RNA–Protein interactions for RNA: ENST00000518371.2

MRPS28-203, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-203ENST00000518371 RIMBP3CA6NJZ7 1639 aa10.15□□□□□ -0.78
MRPS28-203ENST00000518371 RIMBP3BA6NNM3 1639 aa10.15□□□□□ -0.78
MRPS28-203ENST00000518371 RIMBP3Q9UFD9 1639 aa10.15□□□□□ -0.78
MRPS28-203ENST00000518371 RGL2O15211 777 aa10.15□□□□□ -0.78
MRPS28-203ENST00000518371 FAM9AQ8IZU1 332 aaPredicted RBP10.15□□□□□ -0.78
MRPS28-203ENST00000518371 CEP170Q5SW79 1584 aa10.14□□□□□ -0.79
MRPS28-203ENST00000518371 MS4A4AQ96JQ5 239 aa10.12□□□□□ -0.79
MRPS28-203ENST00000518371 BCL11BQ9C0K0 894 aaPredicted RBP10.12□□□□□ -0.79
MRPS28-203ENST00000518371 PHF8Q9UPP1 1060 aa10.12□□□□□ -0.79
MRPS28-203ENST00000518371 CUL7Q14999 1698 aa10.12□□□□□ -0.79
MRPS28-203ENST00000518371 RAPGEF2Q9Y4G8 1499 aa10.11□□□□□ -0.79
MRPS28-203ENST00000518371 ARAP1Q96P48 1450 aa10.1□□□□□ -0.79
MRPS28-203ENST00000518371 PRG4Q92954 1404 aaPredicted RBP10.1□□□□□ -0.79
MRPS28-203ENST00000518371 SOX12O15370 315 aa10.1□□□□□ -0.79
MRPS28-203ENST00000518371 PBX2P40425 430 aa10.1□□□□□ -0.79
MRPS28-203ENST00000518371 KIAA0586Q9BVV6 1533 aa10.1□□□□□ -0.79
MRPS28-203ENST00000518371 STK24Q9Y6E0 443 aa10.09□□□□□ -0.79
MRPS28-203ENST00000518371 TAOK2Q9UL54 1235 aa10.08□□□□□ -0.8
MRPS28-203ENST00000518371 EEA1Q15075 1411 aa10.07□□□□□ -0.8
MRPS28-203ENST00000518371 POTEEQ6S8J3 1075 aa10.07□□□□□ -0.8
MRPS28-203ENST00000518371 TTBK1Q5TCY1 1321 aaPredicted RBP10.07□□□□□ -0.8
MRPS28-203ENST00000518371 STK25O00506 426 aa10.06□□□□□ -0.8
MRPS28-203ENST00000518371 AXIN2Q9Y2T1 843 aa10.06□□□□□ -0.8
MRPS28-203ENST00000518371 FBXO22Q8NEZ5 403 aa10.05□□□□□ -0.8
MRPS28-203ENST00000518371 ERCC6L2Q5T890 1561 aa10.05□□□□□ -0.8
MRPS28-203ENST00000518371 PRXQ9BXM0 1461 aa10.04□□□□□ -0.8
MRPS28-203ENST00000518371 CARMIL2Q6F5E8 1435 aa10.03□□□□□ -0.8
MRPS28-203ENST00000518371 MFRPQ9BY79 579 aa10.03□□□□□ -0.8
MRPS28-203ENST00000518371 SHROOM2Q13796 1616 aa10.03□□□□□ -0.8
MRPS28-203ENST00000518371 NUDT7P0C024 238 aa10.02□□□□□ -0.81
MRPS28-203ENST00000518371 PTPRGP23470 1445 aa10□□□□□ -0.81
MRPS28-203ENST00000518371 RANGAP1P46060 587 aaPredicted RBP10□□□□□ -0.81
MRPS28-203ENST00000518371 LHX6Q9UPM6 363 aa10□□□□□ -0.81
MRPS28-203ENST00000518371 IQGAP2Q13576 1575 aa10□□□□□ -0.81
MRPS28-203ENST00000518371 TNIKQ9UKE5 1360 aa10□□□□□ -0.81
MRPS28-203ENST00000518371 UBTFP17480 764 aaKnown RBP9.99□□□□□ -0.81
MRPS28-203ENST00000518371 NLRP6P59044 892 aa9.99□□□□□ -0.81
MRPS28-203ENST00000518371 ADGRD1Q6QNK2 874 aa9.99□□□□□ -0.81
MRPS28-203ENST00000518371 P3H3Q8IVL6 736 aa9.97□□□□□ -0.81
MRPS28-203ENST00000518371 DISP1Q96F81 1524 aa9.94□□□□□ -0.82
MRPS28-203ENST00000518371 UGGT2Q9NYU1 1516 aa9.94□□□□□ -0.82
MRPS28-203ENST00000518371 GOLGA3Q08378 1498 aa9.94□□□□□ -0.82
MRPS28-203ENST00000518371 ARHGAP33O14559 1287 aa9.94□□□□□ -0.82
MRPS28-203ENST00000518371 KIF3CO14782 793 aa9.92□□□□□ -0.82
MRPS28-203ENST00000518371 PCDHGA4Q9Y5G9 962 aa9.92□□□□□ -0.82
MRPS28-203ENST00000518371 SLC34A2O95436 690 aa9.91□□□□□ -0.82
MRPS28-203ENST00000518371 UACAQ9BZF9 1416 aa9.9□□□□□ -0.82
MRPS28-203ENST00000518371 C2orf72A6NCS6 295 aa9.9□□□□□ -0.82
MRPS28-203ENST00000518371 TK2O00142 265 aa9.9□□□□□ -0.82
MRPS28-203ENST00000518371 HRO43593 1189 aa9.9□□□□□ -0.82
MRPS28-203ENST00000518371 PPP1R37O75864 691 aa9.9□□□□□ -0.82
MRPS28-203ENST00000518371 RGS20O76081 388 aa9.9□□□□□ -0.82
MRPS28-203ENST00000518371 CTTNBP2Q8WZ74 1663 aa9.9□□□□□ -0.83
MRPS28-203ENST00000518371 KIF21BO75037 1637 aa9.89□□□□□ -0.83
MRPS28-203ENST00000518371 HS6ST3Q8IZP7 471 aa9.89□□□□□ -0.83
MRPS28-203ENST00000518371 KIAA0556O60303 1618 aa9.89□□□□□ -0.83
MRPS28-203ENST00000518371 FAM69CQ0P6D2 419 aa9.88□□□□□ -0.83
MRPS28-203ENST00000518371 KCTD12Q96CX2 325 aaKnown RBP9.88□□□□□ -0.83
MRPS28-203ENST00000518371 IRX2Q9BZI1 471 aaPredicted RBP9.88□□□□□ -0.83
MRPS28-203ENST00000518371 ARID3CA6NKF2 412 aa9.86□□□□□ -0.83
MRPS28-203ENST00000518371 CHGAP10645 457 aaKnown RBP9.86□□□□□ -0.83
MRPS28-203ENST00000518371 ADCY10Q96PN6 1610 aa9.85□□□□□ -0.83
MRPS28-203ENST00000518371 UHRF1BP1LA0JNW5 1464 aa9.85□□□□□ -0.83
MRPS28-203ENST00000518371 PSDA5PKW4 1024 aaPredicted RBP9.85□□□□□ -0.83
MRPS28-203ENST00000518371 DMRTA1Q5VZB9 504 aa9.85□□□□□ -0.83
MRPS28-203ENST00000518371 ABCC2Q92887 1545 aa9.85□□□□□ -0.83
MRPS28-203ENST00000518371 PLB1Q6P1J6 1458 aa9.85□□□□□ -0.83
MRPS28-203ENST00000518371 FHOD3Q2V2M9 1422 aa9.83□□□□□ -0.84
MRPS28-203ENST00000518371 NKX1-1Q15270 411 aaPredicted RBP9.83□□□□□ -0.84
MRPS28-203ENST00000518371 ATP1B4Q9UN42 357 aaPredicted RBP9.83□□□□□ -0.84
MRPS28-203ENST00000518371 PSEN2P49810 448 aa9.82□□□□□ -0.84
MRPS28-203ENST00000518371 KCNH8Q96L42 1107 aa9.82□□□□□ -0.84
MRPS28-203ENST00000518371 STAC3Q96MF2 364 aa9.82□□□□□ -0.84
MRPS28-203ENST00000518371 ASXL2Q76L83 1435 aa9.82□□□□□ -0.84
MRPS28-203ENST00000518371 IFFO2Q5TF58 517 aa9.81□□□□□ -0.84
MRPS28-203ENST00000518371 MAPKBP1O60336 1514 aa9.81□□□□□ -0.84
MRPS28-203ENST00000518371 KDM5BQ9UGL1 1544 aa9.81□□□□□ -0.84
MRPS28-203ENST00000518371 SAMD9Q5K651 1589 aa9.8□□□□□ -0.84
MRPS28-203ENST00000518371 ABCC10Q5T3U5 1492 aa9.8□□□□□ -0.84
MRPS28-203ENST00000518371 LOC105371045A0A1W2PR82 267 aa9.8□□□□□ -0.84
MRPS28-203ENST00000518371 EFCAB5A4FU69 1503 aa9.79□□□□□ -0.84
MRPS28-203ENST00000518371 ABCA8O94911 1581 aa9.79□□□□□ -0.84
MRPS28-203ENST00000518371 KDM4FA0A1W2PPD8 638 aa9.78□□□□□ -0.84
MRPS28-203ENST00000518371 PTPN5P54829 565 aa9.78□□□□□ -0.84
MRPS28-203ENST00000518371 PLEKHD1A6NEE1 506 aa9.77□□□□□ -0.85
MRPS28-203ENST00000518371 ATP10BO94823 1461 aa9.77□□□□□ -0.85
MRPS28-203ENST00000518371 ARHGAP35Q9NRY4 1499 aa9.77□□□□□ -0.85
MRPS28-203ENST00000518371 FMN1Q68DA7 1419 aa9.76□□□□□ -0.85
MRPS28-203ENST00000518371 TMC2Q8TDI7 906 aa9.76□□□□□ -0.85
MRPS28-203ENST00000518371 CLIP1P30622 1438 aa9.75□□□□□ -0.85
MRPS28-203ENST00000518371 ZCCHC11Q5TAX3 1644 aaKnown RBP9.74□□□□□ -0.85
MRPS28-203ENST00000518371 WDR7Q9Y4E6 1490 aa9.74□□□□□ -0.85
MRPS28-203ENST00000518371 EPRSP07814 1512 aaKnown RBP9.74□□□□□ -0.85
MRPS28-203ENST00000518371 A0A0G2JS52 829 aa9.74□□□□□ -0.85
MRPS28-203ENST00000518371 RAPGEF6Q8TEU7 1601 aa9.74□□□□□ -0.85
MRPS28-203ENST00000518371 DIP2BQ9P265 1576 aa9.73□□□□□ -0.85
MRPS28-203ENST00000518371 CDK11AQ9UQ88 783 aaPredicted RBP9.73□□□□□ -0.85
MRPS28-203ENST00000518371 NUP153P49790 1475 aaKnown RBP9.72□□□□□ -0.85
MRPS28-203ENST00000518371 PPP4R3BQ5MIZ7 849 aa9.71□□□□□ -0.86
MRPS28-203ENST00000518371 KIF13AQ9H1H9 1805 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms