Q5T0Z8 1188 aa11.29□□□□□ -0.6
SMN1-210ENST00000518504 ZFRQ96KR1 1074 aaKnown RBP11.29□□□□□ -0.6
SMN1-210ENST00000518504 SOWAHBA6NEL2 793 aa11.28□□□□□ -0.6
SMN1-210ENST00000518504 WBP1LQ9NX94 342 aa11.27□□□□□ -0.61
SMN1-210ENST00000518504 DDX12PQ92771 950 aa11.26□□□□□ -0.61
SMN1-210ENST00000518504 ITGBL1O95965 494 aaPredicted RBP11.25□□□□□ -0.61
SMN1-210ENST00000518504 LAPTM4BQ86VI4 370 aa11.25□□□□□ -0.61
SMN1-210ENST00000518504 CAMK2BQ13554 666 aa11.24□□□□□ -0.61
SMN1-210ENST00000518504 EPAS1Q99814 870 aa11.24□□□□□ -0.61
SMN1-210ENST00000518504 TRIM6-TRIM34B2RNG4 842 aa11.23□□□□□ -0.61
SMN1-210ENST00000518504 ONECUT3O60422 494 aaPredicted RBP11.19□□□□□ -0.62
SMN1-210ENST00000518504 KCNC4Q03721 635 aa11.19□□□□□ -0.62
SMN1-210ENST00000518504 HPS5Q9UPZ3 1129 aa11.19□□□□□ -0.62
SMN1-210ENST00000518504 FAM98CQ17RN3 349 aaKnown RBP11.18□□□□□ -0.62
SMN1-210ENST00000518504 TSR1Q2NL82 804 aaKnown RBP11.18□□□□□ -0.62
SMN1-210ENST00000518504 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.18□□□□□ -0.62
SMN1-210ENST00000518504 NBR1Q14596 966 aa11.17□□□□□ -0.62
SMN1-210ENST00000518504 NYAP1Q6ZVC0 841 aa11.16□□□□□ -0.62
SMN1-210ENST00000518504 LRCH3Q96II8 777 aa11.16□□□□□ -0.62
SMN1-210ENST00000518504 TSKSQ9UJT2 592 aa11.16□□□□□ -0.62
SMN1-210ENST00000518504 MAP3K7O43318 606 aa11.15□□□□□ -0.62
SMN1-210ENST00000518504 TSR3Q9UJK0 312 aaKnown RBP11.15□□□□□ -0.62
SMN1-210ENST00000518504 Q6ZNB5 142 aa11.14□□□□□ -0.63
SMN1-210ENST00000518504 SMAPO00193 183 aa11.13□□□□□ -0.63
SMN1-210ENST00000518504 EN1Q05925 392 aaPredicted RBP11.13□□□□□ -0.63
SMN1-210ENST00000518504 PACS2Q86VP3 889 aa11.11□□□□□ -0.63
SMN1-210ENST00000518504 PPP4CP60510 307 aa11.08□□□□□ -0.64
SMN1-210ENST00000518504 PDIA6Q15084 440 aa11.08□□□□□ -0.64
SMN1-210ENST00000518504 C3orf80F5H4A9 247 aa11.07□□□□□ -0.64
SMN1-210ENST00000518504 PRIM1P49642 420 aaKnown RBP11.07□□□□□ -0.64
SMN1-210ENST00000518504 SAMD7Q7Z3H4 446 aa11.07□□□□□ -0.64
SMN1-210ENST00000518504 FAM198AQ9UFP1 575 aa11.07□□□□□ -0.64
SMN1-210ENST00000518504 CDCA7LQ96GN5 454 aa11.06□□□□□ -0.64
SMN1-210ENST00000518504 GRXCR2A6NFK2 248 aa11.05□□□□□ -0.64
SMN1-210ENST00000518504 BBXQ8WY36 941 aaPredicted RBP11.04□□□□□ -0.64
SMN1-210ENST00000518504 PRSS12P56730 875 aa11.03□□□□□ -0.64
SMN1-210ENST00000518504 SPDYE16A6NNV3 312 aaPredicted RBP11.02□□□□□ -0.65
SMN1-210ENST00000518504 TJAP1Q5JTD0 557 aa11.02□□□□□ -0.65
SMN1-210ENST00000518504 PNMA3Q9UL41 463 aa11.01□□□□□ -0.65
SMN1-210ENST00000518504 RNF40O75150 1001 aa11□□□□□ -0.65
SMN1-210ENST00000518504 TATDN2Q93075 761 aa11□□□□□ -0.65
SMN1-210ENST00000518504 CDHR5Q9HBB8 845 aa11□□□□□ -0.65
SMN1-210ENST00000518504 GFRA3O60609 400 aa10.99□□□□□ -0.65
SMN1-210ENST00000518504 MTRQ99707 1265 aa10.99□□□□□ -0.65
SMN1-210ENST00000518504 LCE2BO14633 110 aa10.98□□□□□ -0.65
SMN1-210ENST00000518504 E2F4Q16254 413 aa10.98□□□□□ -0.65
SMN1-210ENST00000518504 SPRYD3Q8NCJ5 442 aa10.98□□□□□ -0.65
SMN1-210ENST00000518504 ZNF516Q92618 1163 aa10.97□□□□□ -0.65
SMN1-210ENST00000518504 PRKD2Q9BZL6 878 aa10.97□□□□□ -0.65
SMN1-210ENST00000518504 NBPF26B4DH59 902 aa10.96□□□□□ -0.65
SMN1-210ENST00000518504 NUDT18Q6ZVK8 323 aa10.96□□□□□ -0.65
SMN1-210ENST00000518504 PPP1R18Q6NYC8 613 aa10.95□□□□□ -0.66
SMN1-210ENST00000518504 CERKQ8TCT0 537 aa10.94□□□□□ -0.66
SMN1-210ENST00000518504 IL21Q9HBE4 155 aa10.94□□□□□ -0.66
SMN1-210ENST00000518504 OSBPP22059 807 aa10.93□□□□□ -0.66
SMN1-210ENST00000518504 APLP1P51693 650 aa10.93□□□□□ -0.66
SMN1-210ENST00000518504 WDR70Q9NW82 654 aa10.92□□□□□ -0.66
SMN1-210ENST00000518504 LAPTM4AQ15012 233 aa10.91□□□□□ -0.66
SMN1-210ENST00000518504 TRAF7Q6Q0C0 670 aa10.91□□□□□ -0.66
SMN1-210ENST00000518504 CFAP44Q96MT7 982 aa10.91□□□□□ -0.66
SMN1-210ENST00000518504 NKX2-3Q8TAU0 364 aa10.9□□□□□ -0.66
SMN1-210ENST00000518504 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.9□□□□□ -0.66
SMN1-210ENST00000518504 HDGFP51858 240 aaKnown RBP10.89□□□□□ -0.67
SMN1-210ENST00000518504 PAXIP1Q6ZW49 1069 aaPredicted RBP10.89□□□□□ -0.67
SMN1-210ENST00000518504 COPS2P61201 443 aa10.88□□□□□ -0.67
SMN1-210ENST00000518504 PADI6Q6TGC4 694 aa10.88□□□□□ -0.67
SMN1-210ENST00000518504 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.88□□□□□ -0.67
SMN1-210ENST00000518504 SWT1Q5T5J6 900 aaKnown RBP10.87□□□□□ -0.67
SMN1-210ENST00000518504 ARIH1Q9Y4X5 557 aaPredicted RBP10.87□□□□□ -0.67
SMN1-210ENST00000518504 NPDC1Q9NQX5 325 aaPredicted RBP10.84□□□□□ -0.67
SMN1-210ENST00000518504 NRG2O14511 850 aaPredicted RBP10.83□□□□□ -0.68
SMN1-210ENST00000518504 RBM27Q9P2N5 1060 aaKnown RBP10.83□□□□□ -0.68
SMN1-210ENST00000518504 V9GY48 417 aaPredicted RBP10.83□□□□□ -0.68
SMN1-210ENST00000518504 TTC13Q8NBP0 860 aa10.81□□□□□ -0.68
SMN1-210ENST00000518504 PDZRN3Q9UPQ7 1066 aa10.8□□□□□ -0.68
SMN1-210ENST00000518504 SLF2Q8IX21 1173 aa10.79□□□□□ -0.68
SMN1-210ENST00000518504 EYA1Q99502 592 aa10.76□□□□□ -0.69
SMN1-210ENST00000518504 ZPR1O75312 459 aa10.75□□□□□ -0.69
SMN1-210ENST00000518504 GGCXP38435 758 aa10.75□□□□□ -0.69
SMN1-210ENST00000518504 MLLT3P42568 568 aaPredicted RBP10.75□□□□□ -0.69
SMN1-210ENST00000518504 NECTIN2Q92692 538 aa10.74□□□□□ -0.69
SMN1-210ENST00000518504 BLOC1S3Q6QNY0 202 aa10.73□□□□□ -0.69
SMN1-210ENST00000518504 PCDHB3Q9Y5E6 796 aa10.73□□□□□ -0.69
SMN1-210ENST00000518504 ZNF787Q6DD87 383 aa10.72□□□□□ -0.69
SMN1-210ENST00000518504 TLL1O43897 1013 aa10.71□□□□□ -0.69
SMN1-210ENST00000518504 SLC4A3P48751 1232 aa10.71□□□□□ -0.69
SMN1-210ENST00000518504 RNF223E7ERA6 249 aa10.69□□□□□ -0.7
SMN1-210ENST00000518504 FAM161AQ3B820 660 aa10.69□□□□□ -0.7
SMN1-210ENST00000518504 EMID1Q96A84 441 aaPredicted RBP10.69□□□□□ -0.7
SMN1-210ENST00000518504 TMUB1Q9BVT8 246 aa10.69□□□□□ -0.7
SMN1-210ENST00000518504 PPEF1O14829 653 aaPredicted RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms