RNA–Protein interactions for RNA: ENST00000518376.1

CASC11-202, Transcript of cancer susceptibility 11, humanhuman

TSL 3

Gene CASC11, Length 872 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC11-202ENST00000518376 ARHGEF11O15085 1522 aa13.61□□□□□ -0.23
CASC11-202ENST00000518376 CEP170Q5SW79 1584 aa13.59□□□□□ -0.23
CASC11-202ENST00000518376 LARP6Q9BRS8 491 aaKnown RBP13.59□□□□□ -0.23
CASC11-202ENST00000518376 IQGAP2Q13576 1575 aa13.58□□□□□ -0.23
CASC11-202ENST00000518376 VPS8Q8N3P4 1428 aa13.58□□□□□ -0.24
CASC11-202ENST00000518376 C3orf67Q6ZVT6 689 aa13.58□□□□□ -0.24
CASC11-202ENST00000518376 CHMP7Q8WUX9 453 aaPredicted RBP13.58□□□□□ -0.24
CASC11-202ENST00000518376 NUP160Q12769 1436 aa13.57□□□□□ -0.24
CASC11-202ENST00000518376 C2orf72A6NCS6 295 aa13.57□□□□□ -0.24
CASC11-202ENST00000518376 KIF3CO14782 793 aa13.57□□□□□ -0.24
CASC11-202ENST00000518376 EFCAB5A4FU69 1503 aa13.57□□□□□ -0.24
CASC11-202ENST00000518376 CLASP1Q7Z460 1538 aa13.56□□□□□ -0.24
CASC11-202ENST00000518376 KIAA0586Q9BVV6 1533 aa13.56□□□□□ -0.24
CASC11-202ENST00000518376 PDE4AP27815 886 aa13.56□□□□□ -0.24
CASC11-202ENST00000518376 GPHNQ9NQX3 736 aaPredicted RBP13.56□□□□□ -0.24
CASC11-202ENST00000518376 SAMD9Q5K651 1589 aa13.55□□□□□ -0.24
CASC11-202ENST00000518376 MFSD10Q14728 455 aa13.54□□□□□ -0.24
CASC11-202ENST00000518376 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.53□□□□□ -0.24
CASC11-202ENST00000518376 UGGT2Q9NYU1 1516 aa13.53□□□□□ -0.24
CASC11-202ENST00000518376 DSG2Q14126 1118 aa13.52□□□□□ -0.25
CASC11-202ENST00000518376 LHX8Q68G74 356 aa13.52□□□□□ -0.25
CASC11-202ENST00000518376 TMC2Q8TDI7 906 aa13.52□□□□□ -0.25
CASC11-202ENST00000518376 FHOD3Q2V2M9 1422 aa13.52□□□□□ -0.25
CASC11-202ENST00000518376 DDX27Q96GQ7 796 aaKnown RBP13.5□□□□□ -0.25
CASC11-202ENST00000518376 OTUD5Q96G74 571 aa13.49□□□□□ -0.25
CASC11-202ENST00000518376 PPP1R15BQ5SWA1 713 aa13.48□□□□□ -0.25
CASC11-202ENST00000518376 P3H3Q8IVL6 736 aa13.48□□□□□ -0.25
CASC11-202ENST00000518376 WDR70Q9NW82 654 aa13.48□□□□□ -0.25
CASC11-202ENST00000518376 FOXK1P85037 733 aa13.47□□□□□ -0.25
CASC11-202ENST00000518376 DISP1Q96F81 1524 aa13.47□□□□□ -0.25
CASC11-202ENST00000518376 SCUBE2Q9NQ36 999 aa13.46□□□□□ -0.25
CASC11-202ENST00000518376 KIAA0556O60303 1618 aa13.46□□□□□ -0.26
CASC11-202ENST00000518376 PCF11O94913 1555 aaKnown RBP13.45□□□□□ -0.26
CASC11-202ENST00000518376 MAMSTRQ6ZN01 415 aa13.45□□□□□ -0.26
CASC11-202ENST00000518376 CYB5RLQ6IPT4 315 aa13.44□□□□□ -0.26
CASC11-202ENST00000518376 PLPP6Q8IY26 295 aa13.44□□□□□ -0.26
CASC11-202ENST00000518376 SLAIN1Q8ND83 568 aa13.44□□□□□ -0.26
CASC11-202ENST00000518376 FMN1Q68DA7 1419 aa13.42□□□□□ -0.26
CASC11-202ENST00000518376 KCNV2Q8TDN2 545 aa13.42□□□□□ -0.26
CASC11-202ENST00000518376 PPARGC1BQ86YN6 1023 aaKnown RBP13.41□□□□□ -0.26
CASC11-202ENST00000518376 JPH4Q96JJ6 628 aa13.41□□□□□ -0.26
CASC11-202ENST00000518376 SHROOM2Q13796 1616 aa13.41□□□□□ -0.26
CASC11-202ENST00000518376 FYCO1Q9BQS8 1478 aa13.41□□□□□ -0.26
CASC11-202ENST00000518376 CASKIN1Q8WXD9 1431 aa13.4□□□□□ -0.26
CASC11-202ENST00000518376 E2F4Q16254 413 aa13.4□□□□□ -0.26
CASC11-202ENST00000518376 CAMK2BQ13554 666 aa13.39□□□□□ -0.27
CASC11-202ENST00000518376 EMILIN3Q9NT22 766 aa13.37□□□□□ -0.27
CASC11-202ENST00000518376 MAP3K1Q13233 1512 aa13.37□□□□□ -0.27
CASC11-202ENST00000518376 CARMIL2Q6F5E8 1435 aa13.37□□□□□ -0.27
CASC11-202ENST00000518376 TIAM1Q13009 1591 aa13.37□□□□□ -0.27
CASC11-202ENST00000518376 CFAP43Q8NDM7 1665 aa13.36□□□□□ -0.27
CASC11-202ENST00000518376 PRG4Q92954 1404 aaPredicted RBP13.36□□□□□ -0.27
CASC11-202ENST00000518376 LRRIQ1Q96JM4 1722 aa13.33□□□□□ -0.27
CASC11-202ENST00000518376 HECW1Q76N89 1606 aa13.33□□□□□ -0.28
CASC11-202ENST00000518376 TTBK1Q5TCY1 1321 aaPredicted RBP13.33□□□□□ -0.28
CASC11-202ENST00000518376 ERCC6L2Q5T890 1561 aa13.32□□□□□ -0.28
CASC11-202ENST00000518376 TRIM26Q12899 539 aaPredicted RBP13.32□□□□□ -0.28
CASC11-202ENST00000518376 KANK4Q5T7N3 995 aaPredicted RBP13.32□□□□□ -0.28
CASC11-202ENST00000518376 HOXB3P14651 431 aaPredicted RBP13.31□□□□□ -0.28
CASC11-202ENST00000518376 ATP1B4Q9UN42 357 aaPredicted RBP13.3□□□□□ -0.28
CASC11-202ENST00000518376 RAPGEF6Q8TEU7 1601 aa13.3□□□□□ -0.28
CASC11-202ENST00000518376 UPF1Q92900 1129 aaKnown RBP eCLIP13.29□□□□□ -0.28
CASC11-202ENST00000518376 LRRC9Q6ZRR7 1453 aa13.29□□□□□ -0.28
CASC11-202ENST00000518376 PCGF6Q9BYE7 350 aa13.28□□□□□ -0.28
CASC11-202ENST00000518376 NUP153P49790 1475 aaKnown RBP13.28□□□□□ -0.28
CASC11-202ENST00000518376 PLB1Q6P1J6 1458 aa13.28□□□□□ -0.28
CASC11-202ENST00000518376 ABCA8O94911 1581 aa13.28□□□□□ -0.28
CASC11-202ENST00000518376 DPYSL4O14531 572 aa13.27□□□□□ -0.29
CASC11-202ENST00000518376 OXER1Q8TDS5 423 aa13.27□□□□□ -0.29
CASC11-202ENST00000518376 CCDC18Q5T9S5 1454 aa13.27□□□□□ -0.29
CASC11-202ENST00000518376 EPRSP07814 1512 aaKnown RBP13.27□□□□□ -0.29
CASC11-202ENST00000518376 CDK13Q14004 1512 aaKnown RBP13.26□□□□□ -0.29
CASC11-202ENST00000518376 PTPRGP23470 1445 aa13.25□□□□□ -0.29
CASC11-202ENST00000518376 ARHGEF1Q92888 912 aaKnown RBP13.25□□□□□ -0.29
CASC11-202ENST00000518376 SLC34A2O95436 690 aa13.24□□□□□ -0.29
CASC11-202ENST00000518376 ARIH1Q9Y4X5 557 aaPredicted RBP13.24□□□□□ -0.29
CASC11-202ENST00000518376 PTCD2Q8WV60 388 aaKnown RBP13.23□□□□□ -0.29
CASC11-202ENST00000518376 MAGI3Q5TCQ9 1506 aa13.23□□□□□ -0.29
CASC11-202ENST00000518376 EHBP1L1Q8N3D4 1523 aa13.21□□□□□ -0.29
CASC11-202ENST00000518376 ARID3CA6NKF2 412 aa13.2□□□□□ -0.3
CASC11-202ENST00000518376 UACAQ9BZF9 1416 aa13.2□□□□□ -0.3
CASC11-202ENST00000518376 MTUS2Q5JR59 1369 aa13.2□□□□□ -0.3
CASC11-202ENST00000518376 DOK7Q18PE1 504 aa13.19□□□□□ -0.3
CASC11-202ENST00000518376 KHSRPQ92945 711 aaKnown RBP eCLIP13.19□□□□□ -0.3
CASC11-202ENST00000518376 PCDHGA4Q9Y5G9 962 aa13.19□□□□□ -0.3
CASC11-202ENST00000518376 MAP3K9P80192 1104 aa13.18□□□□□ -0.3
CASC11-202ENST00000518376 ABCC2Q92887 1545 aa13.17□□□□□ -0.3
CASC11-202ENST00000518376 PHLDB1Q86UU1 1377 aa13.17□□□□□ -0.3
CASC11-202ENST00000518376 ATP10BO94823 1461 aa13.16□□□□□ -0.3
CASC11-202ENST00000518376 ARSIQ5FYB1 569 aa13.16□□□□□ -0.3
CASC11-202ENST00000518376 SUPT6HQ7KZ85 1726 aaKnown RBP13.16□□□□□ -0.3
CASC11-202ENST00000518376 RRBP1Q9P2E9 1410 aaKnown RBP13.15□□□□□ -0.3
CASC11-202ENST00000518376 SEMA3EO15041 775 aa13.15□□□□□ -0.3
CASC11-202ENST00000518376 GPR153Q6NV75 609 aa13.15□□□□□ -0.3
CASC11-202ENST00000518376 UHRF1BP1LA0JNW5 1464 aa13.15□□□□□ -0.3
CASC11-202ENST00000518376 PDIA6Q15084 440 aa13.14□□□□□ -0.31
CASC11-202ENST00000518376 NCOA2Q15596 1464 aa13.14□□□□□ -0.31
CASC11-202ENST00000518376 KDM4FA0A1W2PPD8 638 aa13.13□□□□□ -0.31
CASC11-202ENST00000518376 SNPHO15079 494 aa13.13□□□□□ -0.31
CASC11-202ENST00000518376 BCANQ96GW7 911 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms