RNA–Protein interactions for RNA: ENST00000518265.5

SRGAP3-211, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5

Gene SRGAP3, Length 1,799 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-211ENST00000518265 MIA2Q96PC5 1412 aa11.99□□□□□ -0.49
SRGAP3-211ENST00000518265 C14orf37Q86TY3 774 aa11.99□□□□□ -0.49
SRGAP3-211ENST00000518265 HOMEZQ8IX15 550 aa11.99□□□□□ -0.49
SRGAP3-211ENST00000518265 CD109Q6YHK3 1445 aa11.99□□□□□ -0.49
SRGAP3-211ENST00000518265 RNF25Q96BH1 459 aaPredicted RBP11.98□□□□□ -0.49
SRGAP3-211ENST00000518265 ARHGEF12Q9NZN5 1544 aa11.98□□□□□ -0.49
SRGAP3-211ENST00000518265 FANCAO15360 1455 aa11.97□□□□□ -0.49
SRGAP3-211ENST00000518265 ADGBQ8N7X0 1667 aa11.96□□□□□ -0.49
SRGAP3-211ENST00000518265 GLI2P10070 1586 aa11.96□□□□□ -0.49
SRGAP3-211ENST00000518265 ABCC1P33527 1531 aa11.96□□□□□ -0.5
SRGAP3-211ENST00000518265 DAPK1P53355 1430 aa11.95□□□□□ -0.5
SRGAP3-211ENST00000518265 KDM6BO15054 1643 aa11.95□□□□□ -0.5
SRGAP3-211ENST00000518265 ABCC5O15440 1437 aa11.95□□□□□ -0.5
SRGAP3-211ENST00000518265 RNF39Q9H2S5 420 aa11.95□□□□□ -0.5
SRGAP3-211ENST00000518265 RRP7BPQ9NSQ0 103 aa11.95□□□□□ -0.5
SRGAP3-211ENST00000518265 CAPN15O75808 1086 aa11.94□□□□□ -0.5
SRGAP3-211ENST00000518265 EFCAB2Q5VUJ9 269 aa11.94□□□□□ -0.5
SRGAP3-211ENST00000518265 TRAPPC8Q9Y2L5 1435 aa11.92□□□□□ -0.5
SRGAP3-211ENST00000518265 ADGRL1O94910 1474 aa11.92□□□□□ -0.5
SRGAP3-211ENST00000518265 MBD5Q9P267 1494 aa11.92□□□□□ -0.5
SRGAP3-211ENST00000518265 ZNF692Q9BU19 519 aaPredicted RBP11.92□□□□□ -0.5
SRGAP3-211ENST00000518265 AKNAQ7Z591 1439 aa11.92□□□□□ -0.5
SRGAP3-211ENST00000518265 CFAP74Q9C0B2 1584 aa11.91□□□□□ -0.5
SRGAP3-211ENST00000518265 ABCB7O75027 752 aa11.91□□□□□ -0.5
SRGAP3-211ENST00000518265 AFAP1Q8N556 730 aa11.91□□□□□ -0.5
SRGAP3-211ENST00000518265 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.91□□□□□ -0.5
SRGAP3-211ENST00000518265 ARAP3Q8WWN8 1544 aa11.91□□□□□ -0.5
SRGAP3-211ENST00000518265 ARHGEF5Q12774 1597 aa11.91□□□□□ -0.5
SRGAP3-211ENST00000518265 GCC2Q8IWJ2 1684 aa11.91□□□□□ -0.5
SRGAP3-211ENST00000518265 SCAPERQ9BY12 1400 aa11.9□□□□□ -0.5
SRGAP3-211ENST00000518265 GTPBP6O43824 516 aaPredicted RBP11.9□□□□□ -0.5
SRGAP3-211ENST00000518265 RICTORQ6R327 1708 aa11.9□□□□□ -0.5
SRGAP3-211ENST00000518265 CCDC141Q6ZP82 1450 aa11.89□□□□□ -0.51
SRGAP3-211ENST00000518265 RAPGEF3O95398 923 aa11.88□□□□□ -0.51
SRGAP3-211ENST00000518265 C9orf84Q5VXU9 1444 aa11.88□□□□□ -0.51
SRGAP3-211ENST00000518265 MYT1LQ9UL68 1186 aa11.87□□□□□ -0.51
SRGAP3-211ENST00000518265 KIDINS220Q9ULH0 1771 aa11.87□□□□□ -0.51
SRGAP3-211ENST00000518265 FRMPD1Q5SYB0 1578 aa11.86□□□□□ -0.51
SRGAP3-211ENST00000518265 RAB3GAP2Q9H2M9 1393 aa11.86□□□□□ -0.51
SRGAP3-211ENST00000518265 PLEKHH2Q8IVE3 1493 aa11.85□□□□□ -0.51
SRGAP3-211ENST00000518265 ZBTB12Q9Y330 459 aaPredicted RBP11.85□□□□□ -0.51
SRGAP3-211ENST00000518265 NAIPQ13075 1403 aa11.85□□□□□ -0.51
SRGAP3-211ENST00000518265 TSPY4P0CV99 314 aa11.84□□□□□ -0.51
SRGAP3-211ENST00000518265 TSPY10P0CW01 314 aa11.84□□□□□ -0.51
SRGAP3-211ENST00000518265 SETD5Q9C0A6 1442 aa11.84□□□□□ -0.51
SRGAP3-211ENST00000518265 KIAA1107Q9UPP5 1409 aa11.84□□□□□ -0.51
SRGAP3-211ENST00000518265 INO80Q9ULG1 1556 aaPredicted RBP11.84□□□□□ -0.51
SRGAP3-211ENST00000518265 ZFYVE16Q7Z3T8 1539 aa11.84□□□□□ -0.51
SRGAP3-211ENST00000518265 NEO1Q92859 1461 aa11.83□□□□□ -0.51
SRGAP3-211ENST00000518265 COL17A1Q9UMD9 1497 aaPredicted RBP11.83□□□□□ -0.51
SRGAP3-211ENST00000518265 MAST1Q9Y2H9 1570 aa11.83□□□□□ -0.52
SRGAP3-211ENST00000518265 NCOA1Q15788 1441 aa11.83□□□□□ -0.52
SRGAP3-211ENST00000518265 ATP7AQ04656 1500 aa11.82□□□□□ -0.52
SRGAP3-211ENST00000518265 ABCA6Q8N139 1617 aa11.82□□□□□ -0.52
SRGAP3-211ENST00000518265 SSUH2Q9Y2M2 353 aa11.82□□□□□ -0.52
SRGAP3-211ENST00000518265 SHANK2Q9UPX8 1470 aa11.82□□□□□ -0.52
SRGAP3-211ENST00000518265 SPAG9O60271 1321 aaKnown RBP11.82□□□□□ -0.52
SRGAP3-211ENST00000518265 HFM1A2PYH4 1435 aa11.82□□□□□ -0.52
SRGAP3-211ENST00000518265 POGZQ7Z3K3 1410 aa11.82□□□□□ -0.52
SRGAP3-211ENST00000518265 C1QBPQ07021 282 aaKnown RBP11.82□□□□□ -0.52
SRGAP3-211ENST00000518265 TEX14Q8IWB6 1497 aa11.82□□□□□ -0.52
SRGAP3-211ENST00000518265 HECW2Q9P2P5 1572 aa11.82□□□□□ -0.52
SRGAP3-211ENST00000518265 PLXNC1O60486 1568 aa11.81□□□□□ -0.52
SRGAP3-211ENST00000518265 DENND4BO75064 1496 aaPredicted RBP11.81□□□□□ -0.52
SRGAP3-211ENST00000518265 ADGRL2O95490 1459 aa11.81□□□□□ -0.52
SRGAP3-211ENST00000518265 KDM5CP41229 1560 aa11.8□□□□□ -0.52
SRGAP3-211ENST00000518265 CFAP65Q6ZU64 1925 aaKnown RBP11.8□□□□□ -0.52
SRGAP3-211ENST00000518265 ZNF518AQ6AHZ1 1483 aa11.8□□□□□ -0.52
SRGAP3-211ENST00000518265 ANKRD30AQ9BXX3 1397 aa11.8□□□□□ -0.52
SRGAP3-211ENST00000518265 SIGLEC1Q9BZZ2 1709 aa11.8□□□□□ -0.52
SRGAP3-211ENST00000518265 KIF15Q9NS87 1388 aa11.8□□□□□ -0.52
SRGAP3-211ENST00000518265 ROCK1Q13464 1354 aa11.78□□□□□ -0.52
SRGAP3-211ENST00000518265 YEATS2Q9ULM3 1422 aa11.78□□□□□ -0.52
SRGAP3-211ENST00000518265 CCER1Q8TC90 406 aaPredicted RBP11.77□□□□□ -0.52
SRGAP3-211ENST00000518265 TRIM52Q96A61 297 aa11.77□□□□□ -0.52
SRGAP3-211ENST00000518265 DIP2CQ9Y2E4 1556 aa11.77□□□□□ -0.53
SRGAP3-211ENST00000518265 RSPH4AQ5TD94 716 aa11.77□□□□□ -0.53
SRGAP3-211ENST00000518265 ANKRD50Q9ULJ7 1429 aa11.76□□□□□ -0.53
SRGAP3-211ENST00000518265 DHX57Q6P158 1386 aaKnown RBP11.74□□□□□ -0.53
SRGAP3-211ENST00000518265 DUOX2Q9NRD8 1548 aa11.74□□□□□ -0.53
SRGAP3-211ENST00000518265 CEP152O94986 1710 aa11.74□□□□□ -0.53
SRGAP3-211ENST00000518265 BRPF1P55201 1214 aaPredicted RBP11.73□□□□□ -0.53
SRGAP3-211ENST00000518265 ZBTB47Q9UFB7 747 aaPredicted RBP11.73□□□□□ -0.53
SRGAP3-211ENST00000518265 RTEL1-TNFRSF6BF6WH68 1400 aa11.72□□□□□ -0.53
SRGAP3-211ENST00000518265 ZMYM4Q5VZL5 1548 aa11.72□□□□□ -0.53
SRGAP3-211ENST00000518265 MLH3Q9UHC1 1453 aa11.72□□□□□ -0.53
SRGAP3-211ENST00000518265 SPDYE2BA6NHP3 402 aa11.72□□□□□ -0.53
SRGAP3-211ENST00000518265 STK25O00506 426 aa11.72□□□□□ -0.53
SRGAP3-211ENST00000518265 RIOK3O14730 519 aaKnown RBP11.72□□□□□ -0.53
SRGAP3-211ENST00000518265 SPDYE6P0CI01 402 aa11.72□□□□□ -0.53
SRGAP3-211ENST00000518265 SPDYE2Q495Y8 402 aa11.72□□□□□ -0.53
SRGAP3-211ENST00000518265 LMOD2Q6P5Q4 547 aa11.71□□□□□ -0.54
SRGAP3-211ENST00000518265 UNC13BO14795 1591 aa11.71□□□□□ -0.54
SRGAP3-211ENST00000518265 A2MP01023 1474 aa11.7□□□□□ -0.54
SRGAP3-211ENST00000518265 KIF3BO15066 747 aa11.69□□□□□ -0.54
SRGAP3-211ENST00000518265 MROH1Q8NDA8 1641 aa11.69□□□□□ -0.54
SRGAP3-211ENST00000518265 PLEKHG5O94827 1062 aa11.69□□□□□ -0.54
SRGAP3-211ENST00000518265 ARHGEF40Q8TER5 1519 aa11.69□□□□□ -0.54
SRGAP3-211ENST00000518265 PZPP20742 1482 aa11.69□□□□□ -0.54
SRGAP3-211ENST00000518265 DEPDC5O75140 1603 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms